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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 5
  • cytosol 1
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra032213.1-P Field mustard plastid 99.81 99.81
CDY25663 Canola plastid 98.25 98.25
AT1G47056.1 Thale cress cytosol, plastid 83.27 82.63
Solyc04g078490.1.1 Tomato cytosol 63.42 61.05
VIT_18s0001g09940.t01 Wine grape plastid 63.23 60.07
KRH15408 Soybean plastid 62.45 58.47
PGSC0003DMT400008648 Potato cytosol 18.29 56.29
KRH05631 Soybean plastid 61.48 56.13
GSMUA_Achr3P28280_001 Banana plastid 50.0 52.13
GSMUA_Achr4P12920_001 Banana plastid 49.81 50.1
CDX81326 Canola cytosol 50.97 50.0
CDY18646 Canola cytosol 50.0 49.05
GSMUA_Achr2P05250_001 Banana cytosol 46.3 48.97
CDX83114 Canola cytosol 47.28 48.89
GSMUA_Achr9P22570_001 Banana plastid 41.63 48.64
CDX68575 Canola cytosol 48.05 48.34
GSMUA_Achr8P15580_001 Banana cytosol 37.55 47.3
OQU89081 Sorghum cytosol 48.25 47.24
GSMUA_Achr9P11380_001 Banana cytosol 41.05 47.1
Os04t0505700-01 Rice cytosol, mitochondrion 37.74 46.75
TraesCS5A01G161400.1 Wheat cytosol, plastid 47.86 46.68
TraesCS5B01G158800.1 Wheat plastid 47.67 46.49
TraesCS5D01G166300.1 Wheat cytosol, mitochondrion, peroxisome, plastid 47.67 46.49
Zm00001d019677_P001 Maize cytosol 47.28 46.29
TraesCS2D01G358900.1 Wheat mitochondrion, plastid 38.72 45.12
HORVU5Hr1G050420.1 Barley plastid 47.86 44.57
Zm00001d003103_P001 Maize plastid 44.94 44.42
KXG26667 Sorghum plastid 40.27 44.23
PGSC0003DMT400091765 Potato cytosol 59.73 43.48
Zm00001d025812_P001 Maize plastid 45.72 43.04
Zm00001d025808_P001 Maize plastid 45.33 42.67
TraesCS2A01G359900.1 Wheat cytosol 43.58 41.4
HORVU0Hr1G005070.1 Barley plastid 43.58 40.14
GSMUA_Achr9P18840_001 Banana plastid 48.44 34.11
CDY01426 Canola cytosol 52.33 24.84
CDY12824 Canola nucleus 52.53 24.77
CDX88014 Canola cytosol 17.51 22.22
CDY46953 Canola cytosol 17.12 21.41
CDY40798 Canola cytosol 16.73 20.92
CDX71945 Canola cytosol 12.84 18.7
CDY06032 Canola cytosol 12.65 18.41
CDY09760 Canola cytosol 22.37 18.34
CDX90588 Canola cytosol 22.37 18.28
CDX87090 Canola cytosol 21.79 18.18
CDY19807 Canola cytosol 21.6 18.02
CDY35358 Canola cytosol 21.79 17.98
CDX88173 Canola cytosol 21.6 17.85
CDX80503 Canola cytosol 21.4 17.71
CDX76980 Canola cytosol 20.04 17.2
CDX87549 Canola cytosol 11.67 16.9
CDX79184 Canola cytosol 11.67 16.71
CDX68067 Canola cytosol 11.67 16.71
CDX88336 Canola cytosol 10.51 16.67
CDX88253 Canola cytosol 20.62 16.56
CDY19741 Canola cytosol 19.84 16.53
CDY28039 Canola cytosol 12.45 16.41
CDX80608 Canola cytosol 20.43 16.41
CDY67973 Canola plasma membrane 11.48 16.3
CDX96592 Canola cytosol 11.48 16.3
CDX80753 Canola endoplasmic reticulum 21.4 16.27
CDY35942 Canola cytosol 12.45 16.2
CDY29091 Canola plastid 5.45 16.18
CDY11182 Canola cytosol, endoplasmic reticulum, nucleus 20.82 15.83
CDY53337 Canola cytosol 19.65 15.81
CDY45764 Canola cytosol, peroxisome, plastid 17.32 15.27
CDY58588 Canola extracellular 3.7 14.39
Zm00001d037295_P001 Maize mitochondrion 6.81 14.34
CDY58589 Canola extracellular 3.5 13.74
Zm00001d028552_P001 Maize cytosol, extracellular, mitochondrion, plastid 5.84 13.51
Zm00001d039723_P001 Maize cytosol, extracellular, plastid 5.84 12.88
Protein Annotations
Gene3D:1.20.1280.50MapMan:19.2.2.8.1.4.6Gene3D:3.80.10.10UniProt:A0A078I208EnsemblPlants:CDY43846ProteinID:CDY43846
ProteinID:CDY43846.1InterPro:F-box_domGO:GO:0003674GO:GO:0005488GO:GO:0005515EnsemblPlantsGene:GSBRNA2T00077372001
InterPro:IPR001810InterPro:IPR032675InterPro:LRR_dom_sfInterPro:Leu-rich_rpt_Cys-con_subtypPFAM:PF12937PANTHER:PTHR44356
PANTHER:PTHR44356:SF2SMART:SM00367SUPFAM:SSF52047UniParc:UPI0004EEE635SEG:seg:
Description
BnaA05g18580DBnaA05g18580D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I208]
Coordinates
chrLK032570:+:12538..14082
Molecular Weight (calculated)
56063.6 Da
IEP (calculated)
8.437
GRAVY (calculated)
0.025
Length
514 amino acids
Sequence
(BLAST)
001: MGQSTSAAGK IILNGRRTKL LSSNSSIETE VSPDYTSYIP DECLALVFQF LNSGNRKRCA LVCRRWMIVE GRNRHRLSLH ARSALITWIP SLFSRFDSVV
101: KLSLKCDRRS VSINDEALAM ISLRCRNLKR LKLRACRELT YKGMATFAEN CKGLNILSCG SCDFGAEGVK AVLDHCSSLE ELSIKRLRNF TDLSHEPIGP
201: GLAASSLKSI CLKELYIGEC FGPVIAGAKN LRSLKLFRCS GDWDMVLEEM AVKEHGIVEI HLERMQVTDV ALAAISNCSS LEILHLVKTP ECTNGGLAGI
301: AEKCKCLRKL HIDGWKANLI GDEGLVAVAK FCSKLQELVL IGVNPTTLSL AMLAVKCQNL ERLALCGCDT FGDPELSCIA AKCPSLRKLC IKNCPISDLG
401: IENLANGCPG LIKVKIKKCR GVMGGCADWL RTVRPMLSVN ADTVEPEGHE EGSNDAVEGG LQENRIEFPS LNSQIVAPSL ASSSRSRSGY FKSRVGLFSG
501: ISLVACTLRQ RESS
Best Arabidopsis Sequence Match ( AT1G47056.1 )
(BLAST)
001: MGQSTSAAGN SILNRRRSKS FTLKFPIESI ESEISQPDYT SSLPDECLAL VFQFLNSGNR KRCALVCRRW MIVEGQNRYR LSLHARSDLI TSIPSLFSRF
101: DSVTKLSLKC DRRSVSIGDE ALVKISLRCR NLKRLKLRAC RELTDVGMAA FAENCKDLKI FSCGSCDFGA KGVKAVLDHC SNLEELSIKR LRGFTDIAPE
201: MIGPGVAASS LKSICLKELY NGQCFGPVIV GAKNLKSLKL FRCSGDWDLL LQEMSGKDHG VVEIHLERMQ VSDVALSAIS YCSSLESLHL VKTPECTNFG
301: LAAIAEKCKR LRKLHIDGWK ANLIGDEGLV AVAKFCSQLQ ELVLIGVNPT TLSLGMLAAK CLNLERLALC GCDTFGDPEL SCIAAKCPAL RKLCIKNCPI
401: SDVGIENLAN GCPGLTKVKI KKCKGVLGGC ADWLRTVRPM LSVNADTMEQ EHEEAASNDV VGGSQENGIE FPQLNSQIMA SSIASSSRNR SGYFKSGIGL
501: FSGMSLVPCT SRQRRASR
Arabidopsis Description
VFB1F-box protein At1g47056 [Source:UniProtKB/Swiss-Prot;Acc:Q9C626]
SUBAcon: [cytosol,plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.