Factsheet for HORVU5Hr1G029670.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
TargetP:	mitochondrion

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU3Hr1G050990.2
HORVU3Hr1G098530.4
HORVU4Hr1G051680.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G25490.1	HORVU4Hr1G051680.1	AT2G27050.1	14675533
AT2G25490.1	HORVU4Hr1G051680.1	AT3G20770.1	14675532
AT2G25490.1	HORVU4Hr1G051680.1	AT3G20770.1	14675533
AT2G25490.1	HORVU3Hr1G050990.2	AT3G28715.1	21798944
AT2G25490.1	HORVU3Hr1G098530.4	AT4G02570.1	14675533
AT5G25350.1	HORVU4Hr1G051680.1	AT3G20770.1	14675532
AT5G25350.1	HORVU4Hr1G051680.1	AT3G20770.1	14675533
AT5G25350.1	HORVU3Hr1G098530.4	AT4G02570.1	14675533

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU1Hr1G089690.1	Barley	cytosol, extracellular, mitochondrion	46.39	89.47
HORVU5Hr1G000950.4	Barley	plastid	67.84	77.85
HORVU7Hr1G090240.1	Barley	cytosol	69.4	66.05
TraesCS7D01G373800.1	Wheat	cytosol	77.97	61.44
TraesCS7B01G278800.1	Wheat	cytosol	77.39	61.36
TraesCS7A01G377500.1	Wheat	cytosol	76.8	60.71
EER90022	Sorghum	cytosol, plastid	64.13	52.56
Os06t0605900-01	Rice	cytosol	60.82	49.76
HORVU6Hr1G038430.3	Barley	plastid	57.5	45.18
Zm00001d036880_P003	Maize	cytosol	63.16	44.02
Zm00001d000408_P001	Maize	cytosol	63.16	43.61
PGSC0003DMT400094835	Potato	cytosol	17.35	36.33
GSMUA_Achr6P05220_001	Banana	cytosol	44.64	35.02
PGSC0003DMT400007545	Potato	cytosol	43.27	34.85
Solyc12g009560.1.1	Tomato	cytosol	42.69	34.38
GSMUA_Achr9P28510_001	Banana	cytosol, nucleus, peroxisome	43.27	33.95
GSMUA_Achr10P...	Banana	extracellular, plasma membrane, plastid	44.05	33.83
GSMUA_Achr4P30680_001	Banana	cytosol	42.88	33.74
KRH03688	Soybean	cytosol	41.52	33.33
VIT_11s0016g05410.t01	Wine grape	cytosol	42.88	33.18
Solyc06g030620.1.1	Tomato	cytosol	12.87	32.84
KRH05167	Soybean	cytosol	38.6	32.46
KRH15886	Soybean	cytosol	40.74	32.45
PGSC0003DMT400079445	Potato	cytosol, nucleus, peroxisome	40.55	32.4
KRH20255	Soybean	cytosol	40.35	32.39
Solyc07g008250.2.1	Tomato	cytosol, nucleus, peroxisome	40.35	32.29
CDX76980	Canola	cytosol	37.23	31.89
AT2G25490.1	Thale cress	plastid	38.99	31.85
KRH62989	Soybean	cytosol	40.35	31.85
VIT_04s0008g05470.t01	Wine grape	cytosol	41.13	31.63
Bra036542.1-P	Field mustard	cytosol	37.62	31.33
Bra034254.1-P	Field mustard	cytosol	37.82	31.19
CDY35358	Canola	cytosol	37.82	31.14
Solyc08g060810.2.1	Tomato	plastid	40.35	31.13
CDX87090	Canola	cytosol	37.23	31.01
PGSC0003DMT400040977	Potato	nucleus	40.16	30.79
CDY19807	Canola	cytosol	36.84	30.68
AT5G25350.1	Thale cress	cytosol	37.04	30.5
GSMUA_Achr2P15920_001	Banana	cytosol, peroxisome, plastid	39.57	30.39
KRH52439	Soybean	cytosol, nucleus, peroxisome	37.62	30.25
CDX80503	Canola	cytosol	36.26	29.95
KRH61771	Soybean	cytosol	37.04	29.87
CDX88173	Canola	cytosol	36.06	29.74
Bra009835.1-P	Field mustard	cytosol	35.87	29.58
Solyc06g030610.1.1	Tomato	cytosol	15.59	29.2
PGSC0003DMT400042949	Potato	cytosol	30.02	27.9
KRH04870	Soybean	cytosol	14.23	26.84
Solyc06g049010.1.1	Tomato	plastid	32.36	26.77
PGSC0003DMT400089433	Potato	mitochondrion	22.03	24.62
HORVU6Hr1G059950.1	Barley	cytosol	13.84	17.03
HORVU1Hr1G065030.2	Barley	cytosol	12.28	16.62
HORVU4Hr1G014630.1	Barley	cytosol	12.09	16.06
HORVU3Hr1G091200.4	Barley	cytosol	11.89	14.52
HORVU3Hr1G012530.12	Barley	cytosol	9.75	14.24
HORVU0Hr1G005070.1	Barley	plastid	15.01	13.8
HORVU5Hr1G050420.1	Barley	plastid	14.62	13.59
HORVU5Hr1G047420.2	Barley	cytosol, mitochondrion, plastid	17.54	13.33
HORVU5Hr1G024060.1	Barley	cytosol, plastid	19.88	12.1

Protein Annotations

EnsemblPlants:HORVU5Hr1G029670.1	EnsemblPlantsGene:HORVU5Hr1G029670	Gene3D:3.80.10.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_Cys-con_subtyp	InterPro:SCAB_CC
PANTHER:PTHR44327	PANTHER:PTHR44327:SF3	PFAM:PF13516	PFAM:PF16712	SEG:seg	SMART:SM00367
SUPFAM:SSF52047	UniParc:UPI000B47BA29	UniProt:A0A287QSI7	MapMan:11.5.2.6	MapMan:19.2.2.8.1.4.2	:

Description

No Description!

Coordinates

chrchr5H:+:178370028..178374066

Molecular Weight (calculated)

54328.7 Da

IEP (calculated)

7.539

GRAVY (calculated)

0.097

Length

513 amino acids

Sequence
(BLAST)

001: MAVCLSWTRQ RWLCSAACDN RAPPRHLRCR GGTPGGAGGQ EAVAEGGADT LHALPDGCLF EVLQRVQGAR AQGASSCVSH RWLALLGGIR AFEIKRAQAP
101: AVSDLNQVFV CEDEDEAGAE AASARPGRSE RTLEGEAATD VALTATDXXX XSVVVRGSHP THGVTDSGIS AVAGGCPSLR SLSLWDVPLV TDARLAEIAA
201: DCPSLEKLDI TGCPLVTNKG LVAVAQGCPD LKTLTIESCF DVANEGLKAI GRCSKLQAVN IKNCAYVGDQ GVAGLICSAT ASLAKVCLQG LSITDASLTV
301: IGYYGKAITN LTLTRLSSVG ERVFWVMANA VSLQKLRCMS ITSCPRVTEL ALVSIAKFCP SLKQLYLRKC SQISDGLLKD FAEASKVLEN LQIEECNRVT
401: LTGILSFLLN CSPKFKALSL VKCTGIKDIC STPAQLPVCK SLRSLTIKHC PGFTDSSLAV VGMICPHFYN NTEIEELRKE IREARQIKML HQPTSGLEHY
501: VESLMKRADI EFN

Best Arabidopsis Sequence Match ( AT2G25490.1 )
(BLAST)

001: MSQIFSFAGE NDFYRRGAIY PNPKDASLLL SLGSFADVYF PPSKRSRVVA PTIFSAFEKK PVSIDVLPDE CLFEIFRRLS GPQERSACAF VSKQWLTLVS
101: SIRQKEIDVP SKITEDGDDC EGCLSRSLDG KKATDVRLAA IAVGTAGRGG LGKLSIRGSN SAKVSDLGLR SIGRSCPSLG SLSLWNVSTI TDNGLLEIAE
201: GCAQLEKLEL NRCSTITDKG LVAIAKSCPN LTELTLEACS RIGDEGLLAI ARSCSKLKSV SIKNCPLVRD QGIASLLSNT TCSLAKLKLQ MLNVTDVSLA
301: VVGHYGLSIT DLVLAGLSHV SEKGFWVMGN GVGLQKLNSL TITACQGVTD MGLESVGKGC PNMKKAIISK SPLLSDNGLV SFAKASLSLE SLQLEECHRV
401: TQFGFFGSLL NCGEKLKAFS LVNCLSIRDL TTGLPASSHC SALRSLSIRN CPGFGDANLA AIGKLCPQLE DIDLCGLKGI TESGFLHLIQ SSLVKINFSG
501: CSNLTDRVIS AITARNGWTL EVLNIDGCSN ITDASLVSIA ANCQILSDLD ISKCAISDSG IQALASSDKL KLQILSVAGC SMVTDKSLPA IVGLGSTLLG
601: LNLQQCRSIS NSTVDFLVER LYKCDILS

Arabidopsis Description

EBF1EIN3-binding F-box protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SKK0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.