Factsheet for Zm00001d039723_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid, extracellular, cytosol

Predictor Summary:

mitochondrion 2
cytosol 1
plastid 1
extracellular 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular, plastid
Any Predictor:	cytosol, extracellular, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d028552_P001	Maize	cytosol, extracellular, mitochondrion, plastid	88.41	92.79
Zm00001d037295_P001	Maize	mitochondrion	83.69	79.92
Zm00001d036880_P003	Maize	cytosol	62.23	19.7
Zm00001d000408_P001	Maize	cytosol	60.94	19.11
Zm00001d015778_P001	Maize	cytosol	48.5	17.57
Zm00001d053642_P001	Maize	cytosol	48.07	17.2
PGSC0003DMT400008648	Potato	cytosol	7.3	10.18
Zm00001d015974_P002	Maize	cytosol	15.02	9.78
Zm00001d051219_P001	Maize	cytosol	15.45	8.63
GSMUA_Achr8P15580_001	Banana	cytosol	13.73	7.84
GSMUA_Achr9P11380_001	Banana	cytosol	14.59	7.59
Zm00001d007640_P001	Maize	cytosol	17.6	6.53
KRH04530	Soybean	cytosol	15.02	6.49
KRH52037	Soybean	cytosol	11.16	6.44
KRH57971	Soybean	cytosol	15.02	6.26
Zm00001d044622_P002	Maize	mitochondrion	18.88	6.25
Zm00001d023825_P001	Maize	cytosol	17.6	6.21
Zm00001d041635_P002	Maize	cytosol	17.6	6.18
PGSC0003DMT400064250	Potato	mitochondrion	14.59	6.18
AT1G47056.1	Thale cress	cytosol, plastid	13.73	6.18
Zm00001d048695_P001	Maize	cytosol	17.17	6.17
Zm00001d003103_P001	Maize	plastid	13.73	6.15
Zm00001d025812_P001	Maize	plastid	14.16	6.04
Zm00001d025808_P001	Maize	plastid	14.16	6.04
Zm00001d038224_P004	Maize	cytosol	9.44	5.98
CDY43846	Canola	plastid	12.88	5.84
Bra032213.1-P	Field mustard	plastid	12.88	5.84
CDY25663	Canola	plastid	12.88	5.84
Solyc02g092990.1.1	Tomato	plastid	13.73	5.82
Solyc04g078490.1.1	Tomato	cytosol	13.3	5.81
Zm00001d019677_P001	Maize	cytosol	12.88	5.71
CDX68575	Canola	cytosol	12.45	5.68
Zm00001d005072_P003	Maize	mitochondrion	17.6	5.66
CDX83114	Canola	cytosol	12.02	5.63
AT3G50080.1	Thale cress	cytosol	12.45	5.56
VIT_18s0001g09940.t01	Wine grape	plastid	12.88	5.55
Bra029994.1-P	Field mustard	cytosol	12.02	5.48
PGSC0003DMT400053918	Potato	cytosol	12.88	5.46
KRH15408	Soybean	plastid	12.88	5.46
Solyc03g044220.1.1	Tomato	cytosol	12.88	5.46
KRH05631	Soybean	plastid	12.88	5.33
CDX81326	Canola	cytosol	11.59	5.15
CDY18646	Canola	cytosol	11.59	5.15
Bra037120.1-P	Field mustard	cytosol	11.59	5.13
AT5G67250.1	Thale cress	cytosol	11.59	5.12
KRH77049	Soybean	cytosol	11.16	4.98
KRH28425	Soybean	cytosol	11.16	4.94
AT4G07400.1	Thale cress	nucleus	11.16	4.69
PGSC0003DMT400091765	Potato	cytosol	13.73	4.53
VIT_07s0129g01110.t01	Wine grape	plastid	10.73	4.44
Zm00001d000224_P001	Maize	cytosol	8.15	4.39
Zm00001d007294_P001	Maize	cytosol	7.3	4.19
KRH61346	Soybean	cytosol	11.16	3.72
CDY01426	Canola	cytosol	13.3	2.86
CDY12824	Canola	nucleus	12.88	2.75

Protein Annotations

EnsemblPlants:Zm00001d039723_P001	EnsemblPlants:Zm00001d039723_T001	EnsemblPlantsGene:Zm00001d039723	Gene3D:3.80.10.10	InterPro:IPR032675	InterPro:LRR_dom_sf
InterPro:Leu-rich_rpt_Cys-con_subtyp	PANTHER:PTHR44327	PANTHER:PTHR44327:SF3	ProteinID:ONM29814.1	SEG:seg	SMART:SM00367
SUPFAM:SSF52047	UniParc:UPI0008445565	UniProt:A0A1D6MKS5	MapMan:35.1	:	:

Description

EIN3-binding F-box protein 1

Coordinates

chr3:-:12989962..12990863

Molecular Weight (calculated)

24640.7 Da

IEP (calculated)

8.296

GRAVY (calculated)

0.247

Length

233 amino acids

Sequence
(BLAST)

001: MRFQGLNVTN YASLVMMGDY GKSIKDLALA RIPTVSLESL QIEECSKVTL TGIIAFFLNC SPKFKSLSLS KCIEIKDICS ASAQLPVCKS LRSLAIKDCS
101: GFTDTSLPMV GMFCPQLENI NLSGLSAITD NGFLPLMKSS DSGLVDIDLN SCENLTVTNA AVSALVKAHD ASLATSVSRD AARSLMQACS PSVRAAASSS
201: SSAFRTAWSV TTTSRSWKRR SSSGCVSSCC VAV

Best Arabidopsis Sequence Match ( AT2G25490.1 )
(BLAST)

001: MSQIFSFAGE NDFYRRGAIY PNPKDASLLL SLGSFADVYF PPSKRSRVVA PTIFSAFEKK PVSIDVLPDE CLFEIFRRLS GPQERSACAF VSKQWLTLVS
101: SIRQKEIDVP SKITEDGDDC EGCLSRSLDG KKATDVRLAA IAVGTAGRGG LGKLSIRGSN SAKVSDLGLR SIGRSCPSLG SLSLWNVSTI TDNGLLEIAE
201: GCAQLEKLEL NRCSTITDKG LVAIAKSCPN LTELTLEACS RIGDEGLLAI ARSCSKLKSV SIKNCPLVRD QGIASLLSNT TCSLAKLKLQ MLNVTDVSLA
301: VVGHYGLSIT DLVLAGLSHV SEKGFWVMGN GVGLQKLNSL TITACQGVTD MGLESVGKGC PNMKKAIISK SPLLSDNGLV SFAKASLSLE SLQLEECHRV
401: TQFGFFGSLL NCGEKLKAFS LVNCLSIRDL TTGLPASSHC SALRSLSIRN CPGFGDANLA AIGKLCPQLE DIDLCGLKGI TESGFLHLIQ SSLVKINFSG
501: CSNLTDRVIS AITARNGWTL EVLNIDGCSN ITDASLVSIA ANCQILSDLD ISKCAISDSG IQALASSDKL KLQILSVAGC SMVTDKSLPA IVGLGSTLLG
601: LNLQQCRSIS NSTVDFLVER LYKCDILS

Arabidopsis Description

EBF1EIN3-binding F-box protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SKK0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.