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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • plastid 2
  • cytosol 2
  • nucleus 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:plastid
iPSORT:plastid
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc04g078490.1.1 Tomato cytosol 82.04 25.66
PGSC0003DMT400091765 Potato cytosol 83.83 19.83
Os04t0505700-01 Rice cytosol, mitochondrion 49.1 19.76
TraesCS2D01G358900.1 Wheat mitochondrion, plastid 49.7 18.82
GSMUA_Achr3P28280_001 Banana plastid 55.09 18.66
AT4G07400.1 Thale cress nucleus 61.68 18.59
AT1G47056.1 Thale cress cytosol, plastid 57.48 18.53
VIT_18s0001g09940.t01 Wine grape plastid 59.88 18.48
KRH15408 Soybean plastid 60.48 18.4
CDY43846 Canola plastid 56.29 18.29
Bra032213.1-P Field mustard plastid 56.29 18.29
CDY25663 Canola plastid 56.29 18.29
GSMUA_Achr8P15580_001 Banana cytosol 44.31 18.14
GSMUA_Achr4P12920_001 Banana plastid 55.09 18.0
GSMUA_Achr9P11380_001 Banana cytosol 47.31 17.63
KRH05631 Soybean plastid 59.28 17.58
GSMUA_Achr2P05250_001 Banana cytosol 50.3 17.28
PGSC0003DMT400064250 Potato mitochondrion 56.89 17.27
KXG26667 Sorghum plastid 47.31 16.88
PGSC0003DMT400053918 Potato cytosol 52.69 16.03
TraesCS2A01G359900.1 Wheat cytosol 50.3 15.53
Zm00001d003103_P001 Maize plastid 47.9 15.38
HORVU0Hr1G005070.1 Barley plastid 49.7 14.87
Zm00001d025812_P001 Maize plastid 47.31 14.47
Zm00001d025808_P001 Maize plastid 47.31 14.47
TraesCS5A01G161400.1 Wheat cytosol, plastid 41.92 13.28
TraesCS5B01G158800.1 Wheat plastid 41.92 13.28
TraesCS5D01G166300.1 Wheat cytosol, mitochondrion, peroxisome, plastid 41.92 13.28
OQU89081 Sorghum cytosol 40.72 12.95
HORVU5Hr1G050420.1 Barley plastid 41.92 12.68
Zm00001d019677_P001 Maize cytosol 38.92 12.38
GSMUA_Achr9P18840_001 Banana plastid 49.1 11.23
GSMUA_Achr9P22570_001 Banana plastid 27.54 10.45
Zm00001d037295_P001 Maize mitochondrion 13.17 9.02
Zm00001d028552_P001 Maize cytosol, extracellular, mitochondrion, plastid 10.18 7.66
Zm00001d039723_P001 Maize cytosol, extracellular, plastid 10.18 7.3
PGSC0003DMT400079115 Potato cytosol 23.95 6.59
PGSC0003DMT400007545 Potato cytosol 24.55 6.44
PGSC0003DMT400063732 Potato cytosol 23.95 6.24
PGSC0003DMT400029999 Potato cytosol 15.57 6.22
PGSC0003DMT400042949 Potato cytosol 20.36 6.16
PGSC0003DMT400079445 Potato cytosol, nucleus, peroxisome 22.16 5.76
PGSC0003DMT400040977 Potato nucleus 22.75 5.68
PGSC0003DMT400030966 Potato cytosol, plasma membrane, plastid 22.16 5.56
PGSC0003DMT400074998 Potato cytosol 11.38 5.49
PGSC0003DMT400053176 Potato cytosol 12.57 5.38
PGSC0003DMT400094835 Potato cytosol 7.19 4.9
PGSC0003DMT400063955 Potato cytosol, extracellular, nucleus 8.98 4.4
PGSC0003DMT400089433 Potato mitochondrion 5.39 1.96
Protein Annotations
EnsemblPlants:PGSC0003DMT400008648EnsemblPlantsGene:PGSC0003DMG400003351Gene3D:3.80.10.10InterPro:IPR032675InterPro:LRR_dom_sfPANTHER:PTHR44356
PANTHER:PTHR44356:SF2PGSC:PGSC0003DMG400003351SUPFAM:SSF52047UniParc:UPI000295296CUniProt:M0ZUV9MapMan:19.2.2.8.1.4.6
Description
Skip-2 [Source:PGSC_GENE;Acc:PGSC0003DMG400003351]
Coordinates
chr12:-:27754000..27754503
Molecular Weight (calculated)
18361.8 Da
IEP (calculated)
8.496
GRAVY (calculated)
0.075
Length
167 amino acids
Sequence
(BLAST)
001: MKRLHGITDG AVAEPIGPGV AGGSLRVICL KELYNGQCFG PLIIGSKSLR MLKLFRCSGD LDKIMKVIAE QVSELVEINL ERLQVSDTGL TAISKCSILE
101: ILHLMETPKC TNNGLNTVSQ NCKLLRKLHI DGWKTNKISD DGLIVVAKHC PNITNLKPIF SYQDFLN
Best Arabidopsis Sequence Match ( AT4G07400.1 )
(BLAST)
001: MNIYIFSKEK KRKKVVCDNL SKTRGSRREH CEPHRRRMGQ STSKFRRSKT TFTSPVLPNL REQNSGADEP YDYISNLPDE CLSLIFQSLT CADLKRCSLV
101: CRRWLTIEGQ CRHRLSLKAQ SDLISVIPSL FTRFDSVTKL VLRSDRRSLG ICDNAFVMIS VRCRNLTRLK LRGCPEISDL GIIGFTENCR SLKKVSFGSC
201: GFGVKGMNAL LNTCLGLEEL SVKRLRGIGA GAELIGPGGA AGSLKVICLK ELHNGQCFAP LLSGAKGLRI LKIFRCSGDW DRVFEAVRDK VNAIVEIHLE
301: RIQMSDLGLT ALSKCSGVEV LHLVKTPDCT NVGLALVAER CKLLRKLHID GWKTNRIGDE GLIVVAKYCW NLQELVLIGV NPTKLSLEAI VSNCLNLERL
401: ALCGSDTVGD TELCCIAEKC LALRKLCIKN CPITDDGIKA LGNGCPNLLK VKVKKCRGVT TQGADLLRKR RALLVVNLDA PETPIVEGSV GEGGAQENAV
501: EFPPSRLQIP TIGLASGSTS RSSSFKLRLG FLSQRNFVSC ALRRLGSRSR SRNE
Arabidopsis Description
FBL8Putative F-box/LRR-repeat protein 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9S9X4]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.