Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX83114 | Canola | cytosol | 93.35 | 95.98 |
| AT3G50080.1 | Thale cress | cytosol | 77.89 | 76.25 |
| CDY18646 | Canola | cytosol | 71.23 | 69.47 |
| CDX81326 | Canola | cytosol | 71.04 | 69.27 |
| KRH28425 | Soybean | cytosol | 54.4 | 52.85 |
| KRH77049 | Soybean | cytosol | 53.82 | 52.68 |
| PGSC0003DMT400064250 | Potato | mitochondrion | 56.56 | 52.55 |
| Solyc02g092990.1.1 | Tomato | plastid | 56.16 | 52.18 |
| PGSC0003DMT400053918 | Potato | cytosol | 53.82 | 50.09 |
| VIT_07s0129g01110.t01 | Wine grape | plastid | 54.99 | 49.91 |
| Solyc03g044220.1.1 | Tomato | cytosol | 53.62 | 49.91 |
| KRH04530 | Soybean | cytosol | 52.25 | 49.54 |
| KRH57971 | Soybean | cytosol | 52.64 | 48.12 |
| CDY43846 | Canola | plastid | 48.34 | 48.05 |
| CDY25663 | Canola | plastid | 48.14 | 47.86 |
| GSMUA_Achr3P28280_001 | Banana | plastid | 45.6 | 47.26 |
| GSMUA_Achr9P11380_001 | Banana | cytosol | 41.29 | 47.1 |
| GSMUA_Achr8P15580_001 | Banana | cytosol | 36.99 | 46.32 |
| OQU89081 | Sorghum | cytosol | 45.99 | 44.76 |
| Zm00001d019677_P001 | Maize | cytosol | 45.21 | 44.0 |
| TraesCS5A01G161400.1 | Wheat | cytosol, plastid | 45.21 | 43.83 |
| GSMUA_Achr2P05250_001 | Banana | cytosol | 41.68 | 43.83 |
| TraesCS5B01G158800.1 | Wheat | plastid | 45.01 | 43.64 |
| TraesCS5D01G166300.1 | Wheat | cytosol, mitochondrion, peroxisome, plastid | 44.81 | 43.45 |
| GSMUA_Achr4P12920_001 | Banana | plastid | 43.25 | 43.25 |
| TraesCS2D01G358900.1 | Wheat | mitochondrion, plastid | 37.18 | 43.08 |
| GSMUA_Achr9P22570_001 | Banana | plastid | 36.99 | 42.95 |
| Os04t0505700-01 | Rice | cytosol, mitochondrion | 34.25 | 42.17 |
| Zm00001d003103_P001 | Maize | plastid | 42.27 | 41.54 |
| KXG26667 | Sorghum | plastid | 37.96 | 41.45 |
| HORVU5Hr1G050420.1 | Barley | plastid | 44.42 | 41.12 |
| TraesCS2A01G359900.1 | Wheat | cytosol | 42.47 | 40.11 |
| Zm00001d025808_P001 | Maize | plastid | 42.47 | 39.74 |
| Zm00001d025812_P001 | Maize | plastid | 42.47 | 39.74 |
| HORVU0Hr1G005070.1 | Barley | plastid | 41.88 | 38.35 |
| CDY01426 | Canola | cytosol | 71.62 | 33.8 |
| CDY12824 | Canola | nucleus | 71.62 | 33.58 |
| GSMUA_Achr9P18840_001 | Banana | plastid | 45.21 | 31.64 |
| CDX88014 | Canola | cytosol | 17.61 | 22.22 |
| CDY46953 | Canola | cytosol | 17.81 | 22.14 |
| CDY40798 | Canola | cytosol | 17.61 | 21.9 |
| CDX71945 | Canola | cytosol | 12.92 | 18.7 |
| CDY35942 | Canola | cytosol | 14.29 | 18.48 |
| CDY06032 | Canola | cytosol | 12.72 | 18.41 |
| CDX88173 | Canola | cytosol | 22.31 | 18.33 |
| CDY28039 | Canola | cytosol | 13.89 | 18.21 |
| CDX80503 | Canola | cytosol | 22.11 | 18.2 |
| CDY35358 | Canola | cytosol | 21.14 | 17.34 |
| CDY09760 | Canola | cytosol | 20.94 | 17.07 |
| CDX90588 | Canola | cytosol | 20.94 | 17.01 |
| CDY19741 | Canola | cytosol | 20.35 | 16.86 |
| CDY19807 | Canola | cytosol | 20.16 | 16.72 |
| CDX87090 | Canola | cytosol | 20.16 | 16.72 |
| CDX68067 | Canola | cytosol | 11.74 | 16.71 |
| CDX88336 | Canola | cytosol | 10.57 | 16.67 |
| CDX87549 | Canola | cytosol | 11.55 | 16.62 |
| CDX88253 | Canola | cytosol | 20.74 | 16.56 |
| CDX80608 | Canola | cytosol | 20.74 | 16.56 |
| CDX76980 | Canola | cytosol | 19.37 | 16.53 |
| CDX79184 | Canola | cytosol | 11.55 | 16.43 |
| CDY53337 | Canola | cytosol | 20.35 | 16.28 |
| CDY58589 | Canola | extracellular | 4.11 | 16.03 |
| CDY58588 | Canola | extracellular | 4.11 | 15.91 |
| CDY45764 | Canola | cytosol, peroxisome, plastid | 17.81 | 15.61 |
| CDY67973 | Canola | plasma membrane | 10.76 | 15.19 |
| CDX96592 | Canola | cytosol | 10.76 | 15.19 |
| CDY11182 | Canola | cytosol, endoplasmic reticulum, nucleus | 19.96 | 15.09 |
| CDX80753 | Canola | endoplasmic reticulum | 19.77 | 14.94 |
| Zm00001d037295_P001 | Maize | mitochondrion | 6.46 | 13.52 |
| CDY29091 | Canola | plastid | 4.5 | 13.29 |
| Zm00001d028552_P001 | Maize | cytosol, extracellular, mitochondrion, plastid | 5.68 | 13.06 |
| Zm00001d039723_P001 | Maize | cytosol, extracellular, plastid | 5.68 | 12.45 |
Protein Annotations
| Gene3D:1.20.1280.50 | MapMan:19.2.2.8.1.4.6 | Gene3D:3.80.10.10 | EnsemblPlants:CDX68575 | ProteinID:CDX68575 | ProteinID:CDX68575.1 |
| InterPro:F-box-like_dom_sf | InterPro:F-box_dom | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | EnsemblPlantsGene:GSBRNA2T00126159001 |
| InterPro:IPR001611 | InterPro:IPR001810 | InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | InterPro:Leu-rich_rpt_Cys-con_subtyp |
| PFAM:PF00646 | PFAM:PF13516 | PANTHER:PTHR44356 | PANTHER:PTHR44356:SF3 | SMART:SM00367 | SUPFAM:SSF52047 |
| SUPFAM:SSF81383 | UniParc:UPI0004EDDFC1 | SEG:seg | : | : | : |
Description
BnaC01g26530D
Coordinates
chrLK031788:+:4306600..4308346
Molecular Weight (calculated)
55874.4 Da
IEP (calculated)
8.628
GRAVY (calculated)
0.011
Length
511 amino acids
Sequence
(BLAST)
(BLAST)
001: MGQAPSSPAD STTRDTALWL WPPDFVDCDI TADLPDDCLA HIFQFLTAGD RKRCSLVSKR WLLVDGQNRH RLSLAAKAEI LPFLPSIFTR FDSVTKLALR
101: CDRNSFSLSD EAFAMVSTRC SNLTRVKLRG CREITDLGME SFARNCKSLK KLSCGSCDFG ARGLNAVLEH CKVLEELSVK RIRGIHETAE AVKLHSSSSL
201: RSICLKELVN GQVFESLVAS RTLKKLRIIR CLGNWDKVLQ VNGDGNSSLT EIHLERLQVS DFGLSAISKC RKLETLHIVK TPECSNSGLV CVVERCRLLR
301: KLHIDGWRTK RIGDEGLMAL SIHCLLLQEL VLIGVDATHT SLSPIASNCK KLERLALCGS GAIGDVEMAC IAEKCVALRK FCIKGCPITD VGIKALALGC
401: PNLVKLKVKK CIVVTGDVRE WLRERRRTLV VSMDGDETKG PVMVSEHGGR GLETVVEEVL TPVADGGGDA ELAGGGGGGR LAMLKTKLLA SKNFVAFTLR
501: RWLQSEATGS T
101: CDRNSFSLSD EAFAMVSTRC SNLTRVKLRG CREITDLGME SFARNCKSLK KLSCGSCDFG ARGLNAVLEH CKVLEELSVK RIRGIHETAE AVKLHSSSSL
201: RSICLKELVN GQVFESLVAS RTLKKLRIIR CLGNWDKVLQ VNGDGNSSLT EIHLERLQVS DFGLSAISKC RKLETLHIVK TPECSNSGLV CVVERCRLLR
301: KLHIDGWRTK RIGDEGLMAL SIHCLLLQEL VLIGVDATHT SLSPIASNCK KLERLALCGS GAIGDVEMAC IAEKCVALRK FCIKGCPITD VGIKALALGC
401: PNLVKLKVKK CIVVTGDVRE WLRERRRTLV VSMDGDETKG PVMVSEHGGR GLETVVEEVL TPVADGGGDA ELAGGGGGGR LAMLKTKLLA SKNFVAFTLR
501: RWLQSEATGS T
001: MGQAPSSPAE PNVRDTSLCL WSPEFLDCES IGFEDGDYDF TANLPDDCLA HIFQFLSAGD RKRCSLVSKR WLLVDGQNRH RLSLDAKSEI LPFLPCIFNR
101: FDSVTKLALR CDRRSFSLSD EALFIVSIRC SNLIRVKLRG CREITDLGME SFARNCKSLR KLSCGSCTFG AKGINAMLEH CKVLEELSLK RIRGLHELAE
201: PIKLSLSASL RSVFLKELVN GQVFGSLVAT RTLKKVKIIR CLGNWDRVFE MNGNGNSSLT EIRLERLQVT DIGLFGISKC SNLETLHIVK TPDCSNLGLA
301: SVVERCKLLR KLHIDGWRVK RIGDQGLMSV AKHCLNLQEL VLIGVDATYM SLSAIASNCK KLERLALCGS GTIGDAEIGC IAEKCVTLRK FCIKGCLISD
401: VGVQALALGC PKLVKLKVKK CSLVTGEVRE WLRERRMTLV VSMDDDETNG VGLVDGGDQR VLETVVEEEA PPVIDGDGGL GVAGGGRLGL AILKTKLGLL
501: AGRNLVACTL RRWSQSEATS SI
101: FDSVTKLALR CDRRSFSLSD EALFIVSIRC SNLIRVKLRG CREITDLGME SFARNCKSLR KLSCGSCTFG AKGINAMLEH CKVLEELSLK RIRGLHELAE
201: PIKLSLSASL RSVFLKELVN GQVFGSLVAT RTLKKVKIIR CLGNWDRVFE MNGNGNSSLT EIRLERLQVT DIGLFGISKC SNLETLHIVK TPDCSNLGLA
301: SVVERCKLLR KLHIDGWRVK RIGDQGLMSV AKHCLNLQEL VLIGVDATYM SLSAIASNCK KLERLALCGS GTIGDAEIGC IAEKCVTLRK FCIKGCLISD
401: VGVQALALGC PKLVKLKVKK CSLVTGEVRE WLRERRMTLV VSMDDDETNG VGLVDGGDQR VLETVVEEEA PPVIDGDGGL GVAGGGRLGL AILKTKLGLL
501: AGRNLVACTL RRWSQSEATS SI
Arabidopsis Description
FBL16F-box/LRR-repeat protein 16 [Source:UniProtKB/Swiss-Prot;Acc:Q9SN10]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.