Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY09760 | Canola | cytosol | 83.11 | 80.86 |
| CDX90588 | Canola | cytosol | 82.3 | 79.81 |
| Bra012785.1-P | Field mustard | cytosol | 81.97 | 79.62 |
| KRH02152 | Soybean | cytosol | 66.56 | 69.52 |
| PGSC0003DMT400079115 | Potato | cytosol | 67.54 | 67.87 |
| VIT_05s0020g02400.t01 | Wine grape | cytosol | 67.54 | 67.43 |
| KRH20947 | Soybean | cytosol, nucleus, peroxisome | 66.23 | 66.56 |
| Solyc06g054440.2.1 | Tomato | mitochondrion | 58.2 | 66.36 |
| KRH11333 | Soybean | cytosol | 39.34 | 61.38 |
| KRH50979 | Soybean | cytosol | 33.77 | 58.69 |
| GSMUA_Achr3P22880_001 | Banana | cytosol | 57.87 | 55.16 |
| Zm00001d007640_P001 | Maize | cytosol | 49.51 | 48.09 |
| TraesCS4D01G148000.1 | Wheat | cytosol | 49.18 | 48.0 |
| EES08900 | Sorghum | cytosol | 49.34 | 47.4 |
| TraesCS4A01G142500.3 | Wheat | plastid | 46.23 | 44.83 |
| Os11t0641200-01 | Rice | cytosol | 23.93 | 40.78 |
| Os10t0148800-01 | Rice | cytosol | 25.9 | 31.73 |
| AT5G23340.1 | Thale cress | cytosol | 19.02 | 28.64 |
| AT3G07550.2 | Thale cress | cytosol | 16.56 | 25.57 |
| AT3G58530.1 | Thale cress | cytosol | 14.26 | 24.65 |
| AT5G01720.1 | Thale cress | vacuole | 26.39 | 24.21 |
| AT5G25350.1 | Thale cress | cytosol | 24.26 | 23.76 |
| AT2G25490.1 | Thale cress | plastid | 24.26 | 23.57 |
| AT1G47056.1 | Thale cress | cytosol, plastid | 19.34 | 22.78 |
| AT5G27920.1 | Thale cress | cytosol, extracellular, peroxisome | 23.77 | 22.59 |
| AT1G21410.1 | Thale cress | cytosol | 12.62 | 21.39 |
| AT1G77000.1 | Thale cress | cytosol | 12.3 | 20.83 |
| AT5G67250.1 | Thale cress | cytosol | 17.87 | 20.68 |
| AT3G50080.1 | Thale cress | cytosol | 16.89 | 19.73 |
| AT4G07400.1 | Thale cress | nucleus | 17.54 | 19.31 |
Protein Annotations
| Gene3D:1.20.1280.50 | Gene3D:3.80.10.10 | MapMan:35.1 | EntrezGene:827219 | ProteinID:AEE83608.1 | EMBL:AF360328 |
| EMBL:AF361808 | ArrayExpress:AT4G15475 | EnsemblPlantsGene:AT4G15475 | RefSeq:AT4G15475 | TAIR:AT4G15475 | RefSeq:AT4G15475-TAIR-G |
| EnsemblPlants:AT4G15475.1 | TAIR:AT4G15475.1 | EMBL:AY056338 | EMBL:AY084229 | Unigene:At.26216 | ProteinID:CAB10325.1 |
| ProteinID:CAB78589.1 | InterPro:F-box-like_dom_sf | InterPro:F-box_dom | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR001611 | InterPro:IPR001810 | InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | InterPro:Leu-rich_rpt_Cys-con_subtyp |
| RefSeq:NP_567467.1 | PFAM:PF12937 | PFAM:PF13516 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 |
| PO:PO:0025281 | PANTHER:PTHR45517 | UniProt:Q9C5D2 | SMART:SM00256 | SMART:SM00367 | SUPFAM:SSF52047 |
| SUPFAM:SSF81383 | UniParc:UPI00000A03B9 | SEG:seg | : | : | : |
Description
FBL4F-box/LRR-repeat protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9C5D2]
Coordinates
chr4:+:8845812..8848869
Molecular Weight (calculated)
66426.3 Da
IEP (calculated)
8.490
GRAVY (calculated)
0.017
Length
610 amino acids
Sequence
(BLAST)
(BLAST)
001: MRGHDRINNC LPEELILEIF RRLESKPNRD ACSLVCKRWL SLERFSRTTL RIGASFSPDD FISLLSRRFL YITSIHVDER ISVSLPSLSP SPKRKRGRDS
101: SSPSSSKRKK LTDKTHSGAE NVESSSLTDT GLTALANGFP RIENLSLIWC PNVSSVGLCS LAQKCTSLKS LDLQGCYVGD QGLAAVGKFC KQLEELNLRF
201: CEGLTDVGVI DLVVGCSKSL KSIGVAASAK ITDLSLEAVG SHCKLLEVLY LDSEYIHDKG LIAVAQGCHR LKNLKLQCVS VTDVAFAAVG ELCTSLERLA
301: LYSFQHFTDK GMRAIGKGSK KLKDLTLSDC YFVSCKGLEA IAHGCKELER VEINGCHNIG TRGIEAIGKS CPRLKELALL YCQRIGNSAL QEIGKGCKSL
401: EILHLVDCSG IGDIAMCSIA KGCRNLKKLH IRRCYEIGNK GIISIGKHCK SLTELSLRFC DKVGNKALIA IGKGCSLQQL NVSGCNQISD AGITAIARGC
501: PQLTHLDISV LQNIGDMPLA ELGEGCPMLK DLVLSHCHHI TDNGLNHLVQ KCKLLETCHM VYCPGITSAG VATVVSSCPH IKKVLIEKWK VTERTTRRAG
601: SVISYLCMDL
101: SSPSSSKRKK LTDKTHSGAE NVESSSLTDT GLTALANGFP RIENLSLIWC PNVSSVGLCS LAQKCTSLKS LDLQGCYVGD QGLAAVGKFC KQLEELNLRF
201: CEGLTDVGVI DLVVGCSKSL KSIGVAASAK ITDLSLEAVG SHCKLLEVLY LDSEYIHDKG LIAVAQGCHR LKNLKLQCVS VTDVAFAAVG ELCTSLERLA
301: LYSFQHFTDK GMRAIGKGSK KLKDLTLSDC YFVSCKGLEA IAHGCKELER VEINGCHNIG TRGIEAIGKS CPRLKELALL YCQRIGNSAL QEIGKGCKSL
401: EILHLVDCSG IGDIAMCSIA KGCRNLKKLH IRRCYEIGNK GIISIGKHCK SLTELSLRFC DKVGNKALIA IGKGCSLQQL NVSGCNQISD AGITAIARGC
501: PQLTHLDISV LQNIGDMPLA ELGEGCPMLK DLVLSHCHHI TDNGLNHLVQ KCKLLETCHM VYCPGITSAG VATVVSSCPH IKKVLIEKWK VTERTTRRAG
601: SVISYLCMDL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.