Factsheet for PGSC0003DMT400029999

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc04g008980.2.1	Tomato	cytosol	94.74	94.29
VIT_10s0071g00310.t01	Wine grape	cytosol	72.01	72.88
Bra009671.1-P	Field mustard	cytosol	68.42	70.62
CDX88014	Canola	cytosol	68.18	70.37
KRG90608	Soybean	cytosol	70.1	70.1
AT5G23340.1	Thale cress	cytosol	67.7	69.88
KRH36149	Soybean	cytosol	69.14	68.97
CDY40798	Canola	cytosol	67.22	68.37
Bra029367.1-P	Field mustard	cytosol	66.75	67.88
CDY46953	Canola	cytosol	66.51	67.64
GSMUA_Achr5P19410_001	Banana	cytosol	58.85	57.88
GSMUA_Achr8P13910_001	Banana	mitochondrion	48.8	57.63
TraesCS6D01G216400.1	Wheat	cytosol	55.5	55.64
TraesCS6B01G262900.1	Wheat	cytosol	55.26	55.4
HORVU6Hr1G059950.1	Barley	cytosol	55.02	55.16
TraesCS6A01G234100.2	Wheat	cytosol	54.55	54.68
Zm00001d051219_P001	Maize	cytosol	54.55	54.68
KXG30697	Sorghum	cytosol	53.35	52.84
Os02t0636400-01	Rice	cytosol	24.4	51.0
CDY45764	Canola	cytosol, peroxisome, plastid	68.42	49.06
KRH16153	Soybean	cytosol	28.95	48.79
CDY29091	Canola	plastid	16.03	38.73
PGSC0003DMT400053176	Potato	cytosol	22.25	23.85
PGSC0003DMT400063955	Potato	cytosol, extracellular, nucleus	17.22	21.11
PGSC0003DMT400074998	Potato	cytosol	16.51	19.94
PGSC0003DMT400063732	Potato	cytosol	30.14	19.66
PGSC0003DMT400079115	Potato	cytosol	27.27	18.78
PGSC0003DMT400030966	Potato	cytosol, plasma membrane, plastid	29.19	18.35
PGSC0003DMT400094835	Potato	cytosol	9.81	16.73
PGSC0003DMT400042949	Potato	cytosol	21.53	16.3
PGSC0003DMT400064250	Potato	mitochondrion	21.29	16.18
PGSC0003DMT400089433	Potato	mitochondrion	17.7	16.12
PGSC0003DMT400007545	Potato	cytosol	23.92	15.7
PGSC0003DMT400008648	Potato	cytosol	6.22	15.57
PGSC0003DMT400053918	Potato	cytosol	20.33	15.48
PGSC0003DMT400040977	Potato	nucleus	23.92	14.95
PGSC0003DMT400079445	Potato	cytosol, nucleus, peroxisome	21.53	14.02
PGSC0003DMT400091765	Potato	cytosol	20.1	11.9

Protein Annotations

EnsemblPlants:PGSC0003DMT400029999	EnsemblPlantsGene:PGSC0003DMG400011513	EntrezGene:102585424	Gene3D:3.80.10.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_Cys-con_subtyp
PANTHER:PTHR45191	PFAM:PF13516	PGSC:PGSC0003DMG400011513	RefSeq:XP_006359273.1	SEG:seg	SMART:SM00367
SUPFAM:SSF52047	UniParc:UPI00029492EC	UniProt:M1ATN6	MapMan:35.1	:	:

Description

Glucose regulated repressor protein [Source:PGSC_GENE;Acc:PGSC0003DMG400011513]

Coordinates

chr4:-:4550187..4552600

Molecular Weight (calculated)

45801.5 Da

IEP (calculated)

6.378

GRAVY (calculated)

0.000

Length

418 amino acids

Sequence
(BLAST)

001: MASDDSHLQN DVVSVHCIND SLGDDELRAV LSRLGDDKDK EVFGLVCKRW LRIQSTERKK LCARAGPHML RKIAARFTRL HELDLSQSVS RSFYPGVTDS
101: DLSVIATAFS CLRILNLQNC KGITDNGLAA IGSSLSSLQS LDVSYCRKIT DKGLSAVAEG CHDLRTLHLA GCRFVSDSLM KALSKNCHYV EELGLQGCTN
201: ITNSGLSVLV EGCRRIKYLD INKCSNIGDI GITSVSEACS LTLRTLKLLD CYKVGDDSIL SLANYCKNLE TLVIGGCRNI SDEPMKSLAA SCSNSLRKLR
301: MDWCLNITDS SLDCIISKCR ELEVLDIGCC EELTDAAFQQ LGSENIMLGM KILKVSNCPK ITVEGIKKLM KSCEYLEYLD VRSCPLITKA GCEEAGIQFP
401: ESCKINFTGS LAEPDVLL

Best Arabidopsis Sequence Match ( AT5G23340.1 )
(BLAST)

001: MSSVCVNEAL TDDELRWVLS RLDSDKDKEV FGLVCKRWLN LQSTDRKKLA ARAGPHMLRR LASRFTQIVE LDLSQSISRS FYPGVTDSDL AVISEGFKFL
101: RVLNLHNCKG ITDTGLASIG RCLSLLQFLD VSYCRKLSDK GLSAVAEGCH DLRALHLAGC RFITDESLKS LSERCRDLEA LGLQGCTNIT DSGLADLVKG
201: CRKIKSLDIN KCSNVGDAGV SSVAKACASS LKTLKLLDCY KVGNESISSL AQFCKNLETL IIGGCRDISD ESIMLLADSC KDSLKNLRMD WCLNISDSSL
301: SCILKQCKNL EALDIGCCEE VTDTAFRDLG SDDVLGLKVL KVSNCTKITV TGIGKLLDKC SSLEYIDVRS LPHVTEVRCS EAGLEFPKCC KVNFSGSLTE
401: PDVLL

Arabidopsis Description

At5g23340/MKD15_20 [Source:UniProtKB/TrEMBL;Acc:Q9FMW7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.