CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d051219_P001	Maize	cytosol	92.65	93.77
TraesCS6B01G262900.1	Wheat	cytosol	78.91	79.86
TraesCS6D01G216400.1	Wheat	cytosol	78.67	79.62
HORVU6Hr1G059950.1	Barley	cytosol	78.2	79.14
TraesCS6A01G234100.2	Wheat	cytosol	77.96	78.9
Os02t0636400-01	Rice	cytosol	35.55	75.0
GSMUA_Achr5P19410_001	Banana	cytosol	62.32	61.88
GSMUA_Achr8P13910_001	Banana	mitochondrion	51.9	61.86
AT5G23340.1	Thale cress	cytosol	52.84	55.06
VIT_10s0071g00310.t01	Wine grape	cytosol	53.08	54.24
Bra009671.1-P	Field mustard	cytosol	51.66	53.83
CDX88014	Canola	cytosol	51.42	53.58
PGSC0003DMT400029999	Potato	cytosol	52.84	53.35
Solyc04g008980.2.1	Tomato	cytosol	52.84	53.1
Bra029367.1-P	Field mustard	cytosol	51.66	53.04
CDY46953	Canola	cytosol	51.66	53.04
CDY40798	Canola	cytosol	51.42	52.8
KRG90608	Soybean	cytosol	50.0	50.48
KRH36149	Soybean	cytosol	49.76	50.12
CDY45764	Canola	cytosol, peroxisome, plastid	51.42	37.22
KRH16153	Soybean	cytosol	21.09	35.89
CDY29091	Canola	plastid	14.69	35.84
EES04933	Sorghum	cytosol	18.96	22.92
EES03986	Sorghum	cytosol	19.19	21.26
EES18256	Sorghum	cytosol, nucleus, plastid	18.48	21.14
EES09509	Sorghum	cytosol	18.72	20.47
KXG23663	Sorghum	cytosol	30.81	19.64
KXG29052	Sorghum	plastid	29.15	18.64
OQU89081	Sorghum	cytosol	22.27	17.9
EES06473	Sorghum	cytosol, peroxisome, plasma membrane	26.3	16.95
EES08900	Sorghum	cytosol	24.64	16.38
EER90022	Sorghum	cytosol, plastid	23.93	16.13
KXG22793	Sorghum	nucleus	26.3	15.95
EES07863	Sorghum	nucleus	25.83	15.77
KXG26667	Sorghum	plastid	16.11	14.53

Protein Annotations

EnsemblPlants:KXG30697	EnsemblPlantsGene:SORBI_3004G225700	Gene3D:3.80.10.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_Cys-con_subtyp	PANTHER:PTHR45191
PFAM:PF13516	ProteinID:KXG30697	ProteinID:KXG30697.1	SEG:seg	SMART:SM00367	SUPFAM:SSF52047
UniParc:UPI0003C6BC85	UniProt:A0A194YR73	MapMan:35.1	:	:	:

Description

hypothetical protein

Coordinates

chr4:-:57577913..57580393

Molecular Weight (calculated)

45239.9 Da

IEP (calculated)

7.656

GRAVY (calculated)

0.105

Length

422 amino acids

Sequence
(BLAST)

001: MSAPPPAGGG GGGGSALINE VLTDDELRAV LTRLGPEAER DAFGLVCRRW LRIQSSERRR LRARAGPDML RRLAARFPGV LELDLSQSPS RSFYPGVIDD
101: DLSVIAGSFR NLRVLALQNC KGISDVGVTK LGDGLPSLQS LDVSRCIKLS DKGLKAVALG CKKLSQLQIM DCKLITDNLL TALSKSCLQL VELGAAGCNR
201: ITDAGICALA DGCHHIKSLD ISKCNKVSDP GVCKIAEVSS SCLVSIKLLD CSKVGDKSIY SLAKFCRSLE TLVISGCQNI SDASIQALAL ACSSSLRSLR
301: MDWCLKITDT SLQSLLSKCK LLVAIDVGCC DQITDDAFPD GEGYGFQSEL RVLKISSCVR LTVTGVSRLI EAFKALEYLD VRSCPQVTRD SCEQAGVQFP
401: VGCKVNFDGN LLESDPSAER FF

Best Arabidopsis Sequence Match ( AT5G23340.1 )
(BLAST)

001: MSSVCVNEAL TDDELRWVLS RLDSDKDKEV FGLVCKRWLN LQSTDRKKLA ARAGPHMLRR LASRFTQIVE LDLSQSISRS FYPGVTDSDL AVISEGFKFL
101: RVLNLHNCKG ITDTGLASIG RCLSLLQFLD VSYCRKLSDK GLSAVAEGCH DLRALHLAGC RFITDESLKS LSERCRDLEA LGLQGCTNIT DSGLADLVKG
201: CRKIKSLDIN KCSNVGDAGV SSVAKACASS LKTLKLLDCY KVGNESISSL AQFCKNLETL IIGGCRDISD ESIMLLADSC KDSLKNLRMD WCLNISDSSL
301: SCILKQCKNL EALDIGCCEE VTDTAFRDLG SDDVLGLKVL KVSNCTKITV TGIGKLLDKC SSLEYIDVRS LPHVTEVRCS EAGLEFPKCC KVNFSGSLTE
401: PDVLL

Arabidopsis Description

At5g23340/MKD15_20 [Source:UniProtKB/TrEMBL;Acc:Q9FMW7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.