CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d007640_P001	Maize	cytosol	88.5	89.49
TraesCS4D01G148000.1	Wheat	cytosol	73.07	74.24
Os11t0641200-01	Rice	cytosol	39.84	70.67
TraesCS4A01G142500.3	Wheat	plastid	68.66	69.32
GSMUA_Achr3P22880_001	Banana	cytosol	53.54	53.12
VIT_05s0020g02400.t01	Wine grape	cytosol	48.82	50.74
PGSC0003DMT400079115	Potato	cytosol	48.19	50.41
KRH02152	Soybean	cytosol	46.3	50.34
KRH20947	Soybean	cytosol, nucleus, peroxisome	47.24	49.42
Solyc06g054440.2.1	Tomato	mitochondrion	41.57	49.35
AT4G15475.1	Thale cress	cytosol	47.4	49.34
CDX90588	Canola	cytosol	48.35	48.81
CDY09760	Canola	cytosol	48.19	48.8
Bra012785.1-P	Field mustard	cytosol	48.19	48.73
KRH11333	Soybean	cytosol	27.87	45.27
KRH50979	Soybean	cytosol	23.62	42.73
EES04933	Sorghum	cytosol	15.12	27.51
KXG23663	Sorghum	cytosol	28.5	27.34
KXG29052	Sorghum	plastid	27.87	26.82
KXG22793	Sorghum	nucleus	28.98	26.44
EES07863	Sorghum	nucleus	28.19	25.9
EER90022	Sorghum	cytosol, plastid	24.57	24.92
KXG30697	Sorghum	cytosol	16.38	24.64
EES18256	Sorghum	cytosol, nucleus, plastid	13.7	23.58
EES06473	Sorghum	cytosol, peroxisome, plasma membrane	23.94	23.21
EES03986	Sorghum	cytosol	13.86	23.1
EES09509	Sorghum	cytosol	13.86	22.8
OQU89081	Sorghum	cytosol	17.8	21.52
KXG26667	Sorghum	plastid	15.43	20.94

Protein Annotations

Gene3D:1.20.1280.50	Gene3D:3.80.10.10	MapMan:35.1	EntrezGene:8079163	UniProt:C5Y703	EnsemblPlants:EES08900
ProteinID:EES08900	ProteinID:EES08900.1	InterPro:F-box-like_dom_sf	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_Cys-con_subtyp	PFAM:PF13516
PANTHER:PTHR45517	SMART:SM00367	EnsemblPlantsGene:SORBI_3005G198200	SUPFAM:SSF52047	SUPFAM:SSF81383	unigene:Sbi.6167
UniParc:UPI0001A865D7	RefSeq:XP_002449912.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr5:+:68367186..68372267

Molecular Weight (calculated)

68749.9 Da

IEP (calculated)

8.123

GRAVY (calculated)

0.124

Length

635 amino acids

Sequence
(BLAST)

001: MRGADLINAA LPDELLDDVI RRVGGAKRDL DACALVCRRW RRLERASRRS ARLAASGDRA DEVLRLVAER FTALAEVSVD ERLTASAGAA GASGSGPASR
101: SYHRSRMERG PYRAGMIRRR RRLPLASNLT LHISPFPLDQ PVGDQGSEHS CLTDVGLGHL ARGCTGLEKL SLVWCSAISS TGLVRIAEHC KKLTSLDLQA
201: CFIGDPGLTA IGVGCKLLRK LNLRFVEGTT DEGLIGLVKN CGQSLVSLAV ANCQWLTDAS LYAVGSHCPN LEILSVESDC VRSFGIISVA KGCRQLKTLK
301: LQCIGAGDDA LDAVGSFCPL LEILSLNNFE GFTDRSLTSI AKGCKNLTDL VLNECHLLTD RSLEFVARSC KKLARLKISG CQNMESVALE HIGRWCPGLL
401: ELSLIFCPRI QNSAFLEIGR GCSLLRTLFL VDCSRISDSA LSHIAQGCKN LTELSIRRGY EVGDRALLSI AENCKSLREL TLQFCERVSD AGLSAIAENC
501: PLQKLNLCGC HLITDSGLTA IARGCPDLVF LDISVLRIIS DIALAEIADG CPKLKEIALS HCPDVTNVGL DHLVRGCLQL ESCQMVYCRR ITSSGVATIV
601: SGCTRLKKLL VEEWKVSERT RRRAGPVLSF LCTGL

Best Arabidopsis Sequence Match ( AT4G15475.1 )
(BLAST)

001: MRGHDRINNC LPEELILEIF RRLESKPNRD ACSLVCKRWL SLERFSRTTL RIGASFSPDD FISLLSRRFL YITSIHVDER ISVSLPSLSP SPKRKRGRDS
101: SSPSSSKRKK LTDKTHSGAE NVESSSLTDT GLTALANGFP RIENLSLIWC PNVSSVGLCS LAQKCTSLKS LDLQGCYVGD QGLAAVGKFC KQLEELNLRF
201: CEGLTDVGVI DLVVGCSKSL KSIGVAASAK ITDLSLEAVG SHCKLLEVLY LDSEYIHDKG LIAVAQGCHR LKNLKLQCVS VTDVAFAAVG ELCTSLERLA
301: LYSFQHFTDK GMRAIGKGSK KLKDLTLSDC YFVSCKGLEA IAHGCKELER VEINGCHNIG TRGIEAIGKS CPRLKELALL YCQRIGNSAL QEIGKGCKSL
401: EILHLVDCSG IGDIAMCSIA KGCRNLKKLH IRRCYEIGNK GIISIGKHCK SLTELSLRFC DKVGNKALIA IGKGCSLQQL NVSGCNQISD AGITAIARGC
501: PQLTHLDISV LQNIGDMPLA ELGEGCPMLK DLVLSHCHHI TDNGLNHLVQ KCKLLETCHM VYCPGITSAG VATVVSSCPH IKKVLIEKWK VTERTTRRAG
601: SVISYLCMDL

Arabidopsis Description

FBL4F-box/LRR-repeat protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9C5D2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.