CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX92408	Canola	nucleus	93.91	95.79
AT5G21120.2	Thale cress	nucleus	62.87	60.95
CDY09099	Canola	nucleus	45.78	60.05
CDY70411	Canola	nucleus	12.97	39.29
CDY46568	Canola	nucleus	12.97	39.29
CDY32390	Canola	nucleus	38.7	35.88
CDX82228	Canola	nucleus	38.11	35.86
CDY38540	Canola	nucleus	38.11	34.46
CDX83250	Canola	nucleus	38.31	34.21
CDX81161	Canola	nucleus	12.57	33.33
CDY27563	Canola	nucleus	38.31	33.22
CDY40078	Canola	nucleus	27.5	30.91
CDX85778	Canola	nucleus	27.5	30.77
CDY06379	Canola	nucleus	25.54	26.69
CDY60137	Canola	nucleus	30.65	26.58
CDX73009	Canola	nucleus	30.45	26.5
CDY19606	Canola	nucleus	23.77	26.3
CDY11093	Canola	nucleus	28.68	25.84
CDY47740	Canola	nucleus	29.47	25.77
CDY60391	Canola	nucleus	21.41	25.65
CDY08821	Canola	nucleus	15.72	22.54
CDY14539	Canola	nucleus	16.31	22.31
CDX78369	Canola	nucleus	13.95	21.58

Protein Annotations

Gene3D:1.10.3180.10	MapMan:11.5.2.4	MapMan:15.5.11	GO:A0A078J7U2	UniProt:A0A078J7U2	EnsemblPlants:CDY59518
ProteinID:CDY59518	ProteinID:CDY59518.1	ncoils:Coil	InterPro:Ethylene_insens-like_DNA-bd	GO:GO:0003674	GO:GO:0003700
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSBRNA2T00026202001	InterPro:IPR023278
PFAM:PF04873	PANTHER:PTHR33305	PANTHER:PTHR33305:SF1	SUPFAM:SSF116768	UniParc:UPI0004EEA717	SEG:seg

Description

BnaCnng35080DBnaCnng35080D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J7U2]

Coordinates

chrLK033772:-:29034..30728

Molecular Weight (calculated)

57923.9 Da

IEP (calculated)

6.648

GRAVY (calculated)

-0.942

Length

509 amino acids

Sequence
(BLAST)

001: MYNTNIGMFP TLVTSPVPRF PEGETCFASL NTTCNDPTEE EMEIEELEKK IWKDKQRLKQ LKEMSKNGLG RASLKQPPDD EHSRKRMMYQ AQDGILKYMS
101: KTMERCKAQG FVYGVVFQNG KTVTGSSDNL RGWWRDQVRF DRNGPAAILK HQREINLSAT DGNELGYSED GGECTAHKLL ELQDTTLGAL LSALMPNCKP
201: PQRRYPLEKG VPPPWWPTGK EDWWGDLPLP DGCRGHPPAY RKPHGLKKMW KVGILIGVIR HMMASDINDI AKLVGRSTTL QEKMTSREGS LWLAALNREK
301: AIASQSQEQP LTFSEEDGTG GETDTLFPEP ADYDVEGSVG PRHRLNRQFH GFDNNNFNSV YNNKRRFEGE SLHPGTNLTC ENSPCPYSRP EMGFNDRVLR
401: ENHQMTCPYK QPTEPFYQPA EPFGMPYPDY NRSFYGNRPE SQSIPDNFTQ SNNLYRPKAA ERGGNTSVMN HNTNNGYAQT NTNNGYAQTV GMENYHQNQD
501: QDLSMPWIQ

Best Arabidopsis Sequence Match ( AT5G21120.2 )
(BLAST)

001: MTLFADSMDM YNNNIGMFRS LVCSSAPPFT EGHMCSDSHT ALCDDLSSDE EMEIEELEKK IWRDKQRLKR LKEMAKNGLG TRLLLKQQHD DFPEHSSKRT
101: MYKAQDGILK YMSKTMERYK AQGFVYGIVL ENGKTVAGSS DNLREWWKDK VRFDRNGPAA IIKHQRDINL SDGSDSGSEV GDSTAQKLLE LQDTTLGALL
201: SALFPHCNPP QRRFPLEKGV TPPWWPTGKE DWWDQLSLPV DFRGVPPPYK KPHDLKKLWK IGVLIGVIRH MASDISNIPN LVRRSRSLQE KMTSREGALW
301: LAALYREKAI VDQIAMSREN NNTSNFLVPA TGGDPDVLFP ESTDYDVELI GGTHRTNQQY PEFENNYNCV YKRKFEEDFG MPMHPTLLTC ENSLCPYSQP
401: HMGFLDRNLR ENHQMTCPYK VTSFYQPTKP YGMTGLMVPC PDYNGMQQQV QSFQDQFNHP NDLYRPKAPQ RGNDDLVEDL NPSPSTLNQN LGLVLPTDFN
501: GGEETVGTEN NLHNQGQELP TSWIQ

Arabidopsis Description

EIL2ETHYLENE-INSENSITIVE3-like 2 [Source:TAIR;Acc:AT5G21120]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.