Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra029656.1-P | Field mustard | cytosol | 95.95 | 95.95 |
| CDY28039 | Canola | cytosol | 92.15 | 93.33 |
| AT3G07550.2 | Thale cress | cytosol | 81.77 | 81.77 |
| KRH47976 | Soybean | cytosol | 53.67 | 54.64 |
| PGSC0003DMT400053176 | Potato | cytosol | 52.15 | 52.82 |
| Solyc06g007680.1.1 | Tomato | cytosol | 51.9 | 51.25 |
| GSMUA_Achr8P28940_001 | Banana | cytosol | 46.84 | 48.68 |
| Os11t0264200-01 | Rice | cytosol | 42.78 | 44.36 |
| HORVU4Hr1G014630.1 | Barley | cytosol | 41.77 | 42.75 |
| EES09509 | Sorghum | cytosol | 41.27 | 42.23 |
| TraesCS4D01G083300.1 | Wheat | cytosol | 41.01 | 41.97 |
| TraesCS4B01G085300.2 | Wheat | plastid | 38.23 | 37.28 |
| TraesCS4A01G230600.2 | Wheat | plastid | 37.97 | 37.04 |
| Zm00001d007294_P001 | Maize | cytosol | 37.97 | 36.95 |
| CDX88014 | Canola | cytosol | 21.01 | 20.49 |
| CDY46953 | Canola | cytosol | 20.25 | 19.46 |
| CDY40798 | Canola | cytosol | 20.0 | 19.22 |
| CDY58589 | Canola | extracellular | 5.57 | 16.79 |
| CDY09760 | Canola | cytosol | 24.56 | 15.47 |
| CDX88336 | Canola | cytosol | 12.66 | 15.43 |
| CDX90588 | Canola | cytosol | 24.56 | 15.42 |
| CDY58588 | Canola | extracellular | 5.06 | 15.15 |
| CDX87549 | Canola | cytosol | 13.42 | 14.93 |
| CDX96592 | Canola | cytosol | 13.67 | 14.92 |
| CDY67973 | Canola | plasma membrane | 13.67 | 14.92 |
| CDX79184 | Canola | cytosol | 13.42 | 14.76 |
| CDX83114 | Canola | cytosol | 18.48 | 14.69 |
| CDY53337 | Canola | cytosol | 23.54 | 14.55 |
| CDX88253 | Canola | cytosol | 23.54 | 14.53 |
| CDX68067 | Canola | cytosol | 13.16 | 14.48 |
| CDX80608 | Canola | cytosol | 23.29 | 14.38 |
| CDX68575 | Canola | cytosol | 18.48 | 14.29 |
| CDY45764 | Canola | cytosol, peroxisome, plastid | 21.01 | 14.24 |
| CDX80753 | Canola | endoplasmic reticulum | 24.3 | 14.2 |
| CDY19741 | Canola | cytosol | 22.03 | 14.1 |
| CDY11182 | Canola | cytosol, endoplasmic reticulum, nucleus | 24.05 | 14.05 |
| CDY18646 | Canola | cytosol | 18.23 | 13.74 |
| CDY19807 | Canola | cytosol | 21.27 | 13.64 |
| CDX87090 | Canola | cytosol | 21.27 | 13.64 |
| CDX81326 | Canola | cytosol | 17.97 | 13.55 |
| CDY35358 | Canola | cytosol | 21.01 | 13.32 |
| CDX88173 | Canola | cytosol | 20.51 | 13.02 |
| CDX76980 | Canola | cytosol | 19.75 | 13.02 |
| CDY25663 | Canola | plastid | 16.71 | 12.84 |
| CDX80503 | Canola | cytosol | 20.0 | 12.72 |
| CDY43846 | Canola | plastid | 16.2 | 12.45 |
| CDY29091 | Canola | plastid | 5.32 | 12.14 |
| CDY06032 | Canola | cytosol | 10.63 | 11.9 |
| CDX71945 | Canola | cytosol | 10.63 | 11.9 |
| CDY12824 | Canola | nucleus | 18.73 | 6.79 |
| CDY01426 | Canola | cytosol | 18.48 | 6.74 |
Protein Annotations
| EnsemblPlants:CDY35942 | EnsemblPlantsGene:GSBRNA2T00059496001 | Gene3D:3.80.10.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR001611 | InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | InterPro:Leu-rich_rpt_Cys-con_subtyp | PANTHER:PTHR44001 |
| PANTHER:PTHR44001:SF1 | PFAM:PF13516 | ProteinID:CDY35942 | ProteinID:CDY35942.1 | SEG:seg | SMART:SM00367 |
| SUPFAM:SSF52047 | UniParc:UPI0004EE617E | UniProt:A0A078HDP9 | MapMan:35.1 | : | : |
Description
BnaA05g30080DBnaA05g30080D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HDP9]
Coordinates
chrLK032364:+:75436..77030
Molecular Weight (calculated)
43384.7 Da
IEP (calculated)
7.898
GRAVY (calculated)
0.135
Length
395 amino acids
Sequence
(BLAST)
(BLAST)
001: MENVAESDDV RTSIIHLPDD CLSFIFQRLD NLDDHDSFGL ACHRFLNIQN INRRSLQFQC SLSLLIPSSL SQPTLAVNSD HLHRLLTRFQ WLEHLSLSGC
101: TVLNDSSLAS LRYPGARLRS LHLDCCYGVS DDGISTVASF CPNLRVVSLY RCSISDIGLE TLARAASLAL RCVNLSYCPL VSDFGVKALT QACLQIESVK
201: ISNCKSITGV GFINSSPTLS YVDAESCQLE PKGVAGIVSG GGIEFLNISG AVSYIGKDGL VPIGSGVASK LRVLNLRMCR TVGDESIKAI ARGCPLLQEW
301: NLALCHEVRV EGWVAVGKWC CSLKILHVNR CRNLCDQGLL GIRRGCKNLR ILHMNGNARL TTTAIEMFKL HRGDVTLRSE EVMVIGPDWR LYTRG
101: TVLNDSSLAS LRYPGARLRS LHLDCCYGVS DDGISTVASF CPNLRVVSLY RCSISDIGLE TLARAASLAL RCVNLSYCPL VSDFGVKALT QACLQIESVK
201: ISNCKSITGV GFINSSPTLS YVDAESCQLE PKGVAGIVSG GGIEFLNISG AVSYIGKDGL VPIGSGVASK LRVLNLRMCR TVGDESIKAI ARGCPLLQEW
301: NLALCHEVRV EGWVAVGKWC CSLKILHVNR CRNLCDQGLL GIRRGCKNLR ILHMNGNARL TTTAIEMFKL HRGDVTLRSE EVMVIGPDWR LYTRG
001: MEDVSESDNN VETSIIHLPD DCLSFIFQRL DSVADHDSFG LTCHRWLNIQ NISRRSLQFQ CSFSVLNPSS LSQTNPDVSS HHLHRLLTRF QWLEHLSLSG
101: CTVLNDSSLD SLRYPGARLH TLYLDCCFGI SDDGISTIAS FCPNLSVVSL YRCNISDIGL ETLARASLSL KCVNLSYCPL VSDFGIKALS QACLQLESVK
201: ISNCKSITGV GFSGCSPTLG YVDADSCQLE PKGITGIISG GGIEFLNISG VSCYIRKDGL VPIGSGIASK LRILNLRMCR TVGDESIEAI AKGCPLLQEW
301: NLALCHEVKI SGWEAVGKWC RNLKKLHVNR CRNLCDQGLL ALRCGCMNLQ ILYMNGNARL TPTAIEMFRL HRADITLRTE EMMVIGPDWR LYAQE
101: CTVLNDSSLD SLRYPGARLH TLYLDCCFGI SDDGISTIAS FCPNLSVVSL YRCNISDIGL ETLARASLSL KCVNLSYCPL VSDFGIKALS QACLQLESVK
201: ISNCKSITGV GFSGCSPTLG YVDADSCQLE PKGITGIISG GGIEFLNISG VSCYIRKDGL VPIGSGIASK LRILNLRMCR TVGDESIEAI AKGCPLLQEW
301: NLALCHEVKI SGWEAVGKWC RNLKKLHVNR CRNLCDQGLL ALRCGCMNLQ ILYMNGNARL TPTAIEMFRL HRADITLRTE EMMVIGPDWR LYAQE
Arabidopsis Description
FBL12F-box/LRR-repeat protein 12 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRR1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.