Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plastid 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER90022 | Sorghum | cytosol, plastid | 79.35 | 93.29 |
| Zm00001d000408_P001 | Maize | cytosol | 85.73 | 84.93 |
| HORVU7Hr1G090240.1 | Barley | cytosol | 57.88 | 79.04 |
| TraesCS7B01G278800.1 | Wheat | cytosol | 64.95 | 73.88 |
| TraesCS7D01G373800.1 | Wheat | cytosol | 64.95 | 73.43 |
| TraesCS7A01G377500.1 | Wheat | cytosol | 64.54 | 73.19 |
| Os06t0605900-01 | Rice | cytosol | 62.09 | 72.89 |
| HORVU1Hr1G089690.1 | Barley | cytosol, extracellular, mitochondrion | 25.54 | 70.68 |
| Zm00001d015778_P001 | Maize | cytosol | 58.7 | 67.19 |
| Zm00001d028552_P001 | Maize | cytosol, extracellular, mitochondrion, plastid | 20.24 | 67.12 |
| Zm00001d037295_P001 | Maize | mitochondrion | 22.01 | 66.39 |
| Zm00001d053642_P001 | Maize | cytosol | 58.56 | 66.21 |
| HORVU5Hr1G029670.1 | Barley | mitochondrion | 44.02 | 63.16 |
| Zm00001d039723_P001 | Maize | cytosol, extracellular, plastid | 19.7 | 62.23 |
| HORVU5Hr1G000950.4 | Barley | plastid | 35.73 | 58.84 |
| GSMUA_Achr6P05220_001 | Banana | cytosol | 44.29 | 49.85 |
| GSMUA_Achr4P30680_001 | Banana | cytosol | 43.07 | 48.62 |
| GSMUA_Achr10P... | Banana | extracellular, plasma membrane, plastid | 43.61 | 48.05 |
| GSMUA_Achr9P28510_001 | Banana | cytosol, nucleus, peroxisome | 42.26 | 47.55 |
| GSMUA_Achr2P15920_001 | Banana | cytosol, peroxisome, plastid | 42.8 | 47.16 |
| PGSC0003DMT400007545 | Potato | cytosol | 40.62 | 46.94 |
| KRH20255 | Soybean | cytosol | 40.62 | 46.79 |
| Solyc12g009560.1.1 | Tomato | cytosol | 40.49 | 46.78 |
| KRH03688 | Soybean | cytosol | 40.35 | 46.48 |
| PGSC0003DMT400079445 | Potato | cytosol, nucleus, peroxisome | 40.35 | 46.26 |
| Bra036542.1-P | Field mustard | cytosol | 38.45 | 45.94 |
| VIT_11s0016g05410.t01 | Wine grape | cytosol | 41.17 | 45.7 |
| Solyc07g008250.2.1 | Tomato | cytosol, nucleus, peroxisome | 39.67 | 45.55 |
| KRH15886 | Soybean | cytosol | 39.67 | 45.34 |
| KRH62989 | Soybean | cytosol | 39.81 | 45.08 |
| CDX87090 | Canola | cytosol | 37.64 | 44.97 |
| KRH04870 | Soybean | cytosol | 16.58 | 44.85 |
| VIT_04s0008g05470.t01 | Wine grape | cytosol | 40.62 | 44.83 |
| Solyc08g060810.2.1 | Tomato | plastid | 40.35 | 44.66 |
| CDY19807 | Canola | cytosol | 37.36 | 44.64 |
| CDX80503 | Canola | cytosol | 37.64 | 44.61 |
| PGSC0003DMT400040977 | Potato | nucleus | 40.49 | 44.54 |
| CDX88173 | Canola | cytosol | 37.64 | 44.53 |
| AT5G25350.1 | Thale cress | cytosol | 37.64 | 44.46 |
| Bra009835.1-P | Field mustard | cytosol | 37.5 | 44.37 |
| CDY35358 | Canola | cytosol | 37.09 | 43.82 |
| KRH05167 | Soybean | cytosol | 36.28 | 43.77 |
| Bra034254.1-P | Field mustard | cytosol | 36.96 | 43.73 |
| KRH52439 | Soybean | cytosol, nucleus, peroxisome | 37.77 | 43.57 |
| KRH61771 | Soybean | cytosol | 37.64 | 43.55 |
| AT2G25490.1 | Thale cress | plastid | 37.09 | 43.47 |
| PGSC0003DMT400094835 | Potato | cytosol | 14.4 | 43.27 |
| CDX76980 | Canola | cytosol | 35.05 | 43.07 |
| PGSC0003DMT400089433 | Potato | mitochondrion | 25.68 | 41.18 |
| PGSC0003DMT400042949 | Potato | cytosol | 29.89 | 39.86 |
| Solyc06g049010.1.1 | Tomato | plastid | 31.66 | 37.58 |
| Solyc06g030620.1.1 | Tomato | cytosol | 9.78 | 35.82 |
| Solyc06g030610.1.1 | Tomato | cytosol | 13.32 | 35.77 |
| Zm00001d015974_P002 | Maize | cytosol | 12.09 | 24.86 |
| Zm00001d051219_P001 | Maize | cytosol | 13.72 | 24.22 |
| Zm00001d007640_P001 | Maize | cytosol | 20.52 | 24.04 |
| Zm00001d038224_P004 | Maize | cytosol | 11.68 | 23.37 |
| Zm00001d041635_P002 | Maize | cytosol | 19.7 | 21.87 |
| Zm00001d023825_P001 | Maize | cytosol | 19.43 | 21.67 |
| Zm00001d048695_P001 | Maize | cytosol | 18.89 | 21.45 |
| Zm00001d044622_P002 | Maize | mitochondrion | 20.24 | 21.16 |
| Zm00001d005072_P003 | Maize | mitochondrion | 19.57 | 19.86 |
| Zm00001d003103_P001 | Maize | plastid | 13.99 | 19.81 |
| Zm00001d007294_P001 | Maize | cytosol | 10.87 | 19.7 |
| Zm00001d025808_P001 | Maize | plastid | 14.54 | 19.6 |
| Zm00001d025812_P001 | Maize | plastid | 14.54 | 19.6 |
| Zm00001d019677_P001 | Maize | cytosol | 13.86 | 19.43 |
| Zm00001d000224_P001 | Maize | cytosol | 11.41 | 19.4 |
Protein Annotations
| MapMan:11.5.2.6 | MapMan:19.2.2.8.1.4.2 | Gene3D:3.80.10.10 | UniProt:A0A1D6LS92 | ProteinID:AQK82319.1 | InterPro:F-box-like_dom_sf |
| InterPro:F-box_dom | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR001611 | InterPro:IPR001810 |
| InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | InterPro:Leu-rich_rpt_Cys-con_subtyp | PFAM:PF00646 | PFAM:PF13516 |
| PANTHER:PTHR44327 | PANTHER:PTHR44327:SF3 | SMART:SM00367 | SUPFAM:SSF52047 | SUPFAM:SSF81383 | UniParc:UPI0008431886 |
| EnsemblPlantsGene:Zm00001d036880 | EnsemblPlants:Zm00001d036880_P003 | EnsemblPlants:Zm00001d036880_T003 | SEG:seg | : | : |
Description
EIN3-binding F-box protein1EIN3-binding F-box protein 1
Coordinates
chr6:-:105523648..105526361
Molecular Weight (calculated)
78311.2 Da
IEP (calculated)
8.347
GRAVY (calculated)
0.166
Length
736 amino acids
Sequence
(BLAST)
(BLAST)
001: MNPADPEGKG YELRQLGQLA SRVRHHIKRR RHRALLPHPT TTSSPLPLTR PFRLIRHFFP VAVSDRVRRP SSKSALLRFD FSGVLGASFG FIDGVLGLLR
101: LDMSPFLFVC SYPSFLRLGD AVLSGVRSRK RVFATAAAEP VTAAPKRQKR GDEMPLDALP DECLFEVLRR VQGTRARCAS ACVSRRWLAL LAGIRASEAV
201: LAPAAPAVPD LNQEYLSEDD EADLMDLDGD ARERTLEGME ATDARLTAAA VAGRLAAVSV RGSHPARGVT DAGISALARG CPELRSLTLW DVPQVTDAGL
301: AEVAAECHSL ERLDISGCPM ITDKGLAAVA QGCPELKSLT IEGCSGVANE GLKAVGRFCA KLQAVSIKNC ALVDDQGVSG LVCSATASSL TKVRLQGLNI
401: TDASLAVIGY YGKSIKDLTL SRLPAVGERG FWVMANALGL QKLRRMTVVS CPGLTDLALA SVAKFSPSLR LVNLKRCSKV SDGCLKEFAE SSKVLENLQI
501: EECSRVTLTG ILAFLLNCSP KFKSLSLSKC VGIKDICSAP AQLPVCKSLR SLAIKDCPGF TDASLAVVGM ICPQLENVNL SGLSAVTDSG FLPLIKSSNS
601: GLVNVDLNGC ENLTDAAVSA LVKAHGASLA HLSLEGCSKI TDASLFAISE SCSQLAELDL SNCMVSDYGV AVLAAAKQLR LRVLSLSGCM KVTQKSVPFL
701: GSMSSSLEGL NLQFNFIGNH NIASLEKQLW RCDILA
101: LDMSPFLFVC SYPSFLRLGD AVLSGVRSRK RVFATAAAEP VTAAPKRQKR GDEMPLDALP DECLFEVLRR VQGTRARCAS ACVSRRWLAL LAGIRASEAV
201: LAPAAPAVPD LNQEYLSEDD EADLMDLDGD ARERTLEGME ATDARLTAAA VAGRLAAVSV RGSHPARGVT DAGISALARG CPELRSLTLW DVPQVTDAGL
301: AEVAAECHSL ERLDISGCPM ITDKGLAAVA QGCPELKSLT IEGCSGVANE GLKAVGRFCA KLQAVSIKNC ALVDDQGVSG LVCSATASSL TKVRLQGLNI
401: TDASLAVIGY YGKSIKDLTL SRLPAVGERG FWVMANALGL QKLRRMTVVS CPGLTDLALA SVAKFSPSLR LVNLKRCSKV SDGCLKEFAE SSKVLENLQI
501: EECSRVTLTG ILAFLLNCSP KFKSLSLSKC VGIKDICSAP AQLPVCKSLR SLAIKDCPGF TDASLAVVGM ICPQLENVNL SGLSAVTDSG FLPLIKSSNS
601: GLVNVDLNGC ENLTDAAVSA LVKAHGASLA HLSLEGCSKI TDASLFAISE SCSQLAELDL SNCMVSDYGV AVLAAAKQLR LRVLSLSGCM KVTQKSVPFL
701: GSMSSSLEGL NLQFNFIGNH NIASLEKQLW RCDILA
001: MSQIFSFAGE NDFYRRGAIY PNPKDASLLL SLGSFADVYF PPSKRSRVVA PTIFSAFEKK PVSIDVLPDE CLFEIFRRLS GPQERSACAF VSKQWLTLVS
101: SIRQKEIDVP SKITEDGDDC EGCLSRSLDG KKATDVRLAA IAVGTAGRGG LGKLSIRGSN SAKVSDLGLR SIGRSCPSLG SLSLWNVSTI TDNGLLEIAE
201: GCAQLEKLEL NRCSTITDKG LVAIAKSCPN LTELTLEACS RIGDEGLLAI ARSCSKLKSV SIKNCPLVRD QGIASLLSNT TCSLAKLKLQ MLNVTDVSLA
301: VVGHYGLSIT DLVLAGLSHV SEKGFWVMGN GVGLQKLNSL TITACQGVTD MGLESVGKGC PNMKKAIISK SPLLSDNGLV SFAKASLSLE SLQLEECHRV
401: TQFGFFGSLL NCGEKLKAFS LVNCLSIRDL TTGLPASSHC SALRSLSIRN CPGFGDANLA AIGKLCPQLE DIDLCGLKGI TESGFLHLIQ SSLVKINFSG
501: CSNLTDRVIS AITARNGWTL EVLNIDGCSN ITDASLVSIA ANCQILSDLD ISKCAISDSG IQALASSDKL KLQILSVAGC SMVTDKSLPA IVGLGSTLLG
601: LNLQQCRSIS NSTVDFLVER LYKCDILS
101: SIRQKEIDVP SKITEDGDDC EGCLSRSLDG KKATDVRLAA IAVGTAGRGG LGKLSIRGSN SAKVSDLGLR SIGRSCPSLG SLSLWNVSTI TDNGLLEIAE
201: GCAQLEKLEL NRCSTITDKG LVAIAKSCPN LTELTLEACS RIGDEGLLAI ARSCSKLKSV SIKNCPLVRD QGIASLLSNT TCSLAKLKLQ MLNVTDVSLA
301: VVGHYGLSIT DLVLAGLSHV SEKGFWVMGN GVGLQKLNSL TITACQGVTD MGLESVGKGC PNMKKAIISK SPLLSDNGLV SFAKASLSLE SLQLEECHRV
401: TQFGFFGSLL NCGEKLKAFS LVNCLSIRDL TTGLPASSHC SALRSLSIRN CPGFGDANLA AIGKLCPQLE DIDLCGLKGI TESGFLHLIQ SSLVKINFSG
501: CSNLTDRVIS AITARNGWTL EVLNIDGCSN ITDASLVSIA ANCQILSDLD ISKCAISDSG IQALASSDKL KLQILSVAGC SMVTDKSLPA IVGLGSTLLG
601: LNLQQCRSIS NSTVDFLVER LYKCDILS
Arabidopsis Description
EBF1EIN3-binding F-box protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SKK0]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.