CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
mitochondrion 3
cytosol 1
nucleus 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG22793	Sorghum	nucleus	92.04	91.38
Zm00001d044622_P002	Maize	mitochondrion	88.42	86.79
Zm00001d005072_P003	Maize	mitochondrion	84.8	80.83
TraesCS5B01G149400.1	Wheat	mitochondrion	76.12	77.13
HORVU5Hr1G047420.2	Barley	cytosol, mitochondrion, plastid	74.82	76.59
TraesCS5A01G150800.2	Wheat	mitochondrion	75.54	76.54
TraesCS5D01G155900.1	Wheat	mitochondrion	74.24	74.03
Os12t0108500-01	Rice	cytosol, plasma membrane, plastid	73.08	72.45
Os11t0108932-01	Rice	nucleus	31.55	69.87
GSMUA_Achr10P...	Banana	cytosol, nucleus, peroxisome	57.89	56.02
GSMUA_Achr7P22290_001	Banana	cytosol	57.02	55.03
VIT_08s0058g00700.t01	Wine grape	cytosol	51.09	53.24
PGSC0003DMT400030966	Potato	cytosol, plasma membrane, plastid	50.36	52.33
KRH76059	Soybean	cytosol, nucleus, peroxisome	50.8	52.31
Solyc10g076290.1.1	Tomato	cytosol	50.07	51.26
Bra005669.1-P	Field mustard	cytosol	48.63	50.3
KRH65525	Soybean	cytosol, peroxisome, plastid	51.23	50.0
AT5G01720.1	Thale cress	vacuole	48.05	49.92
CDY11182	Canola	cytosol, endoplasmic reticulum, nucleus	48.77	49.85
VIT_06s0004g07520.t01	Wine grape	cytosol	47.61	49.7
CDX80753	Canola	endoplasmic reticulum	47.9	48.96
KRH17127	Soybean	cytosol	45.3	48.01
KRH72766	Soybean	cytosol	35.31	45.35
KXG23663	Sorghum	cytosol	37.05	38.67
KXG29052	Sorghum	plastid	36.47	38.18
EES08900	Sorghum	cytosol	25.9	28.19
KXG30697	Sorghum	cytosol	15.77	25.83
EES04933	Sorghum	cytosol	12.74	25.21
EES09509	Sorghum	cytosol	13.75	24.61
EER90022	Sorghum	cytosol, plastid	20.84	23.0
EES06473	Sorghum	cytosol, peroxisome, plasma membrane	20.41	21.53
EES18256	Sorghum	cytosol, nucleus, plastid	11.43	21.41
EES03986	Sorghum	cytosol	11.58	21.0
OQU89081	Sorghum	cytosol	15.77	20.76
KXG26667	Sorghum	plastid	13.6	20.09

Protein Annotations

Gene3D:3.80.10.10	MapMan:35.1	EntrezGene:8067589	UniProt:C5Y321	EnsemblPlants:EES07863	ProteinID:EES07863
ProteinID:EES07863.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR001611	InterPro:IPR032675
InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_Cys-con_subtyp	PFAM:PF13516	PANTHER:PTHR44309	PANTHER:PTHR44309:SF3
SMART:SM00367	SMART:SM00368	EnsemblPlantsGene:SORBI_3005G007800	SUPFAM:SSF52047	unigene:Sbi.11527	UniParc:UPI0001A86056
RefSeq:XP_002448875.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr5:+:623227..627183

Molecular Weight (calculated)

74649.8 Da

IEP (calculated)

8.083

GRAVY (calculated)

0.164

Length

691 amino acids

Sequence
(BLAST)

001: MAAHQQQQHR HPKRRRLALS LSPSPTPAAA AAAPPLDSLA DELLFLVLDR VAQADPRALK SFALASRACH AAESRHRRVV RPLRADLLPA ALARYPCATR
101: LDLSLCARVP DAALASAVVS GSSSLRAVDL SRSRGFGSAG VAALAASCPG LADLDLSNGV DLGDAAAAEV ARAKGLRRLS LARWKPLTDM GLGCVAVGCM
201: ELRELSLKWC LGVSDLGIQL LALKCRKLTS LDLSYTMITK DSFPPIMKLP NLQELTLVGC IGIDDDALGS LQKECSKSLQ VLDLSHCQNI TDVGVSSILK
301: LVPNLFELDL SYCCPVTPSM VRSFQKIPKL RTLKLEGCKF MVDGLKAIGT SCVSLKELNL SKCSGMTDTE FSFAMSRLKN LLKLDITCCR NITDVSLAAM
401: TSSCTSLISL RMESCSRVSS GALQLIGKHC SHLEQLDLTD SDLDDEGLKA LSRCGKLSSL KIGICLKISD EGLTHIGRSC PNLRDIDLYR CGGLSDDGII
501: PIAQGCPMLE SINLSYCTEI TDRSLISLSK CTKLNTLEIR GCPMITSTGL SEIAMGCRLL SKLDIKKCFE VNDVGMLYLS QFSHSLREIN LSYCSVTDIG
601: LLSLSSISGL QNMTIVHLAG ITPNGLTATL MVCGCLTKVK LHEAFKSMMP PHMIKNVEAR GCVFQWIDKP FKVEVEPCDV WKQQSQDVLV R

Best Arabidopsis Sequence Match ( AT5G01720.1 )
(BLAST)

001: MKKVKQIRVL KPFDLLSEEL VFIILDLISP NPSDLKSFSL TCKSFYQLES KHRGSLKPLR SDYLPRILTR YRNTTDLDLT FCPRVTDYAL SVVGCLSGPT
101: LRSLDLSRSG SFSAAGLLRL ALKCVNLVEI DLSNATEMRD ADAAVVAEAR SLERLKLGRC KMLTDMGIGC IAVGCKKLNT VSLKWCVGVG DLGVGLLAVK
201: CKDIRTLDLS YLPITGKCLH DILKLQHLEE LLLEGCFGVD DDSLKSLRHD CKSLKKLDAS SCQNLTHRGL TSLLSGAGYL QRLDLSHCSS VISLDFASSL
301: KKVSALQSIR LDGCSVTPDG LKAIGTLCNS LKEVSLSKCV SVTDEGLSSL VMKLKDLRKL DITCCRKLSR VSITQIANSC PLLVSLKMES CSLVSREAFW
401: LIGQKCRLLE ELDLTDNEID DEGLKSISSC LSLSSLKLGI CLNITDKGLS YIGMGCSNLR ELDLYRSVGI TDVGISTIAQ GCIHLETINI SYCQDITDKS
501: LVSLSKCSLL QTFESRGCPN ITSQGLAAIA VRCKRLAKVD LKKCPSINDA GLLALAHFSQ NLKQINVSDT AVTEVGLLSL ANIGCLQNIA VVNSSGLRPS
601: GVAAALLGCG GLRKAKLHAS LRSLLPLSLI HHLEARGCAF LWKDNTLQAE LDPKYWKQQL EEMAP

Arabidopsis Description

FBL3F-box/LRR-repeat protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWU5]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.