Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY60391 | Canola | nucleus | 62.35 | 86.12 |
| CDX82228 | Canola | nucleus | 75.47 | 81.89 |
| CDY19606 | Canola | nucleus | 64.05 | 81.74 |
| CDY32390 | Canola | nucleus | 75.98 | 81.24 |
| AT3G20770.1 | Thale cress | nucleus | 86.2 | 80.57 |
| CDY06379 | Canola | nucleus | 66.44 | 80.08 |
| CDY38540 | Canola | nucleus | 63.71 | 66.43 |
| CDX83250 | Canola | nucleus | 64.22 | 66.14 |
| KRG89856 | Soybean | nucleus | 64.57 | 60.74 |
| KRH18695 | Soybean | nucleus | 63.2 | 59.74 |
| KRH14682 | Soybean | nucleus | 61.16 | 58.85 |
| KRH73465 | Soybean | nucleus | 61.33 | 58.63 |
| KRH18696 | Soybean | nucleus | 60.99 | 57.93 |
| Solyc06g073720.1.1 | Tomato | nucleus | 59.63 | 57.38 |
| VIT_06s0009g01380.t01 | Wine grape | nucleus | 58.94 | 56.72 |
| Solyc06g073730.1.1 | Tomato | nucleus | 58.43 | 56.69 |
| PGSC0003DMT400022477 | Potato | nucleus | 59.28 | 56.68 |
| PGSC0003DMT400015148 | Potato | nucleus | 58.6 | 56.39 |
| PGSC0003DMT400015145 | Potato | nucleus | 57.24 | 56.09 |
| Solyc01g009170.2.1 | Tomato | nucleus | 58.6 | 56.03 |
| GSMUA_Achr6P15930_001 | Banana | nucleus | 47.53 | 53.86 |
| GSMUA_Achr10P... | Banana | nucleus | 46.68 | 52.49 |
| TraesCS4A01G129400.1 | Wheat | nucleus | 44.8 | 48.08 |
| GSMUA_Achr3P09440_001 | Banana | nucleus | 42.59 | 47.26 |
| CDY70411 | Canola | nucleus | 13.46 | 47.02 |
| GSMUA_Achr9P17080_001 | Banana | nucleus | 49.57 | 46.78 |
| GSMUA_Achr5P27670_001 | Banana | nucleus | 49.91 | 46.73 |
| GSMUA_Achr2P11540_001 | Banana | nucleus | 48.04 | 46.69 |
| GSMUA_Achr8P21550_001 | Banana | nucleus | 50.09 | 46.37 |
| EER94933 | Sorghum | nucleus | 49.23 | 44.95 |
| CDY46568 | Canola | nucleus | 12.78 | 44.64 |
| Zm00001d022530_P001 | Maize | nucleus | 34.41 | 44.49 |
| Zm00001d047563_P001 | Maize | nucleus | 48.55 | 44.39 |
| Zm00001d028974_P001 | Maize | nucleus | 48.89 | 44.36 |
| CDX81161 | Canola | nucleus | 14.48 | 44.27 |
| TraesCS4B01G175100.1 | Wheat | nucleus | 48.89 | 44.15 |
| GSMUA_Achr11P... | Banana | nucleus | 44.46 | 44.09 |
| TraesCS4D01G177000.1 | Wheat | nucleus | 48.89 | 44.09 |
| HORVU4Hr1G051680.1 | Barley | nucleus | 48.72 | 43.93 |
| Zm00001d007188_P001 | Maize | nucleus | 44.29 | 43.7 |
| OQU90496 | Sorghum | nucleus | 43.1 | 42.59 |
| TraesCS2D01G099400.1 | Wheat | nucleus | 44.46 | 42.1 |
| TraesCS2A01G099900.1 | Wheat | nucleus | 44.29 | 42.07 |
| TraesCS2B01G116900.1 | Wheat | nucleus | 43.78 | 41.52 |
| Os02t0689132-00 | Rice | nucleus | 11.93 | 39.55 |
| CDX85778 | Canola | nucleus | 30.15 | 38.9 |
| CDY40078 | Canola | nucleus | 29.81 | 38.63 |
| CDX92408 | Canola | nucleus | 32.71 | 38.48 |
| CDY59518 | Canola | nucleus | 33.22 | 38.31 |
| CDY47740 | Canola | nucleus | 35.95 | 36.25 |
| CDY60137 | Canola | nucleus | 35.6 | 35.6 |
| CDX73009 | Canola | nucleus | 35.43 | 35.56 |
| CDY11093 | Canola | nucleus | 34.07 | 35.4 |
| CDY09099 | Canola | nucleus | 20.61 | 31.19 |
| CDX78369 | Canola | nucleus | 16.35 | 29.18 |
| CDY08821 | Canola | nucleus | 15.84 | 26.2 |
| CDY14539 | Canola | nucleus | 15.84 | 25.0 |
Protein Annotations
| Gene3D:1.10.3180.10 | MapMan:11.5.2.4 | MapMan:15.5.11 | GO:A0A078GSK2 | UniProt:A0A078GSK2 | EnsemblPlants:CDY27563 |
| ProteinID:CDY27563 | ProteinID:CDY27563.1 | ncoils:Coil | InterPro:Ethylene_insens-like_DNA-bd | GO:GO:0003674 | GO:GO:0003700 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00038285001 | InterPro:IPR023278 |
| PFAM:PF04873 | PANTHER:PTHR33305 | PANTHER:PTHR33305:SF1 | SUPFAM:SSF116768 | UniParc:UPI0004EDCB8E | SEG:seg |
Description
BnaC01g32460DBnaC01g32460D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GSK2]
Coordinates
chrLK032206:+:469304..471951
Molecular Weight (calculated)
66604.8 Da
IEP (calculated)
5.246
GRAVY (calculated)
-0.726
Length
587 amino acids
Sequence
(BLAST)
(BLAST)
001: MMFNEMGMLG GNVDFYSCSS LGELDLCPAP QPELDSIVED DYTDDDEIDV DELERRMWRD KMRLKRLKEQ QQDNKSSKQG VDYDSAKQRQ SQEQARRKKM
101: SRAQDGILKY MLKMMEVCKA QGFVYGIIPE NGKPVIGASD NLREWWKDKV RFDRNGPAAI AKYQAENNVP GVCESNGLIG PTPHTLQELQ DTTLGSLLSA
201: LMQHCDPPQR RFPLEKGVPP PWWPSGKEDW WCQLGLGKDQ GPAPYKKPHD LKKAWKVGVL TAVIKHMFPD VGKIRKLVRQ SKCLQDKMTA KESATWLAII
301: NQEEALAREL YPESCPPLSS LSGGGNCSLL MNDCGQYDVE GFEKETRYEV EEVKPVKEEV SSEFMRKRKA NRDLNAVMER TVFTCENPGC VHSEISRGFL
401: DRNSRDNHQL GCPHRDSCVL YGAGPSRFHV NEPIDLTGIG VPEDGQKMIS ELMSMYDRNV QSNQTPMVME NQNVSLLQPM VQNQFQGNMV EGGFFEEFNI
501: PNRAKNNNSS NQMFFQGNNN GFNYDTAHNN NFEVAHNNSS SNRFQGVYDS APFDMASLVY RDDMSVPGVV GTMDGMQQKQ HDVSMWF
101: SRAQDGILKY MLKMMEVCKA QGFVYGIIPE NGKPVIGASD NLREWWKDKV RFDRNGPAAI AKYQAENNVP GVCESNGLIG PTPHTLQELQ DTTLGSLLSA
201: LMQHCDPPQR RFPLEKGVPP PWWPSGKEDW WCQLGLGKDQ GPAPYKKPHD LKKAWKVGVL TAVIKHMFPD VGKIRKLVRQ SKCLQDKMTA KESATWLAII
301: NQEEALAREL YPESCPPLSS LSGGGNCSLL MNDCGQYDVE GFEKETRYEV EEVKPVKEEV SSEFMRKRKA NRDLNAVMER TVFTCENPGC VHSEISRGFL
401: DRNSRDNHQL GCPHRDSCVL YGAGPSRFHV NEPIDLTGIG VPEDGQKMIS ELMSMYDRNV QSNQTPMVME NQNVSLLQPM VQNQFQGNMV EGGFFEEFNI
501: PNRAKNNNSS NQMFFQGNNN GFNYDTAHNN NFEVAHNNSS SNRFQGVYDS APFDMASLVY RDDMSVPGVV GTMDGMQQKQ HDVSMWF
001: MMFNEMGMCG NMDFFSSGSL GEVDFCPVPQ AEPDSIVEDD YTDDEIDVDE LERRMWRDKM RLKRLKEQDK GKEGVDAAKQ RQSQEQARRK KMSRAQDGIL
101: KYMLKMMEVC KAQGFVYGII PENGKPVTGA SDNLREWWKD KVRFDRNGPA AITKYQAENN IPGIHEGNNP IGPTPHTLQE LQDTTLGSLL SALMQHCDPP
201: QRRFPLEKGV PPPWWPNGKE DWWPQLGLPK DQGPAPYKKP HDLKKAWKVG VLTAVIKHMF PDIAKIRKLV RQSKCLQDKM TAKESATWLA IINQEESLAR
301: ELYPESCPPL SLSGGSCSLL MNDCSQYDVE GFEKESHYEV EELKPEKVMN SSNFGMVAKM HDFPVKEEVP AGNSEFMRKR KPNRDLNTIM DRTVFTCENL
401: GCAHSEISRG FLDRNSRDNH QLACPHRDSR LPYGAAPSRF HVNEVKPVVG FPQPRPVNSV AQPIDLTGIV PEDGQKMISE LMSMYDRNVQ SNQTSMVMEN
501: QSVSLLQPTV HNHQEHLQFP GNMVEGSFFE DLNIPNRANN NNSSNNQTFF QGNNNNNNVF KFDTADHNNF EAAHNNNNNS SGNRFQLVFD STPFDMASFD
601: YRDDMSMPGV VGTMDGMQQK QQDVSIWF
101: KYMLKMMEVC KAQGFVYGII PENGKPVTGA SDNLREWWKD KVRFDRNGPA AITKYQAENN IPGIHEGNNP IGPTPHTLQE LQDTTLGSLL SALMQHCDPP
201: QRRFPLEKGV PPPWWPNGKE DWWPQLGLPK DQGPAPYKKP HDLKKAWKVG VLTAVIKHMF PDIAKIRKLV RQSKCLQDKM TAKESATWLA IINQEESLAR
301: ELYPESCPPL SLSGGSCSLL MNDCSQYDVE GFEKESHYEV EELKPEKVMN SSNFGMVAKM HDFPVKEEVP AGNSEFMRKR KPNRDLNTIM DRTVFTCENL
401: GCAHSEISRG FLDRNSRDNH QLACPHRDSR LPYGAAPSRF HVNEVKPVVG FPQPRPVNSV AQPIDLTGIV PEDGQKMISE LMSMYDRNVQ SNQTSMVMEN
501: QSVSLLQPTV HNHQEHLQFP GNMVEGSFFE DLNIPNRANN NNSSNNQTFF QGNNNNNNVF KFDTADHNNF EAAHNNNNNS SGNRFQLVFD STPFDMASFD
601: YRDDMSMPGV VGTMDGMQQK QQDVSIWF
Arabidopsis Description
EIN3Protein ETHYLENE INSENSITIVE 3 [Source:UniProtKB/Swiss-Prot;Acc:O24606]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.