Factsheet for HORVU4Hr1G051680.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G089690.1
HORVU5Hr1G000950.4
HORVU5Hr1G029670.1
HORVU6Hr1G038430.3
HORVU7Hr1G090240.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G27050.1	HORVU1Hr1G089690.1	AT2G25490.1	14675533
AT2G27050.1	HORVU5Hr1G000950.4	AT2G25490.1	14675533
AT2G27050.1	HORVU5Hr1G029670.1	AT2G25490.1	14675533
AT2G27050.1	HORVU6Hr1G038430.3	AT2G25490.1	14675533
AT2G27050.1	HORVU7Hr1G090240.1	AT2G25490.1	14675533
AT2G27050.1	HORVU1Hr1G089690.1	AT5G25350.1	14675533
AT2G27050.1	HORVU5Hr1G000950.4	AT5G25350.1	14675533
AT2G27050.1	HORVU5Hr1G029670.1	AT5G25350.1	14675533
AT2G27050.1	HORVU6Hr1G038430.3	AT5G25350.1	14675533
AT2G27050.1	HORVU7Hr1G090240.1	AT5G25350.1	14675533
AT3G20770.1	HORVU1Hr1G089690.1	AT2G25490.1	14675532
AT3G20770.1	HORVU5Hr1G000950.4	AT2G25490.1	14675532
AT3G20770.1	HORVU5Hr1G029670.1	AT2G25490.1	14675532
AT3G20770.1	HORVU6Hr1G038430.3	AT2G25490.1	14675532
AT3G20770.1	HORVU7Hr1G090240.1	AT2G25490.1	14675532
AT3G20770.1	HORVU1Hr1G089690.1	AT2G25490.1	14675533
AT3G20770.1	HORVU5Hr1G000950.4	AT2G25490.1	14675533
AT3G20770.1	HORVU5Hr1G029670.1	AT2G25490.1	14675533
AT3G20770.1	HORVU6Hr1G038430.3	AT2G25490.1	14675533
AT3G20770.1	HORVU7Hr1G090240.1	AT2G25490.1	14675533
AT3G20770.1	HORVU1Hr1G089690.1	AT5G25350.1	14675532
AT3G20770.1	HORVU5Hr1G000950.4	AT5G25350.1	14675532
AT3G20770.1	HORVU5Hr1G029670.1	AT5G25350.1	14675532
AT3G20770.1	HORVU6Hr1G038430.3	AT5G25350.1	14675532
AT3G20770.1	HORVU7Hr1G090240.1	AT5G25350.1	14675532
AT3G20770.1	HORVU1Hr1G089690.1	AT5G25350.1	14675533
AT3G20770.1	HORVU5Hr1G000950.4	AT5G25350.1	14675533
AT3G20770.1	HORVU5Hr1G029670.1	AT5G25350.1	14675533
AT3G20770.1	HORVU6Hr1G038430.3	AT5G25350.1	14675533
AT3G20770.1	HORVU7Hr1G090240.1	AT5G25350.1	14675533

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G175100.1	Wheat	nucleus	96.47	96.62
TraesCS4D01G177000.1	Wheat	nucleus	96.47	96.47
TraesCS4A01G129400.1	Wheat	nucleus	80.95	96.34
Os03t0324300-02	Rice	nucleus	82.18	83.46
EER94933	Sorghum	nucleus	81.72	82.74
Os03t0324200-01	Rice	nucleus	81.57	82.45
Zm00001d028974_P001	Maize	nucleus	81.11	81.61
Zm00001d047563_P001	Maize	nucleus	79.57	80.69
GSMUA_Achr6P15930_001	Banana	nucleus	53.61	67.37
GSMUA_Achr10P...	Banana	nucleus	53.15	66.28
GSMUA_Achr5P27670_001	Banana	nucleus	56.22	58.37
GSMUA_Achr2P11540_001	Banana	nucleus	54.07	58.28
GSMUA_Achr9P17080_001	Banana	nucleus	54.22	56.75
GSMUA_Achr11P...	Banana	nucleus	51.15	56.25
GSMUA_Achr3P09440_001	Banana	nucleus	45.62	56.14
GSMUA_Achr8P21550_001	Banana	nucleus	54.38	55.84
CDX82228	Canola	nucleus	42.7	51.39
VIT_13s0047g00250.t01	Wine grape	nucleus	48.54	51.3
CDY32390	Canola	nucleus	42.7	50.64
HORVU0Hr1G011440.1	Barley	nucleus	29.95	50.39
Bra001802.1-P	Field mustard	nucleus	44.55	49.91
KRH18695	Soybean	nucleus	47.47	49.76
KRH14682	Soybean	nucleus	46.39	49.51
KRG89856	Soybean	nucleus	47.0	49.04
CDY38540	Canola	nucleus	42.4	49.02
CDY27563	Canola	nucleus	43.93	48.72
KRH73465	Soybean	nucleus	45.93	48.7
AT2G27050.1	Thale cress	nucleus	43.63	48.63
CDX83250	Canola	nucleus	42.4	48.42
Bra000528.1-P	Field mustard	nucleus	42.4	48.34
AT3G20770.1	Thale cress	nucleus	46.08	47.77
KRH18696	Soybean	nucleus	44.85	47.25
Solyc01g096810.2.1	Tomato	nucleus	43.32	46.92
PGSC0003DMT400070751	Potato	nucleus	42.86	46.66
CDY19606	Canola	nucleus	29.49	41.74
CDY06379	Canola	nucleus	30.88	41.27
Bra035746.1-P	Field mustard	nucleus	30.88	41.02
CDY60391	Canola	nucleus	26.42	40.47
Bra023927.1-P	Field mustard	nucleus	26.73	39.28
HORVU3Hr1G089250.3	Barley	nucleus	25.65	36.15
HORVU7Hr1G050560.1	Barley	nucleus	34.1	36.1
HORVU5Hr1G073380.1	Barley	nucleus	33.49	35.8
HORVU2Hr1G079900.1	Barley	nucleus	25.65	35.53
HORVU7Hr1G050590.1	Barley	nucleus	15.82	35.27

Protein Annotations

Gene3D:1.10.3180.10	MapMan:11.5.2.4	MapMan:15.5.11	EMBL:AK363891	ncoils:Coil	InterPro:Ethylene_insens-like_DNA-bd
UniProt:F2DJ23	GO:GO:0003674	GO:GO:0003700	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	EnsemblPlantsGene:HORVU4Hr1G051680	EnsemblPlants:HORVU4Hr1G051680.1	InterPro:IPR023278	PFAM:PF04873	PANTHER:PTHR33305
PANTHER:PTHR33305:SF11	SUPFAM:SSF116768	UniParc:UPI00020066E6	SEG:seg	:	:

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2DJ23]

Coordinates

chrchr4H:+:424867386..424871678

Molecular Weight (calculated)

71786.4 Da

IEP (calculated)

4.862

GRAVY (calculated)

-0.706

Length

651 amino acids

Sequence
(BLAST)

001: MMGGGGGLLM DQGMAFPGVH NFVDLLQQNG NDKNLGFGSL MPQTSSGDQC VMGEGDLVDP PTDNFPDAGE DDSDDDVDDI EELERRMWRD RMKLKRLKEL
101: QQSRGKEQAA GGGGVGDGLK PRQSQEQARR KKMSRAQDGI LKYMLKMMEV CRAQGFVYGI IPEKGKPVSG ASDNLRAWWK EKVRFDRNGP AAIAKYQADN
201: AVPGSESELA SGTASPHSLQ ELQDTTLGSL LSALMQHCDP PQRRFPLEKG ISPPWWPSGD EEWWPELGIP KDQGPPPYKK PHDLKKAWKV SVLTAVIKHM
301: SPDIEKIRRL VRQSKCLQDK MTAKEISTWL AVVKQEEELF MRLHPGARPP ATAAGGIASA ISFNASSSEY DVDVADDCKG DEAGTHKMAM ADPTAFNLGA
401: AILNDKFLMQ APMKEETADM EYVQKRSAVA AEPELMLNNR VYICNNVQCP HSDYGYGFLD RNARNSHQYT CKYNDALPPS AENKAAPPAP PQVFPAAAYN
501: QQNHGLNNLD FGLPMDGQRS IAELMNMYDT AFPANKNMGN DDVTIIERPN SLTPGTQMDE GFFGQGNGIG GNGDSMFSDV SNMMQQQQQQ QPQQQQQAPA
601: QQQFFIRDET PQFGNQMGGI SGASDFRFGS GFNMSGAVDY PQKNDGPNWY Y

Best Arabidopsis Sequence Match ( AT2G27050.1 )
(BLAST)

001: MMMFNEMGMY GNMDFFSSST SLDVCPLPQA EQEPVVEDVD YTDDEMDVDE LEKRMWRDKM RLKRLKEQQS KCKEGVDGSK QRQSQEQARR KKMSRAQDGI
101: LKYMLKMMEV CKAQGFVYGI IPEKGKPVTG ASDNLREWWK DKVRFDRNGP AAIAKYQSEN NISGGSNDCN SLVGPTPHTL QELQDTTLGS LLSALMQHCD
201: PPQRRFPLEK GVSPPWWPNG NEEWWPQLGL PNEQGPPPYK KPHDLKKAWK VGVLTAVIKH MSPDIAKIRK LVRQSKCLQD KMTAKESATW LAIINQEEVV
301: ARELYPESCP PLSSSSSLGS GSLLINDCSE YDVEGFEKEQ HGFDVEERKP EIVMMHPLAS FGVAKMQHFP IKEEVATTVN LEFTRKRKQN NDMNVMVMDR
401: SAGYTCENGQ CPHSKMNLGF QDRSSRDNHQ MVCPYRDNRL AYGASKFHMG GMKLVVPQQP VQPIDLSGVG VPENGQKMIT ELMAMYDRNV QSNQTPPTLM
501: ENQSMVIDAK AAQNQQLNFN SGNQMFMQQG TNNGVNNRFQ MVFDSTPFDM AAFDYRDDWQ TGAMEGMGKQ QQQQQQQQDV SIWF

Arabidopsis Description

EIL1ETHYLENE INSENSITIVE 3-like 1 protein [Source:UniProtKB/Swiss-Prot;Acc:Q9SLH0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.