Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400029999 | Potato | cytosol | 94.29 | 94.74 |
| VIT_10s0071g00310.t01 | Wine grape | cytosol | 70.48 | 71.67 |
| Bra009671.1-P | Field mustard | cytosol | 68.1 | 70.62 |
| CDX88014 | Canola | cytosol | 67.86 | 70.37 |
| AT5G23340.1 | Thale cress | cytosol | 67.86 | 70.37 |
| KRG90608 | Soybean | cytosol | 68.57 | 68.9 |
| CDY40798 | Canola | cytosol | 66.43 | 67.88 |
| KRH36149 | Soybean | cytosol | 67.62 | 67.78 |
| Bra029367.1-P | Field mustard | cytosol | 65.95 | 67.4 |
| CDY46953 | Canola | cytosol | 65.95 | 67.4 |
| GSMUA_Achr5P19410_001 | Banana | cytosol | 59.05 | 58.35 |
| GSMUA_Achr8P13910_001 | Banana | mitochondrion | 49.05 | 58.19 |
| TraesCS6D01G216400.1 | Wheat | cytosol | 55.24 | 55.64 |
| TraesCS6B01G262900.1 | Wheat | cytosol | 55.0 | 55.4 |
| HORVU6Hr1G059950.1 | Barley | cytosol | 54.76 | 55.16 |
| TraesCS6A01G234100.2 | Wheat | cytosol | 54.29 | 54.68 |
| Zm00001d051219_P001 | Maize | cytosol | 54.29 | 54.68 |
| KXG30697 | Sorghum | cytosol | 53.1 | 52.84 |
| Os02t0636400-01 | Rice | cytosol | 25.0 | 52.5 |
| CDY45764 | Canola | cytosol, peroxisome, plastid | 67.86 | 48.89 |
| KRH16153 | Soybean | cytosol | 28.57 | 48.39 |
| CDY29091 | Canola | plastid | 16.19 | 39.31 |
| Solyc06g007680.1.1 | Tomato | cytosol | 21.9 | 23.0 |
| Solyc06g005380.2.1 | Tomato | cytosol | 16.67 | 20.23 |
| Solyc01g099970.2.1 | Tomato | extracellular | 29.05 | 19.71 |
| Solyc04g063380.2.1 | Tomato | cytosol | 16.67 | 19.23 |
| Solyc10g076290.1.1 | Tomato | cytosol | 29.29 | 18.22 |
| Solyc06g030620.1.1 | Tomato | cytosol | 8.57 | 17.91 |
| Solyc06g054440.2.1 | Tomato | mitochondrion | 21.67 | 17.01 |
| Solyc02g092990.1.1 | Tomato | plastid | 21.19 | 16.18 |
| Solyc04g078490.1.1 | Tomato | cytosol | 20.24 | 15.92 |
| Solyc12g009560.1.1 | Tomato | cytosol | 23.57 | 15.54 |
| Solyc03g044220.1.1 | Tomato | cytosol | 20.24 | 15.48 |
| Solyc08g060810.2.1 | Tomato | plastid | 23.57 | 14.89 |
| Solyc06g049010.1.1 | Tomato | plastid | 21.9 | 14.84 |
| Solyc06g030610.1.1 | Tomato | cytosol | 9.52 | 14.6 |
| Solyc07g008250.2.1 | Tomato | cytosol, nucleus, peroxisome | 20.95 | 13.73 |
Protein Annotations
| EnsemblPlants:Solyc04g008980.2.1 | EnsemblPlantsGene:Solyc04g008980.2 | Gene3D:3.80.10.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR001611 | InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | InterPro:Leu-rich_rpt_Cys-con_subtyp | PANTHER:PTHR45191 |
| PFAM:PF13516 | SEG:seg | SMART:SM00367 | SUPFAM:SSF52047 | UniParc:UPI00027655C4 | UniProt:K4BP54 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr4:-:2567073..2569411
Molecular Weight (calculated)
45883.7 Da
IEP (calculated)
6.563
GRAVY (calculated)
0.018
Length
420 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGAGDDSHL QNDVVSVHCI NDSLGDDELR AVLSRLGDDK DKEVFGLVCK RWLRIQSTER KKLCARAGPH MLRRIASRFT RLHELDLSQS VSRSFYPGVT
101: DSDLSVIATA FSCLRILNLQ NCKGITDKGL AAIGSSLSSL QSLDVSYCRK ITDKGLSAVA EGCHDLRILH LSGCRFVSDS LMKALSENCH NVEEIGLQGC
201: TNITNSGLSV MVEGCRRIKH LDINKCINIG DIGISSVSEA CSLTLMTLKL LDCYKVGDDS ILSLANHCKN LETLVIGGCR NISDESMKSL AASCSNSLRK
301: LRMDWCLNIT DSSLDCILSK CRELEVLDIG CCEELTDAAF QQLGSDNFML GMKILKVSNC PKITVEGIKK LMKSCKFLEY LDVRSCPLIT KAGCEEAGIQ
401: FPESCKINFT GSLAEPDVLL
101: DSDLSVIATA FSCLRILNLQ NCKGITDKGL AAIGSSLSSL QSLDVSYCRK ITDKGLSAVA EGCHDLRILH LSGCRFVSDS LMKALSENCH NVEEIGLQGC
201: TNITNSGLSV MVEGCRRIKH LDINKCINIG DIGISSVSEA CSLTLMTLKL LDCYKVGDDS ILSLANHCKN LETLVIGGCR NISDESMKSL AASCSNSLRK
301: LRMDWCLNIT DSSLDCILSK CRELEVLDIG CCEELTDAAF QQLGSDNFML GMKILKVSNC PKITVEGIKK LMKSCKFLEY LDVRSCPLIT KAGCEEAGIQ
401: FPESCKINFT GSLAEPDVLL
001: MSSVCVNEAL TDDELRWVLS RLDSDKDKEV FGLVCKRWLN LQSTDRKKLA ARAGPHMLRR LASRFTQIVE LDLSQSISRS FYPGVTDSDL AVISEGFKFL
101: RVLNLHNCKG ITDTGLASIG RCLSLLQFLD VSYCRKLSDK GLSAVAEGCH DLRALHLAGC RFITDESLKS LSERCRDLEA LGLQGCTNIT DSGLADLVKG
201: CRKIKSLDIN KCSNVGDAGV SSVAKACASS LKTLKLLDCY KVGNESISSL AQFCKNLETL IIGGCRDISD ESIMLLADSC KDSLKNLRMD WCLNISDSSL
301: SCILKQCKNL EALDIGCCEE VTDTAFRDLG SDDVLGLKVL KVSNCTKITV TGIGKLLDKC SSLEYIDVRS LPHVTEVRCS EAGLEFPKCC KVNFSGSLTE
401: PDVLL
101: RVLNLHNCKG ITDTGLASIG RCLSLLQFLD VSYCRKLSDK GLSAVAEGCH DLRALHLAGC RFITDESLKS LSERCRDLEA LGLQGCTNIT DSGLADLVKG
201: CRKIKSLDIN KCSNVGDAGV SSVAKACASS LKTLKLLDCY KVGNESISSL AQFCKNLETL IIGGCRDISD ESIMLLADSC KDSLKNLRMD WCLNISDSSL
301: SCILKQCKNL EALDIGCCEE VTDTAFRDLG SDDVLGLKVL KVSNCTKITV TGIGKLLDKC SSLEYIDVRS LPHVTEVRCS EAGLEFPKCC KVNFSGSLTE
401: PDVLL
Arabidopsis Description
At5g23340/MKD15_20 [Source:UniProtKB/TrEMBL;Acc:Q9FMW7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.