Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH04530 | Soybean | cytosol | 87.48 | 90.72 |
| KRH28425 | Soybean | cytosol | 61.0 | 64.83 |
| KRH77049 | Soybean | cytosol | 60.47 | 64.75 |
| CDX81326 | Canola | cytosol | 54.02 | 57.63 |
| AT5G67250.1 | Thale cress | cytosol | 53.67 | 56.93 |
| CDY18646 | Canola | cytosol | 53.13 | 56.68 |
| Bra037120.1-P | Field mustard | cytosol | 53.13 | 56.46 |
| CDX83114 | Canola | cytosol | 48.3 | 54.33 |
| Bra029994.1-P | Field mustard | cytosol | 49.02 | 53.62 |
| CDX68575 | Canola | cytosol | 48.12 | 52.64 |
| AT3G50080.1 | Thale cress | cytosol | 48.84 | 52.3 |
| PGSC0003DMT400053918 | Potato | cytosol | 51.16 | 52.09 |
| Solyc03g044220.1.1 | Tomato | cytosol | 50.8 | 51.73 |
| VIT_07s0129g01110.t01 | Wine grape | plastid | 52.06 | 51.69 |
| Solyc02g092990.1.1 | Tomato | plastid | 50.45 | 51.27 |
| PGSC0003DMT400064250 | Potato | mitochondrion | 50.45 | 51.27 |
| GSMUA_Achr3P28280_001 | Banana | plastid | 44.36 | 50.3 |
| KRH15408 | Soybean | plastid | 49.2 | 50.09 |
| KRH05631 | Soybean | plastid | 48.84 | 48.49 |
| GSMUA_Achr9P11380_001 | Banana | cytosol | 38.64 | 48.21 |
| GSMUA_Achr8P15580_001 | Banana | cytosol | 35.06 | 48.04 |
| GSMUA_Achr4P12920_001 | Banana | plastid | 42.93 | 46.97 |
| OQU89081 | Sorghum | cytosol | 43.65 | 46.48 |
| GSMUA_Achr9P22570_001 | Banana | plastid | 36.31 | 46.14 |
| Zm00001d019677_P001 | Maize | cytosol | 42.93 | 45.71 |
| TraesCS2D01G358900.1 | Wheat | mitochondrion, plastid | 35.6 | 45.12 |
| KXG26667 | Sorghum | plastid | 37.39 | 44.66 |
| TraesCS5A01G161400.1 | Wheat | cytosol, plastid | 42.04 | 44.59 |
| TraesCS5D01G166300.1 | Wheat | cytosol, mitochondrion, peroxisome, plastid | 42.04 | 44.59 |
| TraesCS5B01G158800.1 | Wheat | plastid | 41.86 | 44.4 |
| Os04t0505700-01 | Rice | cytosol, mitochondrion | 32.92 | 44.34 |
| Zm00001d003103_P001 | Maize | plastid | 40.79 | 43.85 |
| GSMUA_Achr2P05250_001 | Banana | cytosol | 37.57 | 43.21 |
| HORVU5Hr1G050420.1 | Barley | plastid | 42.22 | 42.75 |
| Zm00001d025808_P001 | Maize | plastid | 41.32 | 42.31 |
| Zm00001d025812_P001 | Maize | plastid | 41.14 | 42.12 |
| KRH52037 | Soybean | cytosol | 30.23 | 41.83 |
| TraesCS2A01G359900.1 | Wheat | cytosol | 40.07 | 41.4 |
| HORVU0Hr1G005070.1 | Barley | plastid | 39.53 | 39.61 |
| GSMUA_Achr9P18840_001 | Banana | plastid | 40.97 | 31.37 |
| CDY01426 | Canola | cytosol | 53.31 | 27.52 |
| CDY12824 | Canola | nucleus | 53.13 | 27.25 |
| KRH61346 | Soybean | cytosol | 27.73 | 22.21 |
| KRG90608 | Soybean | cytosol | 16.28 | 21.77 |
| KRH02152 | Soybean | cytosol | 22.54 | 21.58 |
| KRH36149 | Soybean | cytosol | 16.1 | 21.48 |
| KRH47976 | Soybean | cytosol | 13.95 | 20.1 |
| KRH15886 | Soybean | cytosol | 23.08 | 20.03 |
| KRH05167 | Soybean | cytosol | 21.82 | 20.0 |
| KRH11333 | Soybean | cytosol | 13.95 | 19.95 |
| KRH20255 | Soybean | cytosol | 22.18 | 19.41 |
| KRH20947 | Soybean | cytosol, nucleus, peroxisome | 20.93 | 19.28 |
| KRH03688 | Soybean | cytosol | 22.0 | 19.25 |
| KRH50979 | Soybean | cytosol | 11.81 | 18.8 |
| KRH62989 | Soybean | cytosol | 21.82 | 18.77 |
| KRH52439 | Soybean | cytosol, nucleus, peroxisome | 21.29 | 18.65 |
| KRH61771 | Soybean | cytosol | 21.11 | 18.55 |
| KRH16153 | Soybean | cytosol | 8.23 | 18.55 |
| KRH64574 | Soybean | cytosol | 10.2 | 17.76 |
| KRH76059 | Soybean | cytosol, nucleus, peroxisome | 21.29 | 17.73 |
| KRH38032 | Soybean | cytosol | 11.99 | 17.72 |
| KRH18090 | Soybean | cytosol | 11.63 | 17.33 |
| KRH15905 | Soybean | cytosol | 11.45 | 17.25 |
| KRH53355 | Soybean | cytosol | 11.45 | 17.2 |
| KRH65525 | Soybean | cytosol, peroxisome, plastid | 21.65 | 17.09 |
| KRH68483 | Soybean | cytosol | 19.14 | 16.69 |
| KRH17127 | Soybean | cytosol | 19.32 | 16.56 |
| KRG96764 | Soybean | cytosol | 18.96 | 16.54 |
| KRH04870 | Soybean | cytosol | 7.87 | 16.18 |
| Zm00001d037295_P001 | Maize | mitochondrion | 6.98 | 15.98 |
| KRH72766 | Soybean | cytosol | 15.21 | 15.8 |
| Zm00001d028552_P001 | Maize | cytosol, extracellular, mitochondrion, plastid | 6.26 | 15.77 |
| Zm00001d039723_P001 | Maize | cytosol, extracellular, plastid | 6.26 | 15.02 |
Protein Annotations
| Gene3D:1.20.1280.50 | EntrezGene:100817022 | MapMan:19.2.2.8.1.4.6 | Gene3D:3.80.10.10 | EMBL:ACUP02003181 | InterPro:F-box-like_dom_sf |
| InterPro:F-box_dom | EnsemblPlantsGene:GLYMA_05G097100 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR001810 |
| InterPro:IPR032675 | UniProt:K7KP92 | EnsemblPlants:KRH57971 | ProteinID:KRH57971 | ProteinID:KRH57971.1 | InterPro:LRR_dom_sf |
| InterPro:Leu-rich_rpt_Cys-con_subtyp | PFAM:PF12937 | PANTHER:PTHR44356 | PANTHER:PTHR44356:SF2 | SMART:SM00367 | SUPFAM:SSF52047 |
| SUPFAM:SSF81383 | UniParc:UPI0002954C93 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr5:-:25575679..25584622
Molecular Weight (calculated)
61041.7 Da
IEP (calculated)
8.117
GRAVY (calculated)
-0.028
Length
559 amino acids
Sequence
(BLAST)
(BLAST)
001: MRDKHVLVHS IPHQNPAFHI IFFFISPMGQ APSTPVSSTD LSHRDIFTTD ESIGRDYTAD IPDECLAGIF QFLSSVDRKT CSAVCRRWLR VDGENRQRLS
101: LNAKASLVDF VPSLFSRFDS VTKLALRCDR KSTSVNDDAL VLISLRCRNL VRLKLRGCRE VTEHGMADVA KNCTNLKKLS CGSCAFGAKG VYAFVNNSIV
201: LEEVSIKRLR GVEKDNNDGV DGAESLPLSV TSSSLRSICL KELVNGHCFA PLIVNSKKLE TLKLIRCLGD WDVTLESVGK LNSGLVEIHL EKVQVSDVGL
301: LGVSKCLKLE SLHLVKTPEC SDVGLCEVAE RCKMLKKLHI DGWRTNRIGD CGLMSVAKHC PNLQELVLIA MYPTSLSLAA IVSGCQGLER FALCGICTVG
401: DAEIESIVAK CGALRKLCIK GCPVSNAGIA ALASGCPNLV KLKVRKCRRV NGEVVEWLRE RRSSLVFSID YSTEVEALDG SGSDVGAQES SMASPPIDTT
501: QVSMVDDPPS SSNNSSSNNN NNRLSMFRNK FGFLAGRNLV PCAFRKWANI DDISSTSFQ
101: LNAKASLVDF VPSLFSRFDS VTKLALRCDR KSTSVNDDAL VLISLRCRNL VRLKLRGCRE VTEHGMADVA KNCTNLKKLS CGSCAFGAKG VYAFVNNSIV
201: LEEVSIKRLR GVEKDNNDGV DGAESLPLSV TSSSLRSICL KELVNGHCFA PLIVNSKKLE TLKLIRCLGD WDVTLESVGK LNSGLVEIHL EKVQVSDVGL
301: LGVSKCLKLE SLHLVKTPEC SDVGLCEVAE RCKMLKKLHI DGWRTNRIGD CGLMSVAKHC PNLQELVLIA MYPTSLSLAA IVSGCQGLER FALCGICTVG
401: DAEIESIVAK CGALRKLCIK GCPVSNAGIA ALASGCPNLV KLKVRKCRRV NGEVVEWLRE RRSSLVFSID YSTEVEALDG SGSDVGAQES SMASPPIDTT
501: QVSMVDDPPS SSNNSSSNNN NNRLSMFRNK FGFLAGRNLV PCAFRKWANI DDISSTSFQ
001: MGQAPSSTAE SNGRELDLRL WSPVIVAGGE SMAVGNVVDR DFTGDLPDEC LAHVFQFLGA GDRKRCSLVC KRWLLVDGQS RHRLSLDAKD EISSFLTSMF
101: NRFDSVTKLA LRCDRKSVSL SDEALAMISV RCLNLTRVKL RGCREITDLG MEDFAKNCKN LKKLSVGSCN FGAKGVNAML EHCKLLEELS VKRLRGIHEA
201: AELIHLPDDA SSSSLRSICL KELVNGQVFE PLLATTRTLK TLKIIRCLGD WDKVLQMIAN GKSSLSEIHL ERLQVSDIGL SAISKCSNVE TLHIVKTPEC
301: SNFGLIYVAE RCKLLRKLHI DGWRTNRIGD EGLLSVAKHC LNLQELVLIG VNATHMSLAA IASNCEKLER LALCGSGTIG DTEIACIARK CGALRKFCIK
401: GCPVSDRGIE ALAVGCPNLV KLKVKKCKVV TGEIGDWLRE QRRTLVVSMD GDETEAVVVV DGEVETVVEE PRVAQAGGIV AEIGSSNGGG GSRLAMIRSK
501: LGFLAGRNLV TCTFRRWSHN DNASSST
101: NRFDSVTKLA LRCDRKSVSL SDEALAMISV RCLNLTRVKL RGCREITDLG MEDFAKNCKN LKKLSVGSCN FGAKGVNAML EHCKLLEELS VKRLRGIHEA
201: AELIHLPDDA SSSSLRSICL KELVNGQVFE PLLATTRTLK TLKIIRCLGD WDKVLQMIAN GKSSLSEIHL ERLQVSDIGL SAISKCSNVE TLHIVKTPEC
301: SNFGLIYVAE RCKLLRKLHI DGWRTNRIGD EGLLSVAKHC LNLQELVLIG VNATHMSLAA IASNCEKLER LALCGSGTIG DTEIACIARK CGALRKFCIK
401: GCPVSDRGIE ALAVGCPNLV KLKVKKCKVV TGEIGDWLRE QRRTLVVSMD GDETEAVVVV DGEVETVVEE PRVAQAGGIV AEIGSSNGGG GSRLAMIRSK
501: LGFLAGRNLV TCTFRRWSHN DNASSST
Arabidopsis Description
SKIP2F-box protein SKIP2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FE83]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.