Factsheet for Bra012785.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX90588	Canola	cytosol	98.89	98.73
AT4G15475.1	Thale cress	cytosol	79.62	81.97
PGSC0003DMT400079115	Potato	cytosol	64.81	67.05
KRH02152	Soybean	cytosol	61.31	65.92
Solyc06g054440.2.1	Tomato	mitochondrion	55.41	65.05
VIT_05s0020g02400.t01	Wine grape	cytosol	63.22	64.98
KRH20947	Soybean	cytosol, nucleus, peroxisome	62.58	64.74
KRH11333	Soybean	cytosol	37.42	60.1
KRH50979	Soybean	cytosol	31.53	56.41
GSMUA_Achr3P22880_001	Banana	cytosol	55.1	54.06
Zm00001d007640_P001	Maize	cytosol	48.89	48.89
EES08900	Sorghum	cytosol	48.73	48.19
TraesCS4D01G148000.1	Wheat	cytosol	47.61	47.84
TraesCS4A01G142500.3	Wheat	plastid	44.43	44.36
Os11t0641200-01	Rice	cytosol	22.77	39.94
Os10t0148800-01	Rice	cytosol	25.48	32.13
Bra009671.1-P	Field mustard	cytosol	19.11	29.63
Bra029367.1-P	Field mustard	cytosol	18.95	28.95
Bra036542.1-P	Field mustard	cytosol	24.2	24.68
Bra029656.1-P	Field mustard	cytosol	15.29	24.3
Bra034254.1-P	Field mustard	cytosol	23.73	23.95
Bra005669.1-P	Field mustard	cytosol	25.16	23.65
Bra009835.1-P	Field mustard	cytosol	23.41	23.63
Bra009931.1-P	Field mustard	cytosol	24.04	23.59
Bra036607.1-P	Field mustard	cytosol	23.25	22.85
Bra016422.1-P	Field mustard	cytosol	12.74	22.66
Bra015699.1-P	Field mustard	cytosol	12.74	22.6
Bra003692.1-P	Field mustard	cytosol	12.9	22.56
Bra032213.1-P	Field mustard	plastid	17.99	21.98
Bra007401.1-P	Field mustard	cytosol	8.44	21.54
Bra029994.1-P	Field mustard	cytosol	17.52	21.53
Bra037120.1-P	Field mustard	cytosol	17.99	21.48

Protein Annotations

Gene3D:1.20.1280.50	Gene3D:3.80.10.10	MapMan:35.1	EnsemblPlantsGene:Bra012785	EnsemblPlants:Bra012785.1	EnsemblPlants:Bra012785.1-P
InterPro:F-box-like_dom_sf	InterPro:F-box_dom	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR001611
InterPro:IPR001810	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_Cys-con_subtyp	UniProt:M4D8H5
PFAM:PF12937	PFAM:PF13516	PANTHER:PTHR45517	SMART:SM00256	SMART:SM00367	SUPFAM:SSF52047
SUPFAM:SSF81383	UniParc:UPI00025407D8	SEG:seg	:	:	:

Description

AT4G15475 (E=2e-281) | F-box family protein (FBL4)

Coordinates

chrA03:+:22282902..22285399

Molecular Weight (calculated)

67868.0 Da

IEP (calculated)

8.404

GRAVY (calculated)

0.150

Length

628 amino acids

Sequence
(BLAST)

001: MRGRDLINNG LPDELILEIF QRLDSKPTRD ACSLVCKRWL NLERFSRTTL RIGASFSPDT IVTLLSRRFL HITSIHVDER LSLSLPPPPL PLKRKRASKT
101: SSSSSSSSAS SSKRRKLSNK TRSGGAENAE SCSLTDAGVI ALANGFPLIE NLSLIWCPNV SSFGLRSLAQ ICTSLRSLDL QGCFVGDQGL SAVGKFCNHL
201: EELNLRFCEG LTDVGVIDLV LGCAKSLKSI GVAASAKVTD LSLEAVGSHC KLLEVLFLDS ECIHDKGVVA VVKGCRRLRS LKLQCVNVTD AAFSVVGDFC
301: VSLEILALYS FQQFTDKGMK SIGKGCKNLK DLTLSDCYFV SCDGLEAIAH GCKELTRIEI NGCHNIGTRG LEAVGKSCAR LTELYLLYCQ RIGNSALYQI
401: GKGCKSLETL HLVDCAGIGD AAMCSIAKGC RNLKKLHIRR CYEADYLHIL FSMVGNKGVI AIGKNCKSLT ELSLRFCDKV GDAALVAVGK GCSFLQQLNV
501: SGCHLIGDVG ITAIAKGCPQ LTHLDISVLQ KVGDASLSEL GDGCPMLKDL VLSHCHYVTD NGLNHLVNKC KLLETSHMVY CPGITSAGVA TVVSSCSHIK
601: KVLIEKWKVS ERTMRRAGSI LSYLCMDL

Best Arabidopsis Sequence Match ( AT4G15475.1 )
(BLAST)

001: MRGHDRINNC LPEELILEIF RRLESKPNRD ACSLVCKRWL SLERFSRTTL RIGASFSPDD FISLLSRRFL YITSIHVDER ISVSLPSLSP SPKRKRGRDS
101: SSPSSSKRKK LTDKTHSGAE NVESSSLTDT GLTALANGFP RIENLSLIWC PNVSSVGLCS LAQKCTSLKS LDLQGCYVGD QGLAAVGKFC KQLEELNLRF
201: CEGLTDVGVI DLVVGCSKSL KSIGVAASAK ITDLSLEAVG SHCKLLEVLY LDSEYIHDKG LIAVAQGCHR LKNLKLQCVS VTDVAFAAVG ELCTSLERLA
301: LYSFQHFTDK GMRAIGKGSK KLKDLTLSDC YFVSCKGLEA IAHGCKELER VEINGCHNIG TRGIEAIGKS CPRLKELALL YCQRIGNSAL QEIGKGCKSL
401: EILHLVDCSG IGDIAMCSIA KGCRNLKKLH IRRCYEIGNK GIISIGKHCK SLTELSLRFC DKVGNKALIA IGKGCSLQQL NVSGCNQISD AGITAIARGC
501: PQLTHLDISV LQNIGDMPLA ELGEGCPMLK DLVLSHCHHI TDNGLNHLVQ KCKLLETCHM VYCPGITSAG VATVVSSCPH IKKVLIEKWK VTERTTRRAG
601: SVISYLCMDL

Arabidopsis Description

FBL4F-box/LRR-repeat protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9C5D2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.