CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX90588	Canola	cytosol	97.61	97.3
AT4G15475.1	Thale cress	cytosol	80.86	83.11
PGSC0003DMT400079115	Potato	cytosol	65.23	67.38
KRH02152	Soybean	cytosol	61.72	66.27
Solyc06g054440.2.1	Tomato	mitochondrion	55.98	65.61
VIT_05s0020g02400.t01	Wine grape	cytosol	63.48	65.14
KRH20947	Soybean	cytosol, nucleus, peroxisome	62.84	64.91
KRH11333	Soybean	cytosol	37.8	60.61
KRH50979	Soybean	cytosol	31.9	56.98
GSMUA_Achr3P22880_001	Banana	cytosol	55.34	54.22
Zm00001d007640_P001	Maize	cytosol	48.96	48.89
EES08900	Sorghum	cytosol	48.8	48.19
TraesCS4D01G148000.1	Wheat	cytosol	47.53	47.68
TraesCS4A01G142500.3	Wheat	plastid	44.34	44.2
Os11t0641200-01	Rice	cytosol	23.45	41.06
Os10t0148800-01	Rice	cytosol	25.52	32.13
CDX88014	Canola	cytosol	19.14	29.63
CDY46953	Canola	cytosol	19.3	29.44
CDY40798	Canola	cytosol	18.82	28.71
CDY28039	Canola	cytosol	15.63	25.13
CDY19807	Canola	cytosol	24.24	24.68
CDY35942	Canola	cytosol	15.47	24.56
CDX87090	Canola	cytosol	24.08	24.51
CDX88173	Canola	cytosol	24.24	24.44
CDY35358	Canola	cytosol	24.08	24.24
CDX80608	Canola	cytosol	24.72	24.22
CDY06032	Canola	cytosol	13.56	24.08
CDX88253	Canola	cytosol	24.56	24.06
CDX80503	Canola	cytosol	23.76	23.99
CDY19741	Canola	cytosol	23.45	23.82
CDX71945	Canola	cytosol	13.4	23.8
CDX80753	Canola	endoplasmic reticulum	25.36	23.52
CDY53337	Canola	cytosol	23.92	23.47
CDX88336	Canola	cytosol	12.12	23.46
CDY11182	Canola	cytosol, endoplasmic reticulum, nucleus	25.2	23.37
CDX76980	Canola	cytosol	22.33	23.37
CDY67973	Canola	plasma membrane	13.08	22.65
CDY25663	Canola	plastid	18.5	22.57
CDX87549	Canola	cytosol	12.76	22.54
CDX96592	Canola	cytosol	12.92	22.38
CDY43846	Canola	plastid	18.34	22.37
CDX79184	Canola	cytosol	12.76	22.28
CDX68067	Canola	cytosol	12.76	22.28
CDX83114	Canola	cytosol	17.38	21.93
CDY18646	Canola	cytosol	17.86	21.37
CDX81326	Canola	cytosol	17.86	21.37
CDX68575	Canola	cytosol	17.07	20.94
CDY45764	Canola	cytosol, peroxisome, plastid	19.14	20.58
CDY58589	Canola	extracellular	4.15	19.85
CDY29091	Canola	plastid	5.42	19.65
CDY58588	Canola	extracellular	3.99	18.94
CDY01426	Canola	cytosol	18.66	10.8
CDY12824	Canola	nucleus	18.66	10.73

Protein Annotations

Gene3D:1.20.1280.50	Gene3D:3.80.10.10	MapMan:35.1	UniProt:A0A078F5N4	EnsemblPlants:CDY09760	ProteinID:CDY09760
ProteinID:CDY09760.1	InterPro:F-box-like_dom_sf	InterPro:F-box_dom	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
EnsemblPlantsGene:GSBRNA2T00031459001	InterPro:IPR001611	InterPro:IPR001810	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt
InterPro:Leu-rich_rpt_Cys-con_subtyp	PFAM:PF12937	PFAM:PF13516	PANTHER:PTHR45517	SMART:SM00256	SMART:SM00367
SUPFAM:SSF52047	SUPFAM:SSF81383	UniParc:UPI0004EE1F49	SEG:seg	:	:

Description

BnaC07g33010DBnaC07g33010D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F5N4]

Coordinates

chrLK031998:-:873661..876896

Molecular Weight (calculated)

67726.9 Da

IEP (calculated)

8.448

GRAVY (calculated)

0.109

Length

627 amino acids

Sequence
(BLAST)

001: MRGRDLINNG LPDELILEIF QRLDSKPTRD ACSLVCKRWL SLERFSRTTL RIGASFSPDT IATLLSRRFL HITSIHVDER LSLALPPPPP PLKRKRGSNK
101: SSSSSSSPSS SKRQKLSNKT RSGGAENAES CSLTDAGVIA LANGFPRIEN LSLIWCPNVS SFGLRSLAQI CTSLRSLDLQ GCFVGDQGLS AVGKFCKHLE
201: ELNLRFCEGL TDVGVIDLVL GCAKSLKSIG VAASAKVTDL SLEAVGSHCK LLEVLFLDSE CIHDKGVVAV VKGCRRLKSL KLQCVNVTDA AFSVVGDFCV
301: SLEMLALYSF QQFTDKGMKS IGKGCKNLKD LTLSDCYFVS CDGLEAIAHG CKELTRIEIN GCHNIGTRGL EAVGKSCPRL TELYLLYCQR IGNSALYQIG
401: KGCKSLETLH LVDCAGIGDT AMCSIAKGCR NLKKLHIRRC YEADNLHILF SMVGNKGVIA IGKNCKSLTE LSLRFCDKVG DAALVAVGKG CSFLQQLNVS
501: GCHLIGDVGI TAIAKGCPQL THLDISVLQK VGDASLSELG DGCPMLKDLV LSHCHYVTDN GLNHLVNKCK LLETSHMVYC PGITSAGVAT VVSSCSHIKK
601: VLIEKWKVSE RTIRRAGSIL SYLCMDL

Best Arabidopsis Sequence Match ( AT4G15475.1 )
(BLAST)

001: MRGHDRINNC LPEELILEIF RRLESKPNRD ACSLVCKRWL SLERFSRTTL RIGASFSPDD FISLLSRRFL YITSIHVDER ISVSLPSLSP SPKRKRGRDS
101: SSPSSSKRKK LTDKTHSGAE NVESSSLTDT GLTALANGFP RIENLSLIWC PNVSSVGLCS LAQKCTSLKS LDLQGCYVGD QGLAAVGKFC KQLEELNLRF
201: CEGLTDVGVI DLVVGCSKSL KSIGVAASAK ITDLSLEAVG SHCKLLEVLY LDSEYIHDKG LIAVAQGCHR LKNLKLQCVS VTDVAFAAVG ELCTSLERLA
301: LYSFQHFTDK GMRAIGKGSK KLKDLTLSDC YFVSCKGLEA IAHGCKELER VEINGCHNIG TRGIEAIGKS CPRLKELALL YCQRIGNSAL QEIGKGCKSL
401: EILHLVDCSG IGDIAMCSIA KGCRNLKKLH IRRCYEIGNK GIISIGKHCK SLTELSLRFC DKVGNKALIA IGKGCSLQQL NVSGCNQISD AGITAIARGC
501: PQLTHLDISV LQNIGDMPLA ELGEGCPMLK DLVLSHCHHI TDNGLNHLVQ KCKLLETCHM VYCPGITSAG VATVVSSCPH IKKVLIEKWK VTERTTRRAG
601: SVISYLCMDL

Arabidopsis Description

FBL4F-box/LRR-repeat protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9C5D2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.