CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra012785.1-P	Field mustard	cytosol	98.73	98.89
CDY09760	Canola	cytosol	97.3	97.61
AT4G15475.1	Thale cress	cytosol	79.81	82.3
PGSC0003DMT400079115	Potato	cytosol	65.18	67.55
KRH02152	Soybean	cytosol	61.21	65.92
Solyc06g054440.2.1	Tomato	mitochondrion	55.8	65.61
KRH20947	Soybean	cytosol, nucleus, peroxisome	62.96	65.24
VIT_05s0020g02400.t01	Wine grape	cytosol	63.27	65.14
KRH11333	Soybean	cytosol	37.68	60.61
KRH50979	Soybean	cytosol	31.8	56.98
GSMUA_Achr3P22880_001	Banana	cytosol	55.48	54.53
Zm00001d007640_P001	Maize	cytosol	48.97	49.04
EES08900	Sorghum	cytosol	48.81	48.35
TraesCS4D01G148000.1	Wheat	cytosol	47.38	47.68
TraesCS4A01G142500.3	Wheat	plastid	44.52	44.52
Os11t0641200-01	Rice	cytosol	23.05	40.5
Os10t0148800-01	Rice	cytosol	25.44	32.13
CDY46953	Canola	cytosol	19.24	29.44
CDX88014	Canola	cytosol	18.92	29.38
CDY40798	Canola	cytosol	18.76	28.71
CDY28039	Canola	cytosol	15.58	25.13
CDY19807	Canola	cytosol	24.32	24.84
CDX87090	Canola	cytosol	24.17	24.68
CDY35942	Canola	cytosol	15.42	24.56
CDX88173	Canola	cytosol	24.01	24.28
CDY35358	Canola	cytosol	24.01	24.24
CDX80608	Canola	cytosol	24.64	24.22
CDY06032	Canola	cytosol	13.51	24.08
CDX88253	Canola	cytosol	24.48	24.06
CDX80503	Canola	cytosol	23.53	23.83
CDY19741	Canola	cytosol	23.37	23.82
CDX71945	Canola	cytosol	13.35	23.8
CDX80753	Canola	endoplasmic reticulum	25.44	23.67
CDY11182	Canola	cytosol, endoplasmic reticulum, nucleus	25.28	23.52
CDY53337	Canola	cytosol	23.85	23.47
CDX88336	Canola	cytosol	12.08	23.46
CDX76980	Canola	cytosol	22.26	23.37
CDY67973	Canola	plasma membrane	13.04	22.65
CDY25663	Canola	plastid	18.44	22.57
CDX87549	Canola	cytosol	12.72	22.54
CDX96592	Canola	cytosol	12.88	22.38
CDY43846	Canola	plastid	18.28	22.37
CDX79184	Canola	cytosol	12.72	22.28
CDX68067	Canola	cytosol	12.72	22.28
CDX83114	Canola	cytosol	17.33	21.93
CDX81326	Canola	cytosol	17.81	21.37
CDY18646	Canola	cytosol	17.81	21.37
CDX68575	Canola	cytosol	17.01	20.94
CDY45764	Canola	cytosol, peroxisome, plastid	18.92	20.41
CDY58589	Canola	extracellular	4.13	19.85
CDY29091	Canola	plastid	5.41	19.65
CDY58588	Canola	extracellular	3.97	18.94
CDY01426	Canola	cytosol	18.6	10.8
CDY12824	Canola	nucleus	18.6	10.73

Protein Annotations

Gene3D:1.20.1280.50	Gene3D:3.80.10.10	MapMan:35.1	EnsemblPlants:CDX90588	ProteinID:CDX90588	ProteinID:CDX90588.1
InterPro:F-box-like_dom_sf	InterPro:F-box_dom	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSBRNA2T00151225001
InterPro:IPR001611	InterPro:IPR001810	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_Cys-con_subtyp
PFAM:PF12937	PFAM:PF13516	PANTHER:PTHR45517	SMART:SM00256	SMART:SM00367	SUPFAM:SSF52047
SUPFAM:SSF81383	UniParc:UPI0004EED2BC	SEG:seg	:	:	:

Description

BnaA03g41930D

Coordinates

chrLK031863:-:974703..977676

Molecular Weight (calculated)

67942.3 Da

IEP (calculated)

8.448

GRAVY (calculated)

0.164

Length

629 amino acids

Sequence
(BLAST)

001: MRGRDLINNG LPDELILEIF QRLDSKPTRD ACSLVCKRWL NLERFSRTTL RIGASFSPDT IVTLLSRRFL HITSIHVDER LSLSLSLPPP PLPLKRKRGS
101: KTSSSSSSSA SSSKRRKLSN KTRSGGAENA ESCSLTDAGV IALANGFPLI ENLSLIWCPN VSSFGLRSLA QICTSLRSLD LQGCFVGDQG LSAVGKFCKH
201: LEELNLRFCE GLTDVGVIDL VLGCAKSLKS IGVAASAKVT DLSLEAVGSH CKLLEVLFLD SECIHDKGVV AVVKGCRRLK SLKLQCVNVT DAAFSVVGDF
301: CVSLEILALY SFQQFTDKGM KSIGKGCKNL KDLTLSDCYF VSCDGLEAIA HGCKELTRIE INGCHNIGTR GLEAVGKSCA RLIELYLLYC QRIGNSALYQ
401: IGKGCKSLET LHLVDCAGIG DAAMCSIAKG CRNLKKLHIR RCYEADNLHI LFSMVGNKGV IAIGKNCKLL TELSLRFCDK VGDAALVAVG KGCSFLQQLN
501: VSGCHLIGDV GITAIAKGCP QLTHLDISVL QKVGDASLSE LGDGCPMLKD LVLSHCHYVT DNGLNHLVNK CKLLETSHMV YCPGITSAGV ATVVSSCSHI
601: KKVLIEKWKV SERTMRRAGS ILSYLCMDL

Best Arabidopsis Sequence Match ( AT4G15475.1 )
(BLAST)

001: MRGHDRINNC LPEELILEIF RRLESKPNRD ACSLVCKRWL SLERFSRTTL RIGASFSPDD FISLLSRRFL YITSIHVDER ISVSLPSLSP SPKRKRGRDS
101: SSPSSSKRKK LTDKTHSGAE NVESSSLTDT GLTALANGFP RIENLSLIWC PNVSSVGLCS LAQKCTSLKS LDLQGCYVGD QGLAAVGKFC KQLEELNLRF
201: CEGLTDVGVI DLVVGCSKSL KSIGVAASAK ITDLSLEAVG SHCKLLEVLY LDSEYIHDKG LIAVAQGCHR LKNLKLQCVS VTDVAFAAVG ELCTSLERLA
301: LYSFQHFTDK GMRAIGKGSK KLKDLTLSDC YFVSCKGLEA IAHGCKELER VEINGCHNIG TRGIEAIGKS CPRLKELALL YCQRIGNSAL QEIGKGCKSL
401: EILHLVDCSG IGDIAMCSIA KGCRNLKKLH IRRCYEIGNK GIISIGKHCK SLTELSLRFC DKVGNKALIA IGKGCSLQQL NVSGCNQISD AGITAIARGC
501: PQLTHLDISV LQNIGDMPLA ELGEGCPMLK DLVLSHCHHI TDNGLNHLVQ KCKLLETCHM VYCPGITSAG VATVVSSCPH IKKVLIEKWK VTERTTRRAG
601: SVISYLCMDL

Arabidopsis Description

FBL4F-box/LRR-repeat protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9C5D2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.