CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX76980
CDX80503
CDX87090
CDX88173
CDY19807
CDY35358

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G27050.1	CDX76980	AT2G25490.1	14675533
AT2G27050.1	CDY35358	AT2G25490.1	14675533
AT2G27050.1	CDX80503	AT5G25350.1	14675533
AT2G27050.1	CDX87090	AT5G25350.1	14675533
AT2G27050.1	CDX88173	AT5G25350.1	14675533
AT2G27050.1	CDY19807	AT5G25350.1	14675533

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra000528.1-P	Field mustard	nucleus	97.89	97.72
CDY38540	Canola	nucleus	95.44	96.63
AT2G27050.1	Thale cress	nucleus	83.33	81.34
CDY32390	Canola	nucleus	67.89	70.49
CDX82228	Canola	nucleus	66.67	70.24
CDY27563	Canola	nucleus	66.14	64.22
CDY19606	Canola	nucleus	48.6	60.22
CDY06379	Canola	nucleus	50.88	59.55
KRH14682	Soybean	nucleus	63.33	59.18
KRG89856	Soybean	nucleus	64.74	59.13
CDY60391	Canola	nucleus	44.04	59.06
KRH18695	Soybean	nucleus	64.04	58.78
KRH73465	Soybean	nucleus	63.16	58.63
KRH18696	Soybean	nucleus	63.51	58.58
Solyc06g073720.1.1	Tomato	nucleus	61.75	57.7
PGSC0003DMT400015148	Potato	nucleus	60.53	56.56
VIT_06s0009g01380.t01	Wine grape	nucleus	60.18	56.23
Solyc06g073730.1.1	Tomato	nucleus	59.3	55.87
PGSC0003DMT400022477	Potato	nucleus	60.18	55.86
PGSC0003DMT400015145	Potato	nucleus	57.54	54.76
Solyc01g009170.2.1	Tomato	nucleus	58.95	54.72
GSMUA_Achr6P15930_001	Banana	nucleus	49.12	54.05
GSMUA_Achr10P...	Banana	nucleus	48.07	52.49
TraesCS4A01G129400.1	Wheat	nucleus	46.49	48.45
GSMUA_Achr2P11540_001	Banana	nucleus	50.53	47.68
GSMUA_Achr3P09440_001	Banana	nucleus	42.98	46.31
GSMUA_Achr5P27670_001	Banana	nucleus	50.88	46.25
GSMUA_Achr11P...	Banana	nucleus	47.19	45.44
GSMUA_Achr8P21550_001	Banana	nucleus	50.18	45.11
CDY70411	Canola	nucleus	13.16	44.64
CDX81161	Canola	nucleus	14.91	44.27
GSMUA_Achr9P17080_001	Banana	nucleus	48.25	44.21
EER94933	Sorghum	nucleus	49.65	44.01
Zm00001d028974_P001	Maize	nucleus	49.65	43.74
TraesCS4B01G175100.1	Wheat	nucleus	49.47	43.38
Zm00001d047563_P001	Maize	nucleus	48.77	43.3
Zm00001d022530_P001	Maize	nucleus	34.39	43.17
TraesCS4D01G177000.1	Wheat	nucleus	49.3	43.16
Zm00001d007188_P001	Maize	nucleus	44.39	42.52
HORVU4Hr1G051680.1	Barley	nucleus	48.42	42.4
CDY46568	Canola	nucleus	12.46	42.26
OQU90496	Sorghum	nucleus	43.33	41.58
TraesCS2A01G099900.1	Wheat	nucleus	44.56	41.1
TraesCS2D01G099400.1	Wheat	nucleus	44.39	40.81
TraesCS2B01G116900.1	Wheat	nucleus	44.21	40.71
Os02t0689132-00	Rice	nucleus	12.46	40.11
CDY40078	Canola	nucleus	31.05	39.07
CDX85778	Canola	nucleus	31.05	38.9
CDX92408	Canola	nucleus	34.04	38.88
CDY59518	Canola	nucleus	34.21	38.31
CDX73009	Canola	nucleus	36.49	35.56
CDY60137	Canola	nucleus	36.49	35.43
CDY47740	Canola	nucleus	35.61	34.88
CDY11093	Canola	nucleus	34.56	34.87
CDY09099	Canola	nucleus	22.28	32.73
CDX78369	Canola	nucleus	17.19	29.79
CDY08821	Canola	nucleus	17.37	27.89
CDY14539	Canola	nucleus	17.37	26.61

Protein Annotations

Gene3D:1.10.3180.10	MapMan:11.5.2.4	MapMan:15.5.11	GO:A0A078D2A8	EnsemblPlants:CDX83250	ProteinID:CDX83250
ProteinID:CDX83250.1	ncoils:Coil	InterPro:Ethylene_insens-like_DNA-bd	GO:GO:0003674	GO:GO:0003700	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSBRNA2T00138800001	InterPro:IPR023278	PFAM:PF04873	PANTHER:PTHR33305
PANTHER:PTHR33305:SF1	SUPFAM:SSF116768	UniParc:UPI0004EE1845	SEG:seg	:	:

Description

BnaA03g22560D

Coordinates

chrLK031832:-:650056..652387

Molecular Weight (calculated)

64987.2 Da

IEP (calculated)

6.211

GRAVY (calculated)

-0.716

Length

570 amino acids

Sequence
(BLAST)

001: MMMFNEMGMY GNMDLFSSTS LGETDVCPFP KDHSVVEDDY TDDEVDVDEL ERRMWRDKMR LKRLKEQQSK CKEEVDASKQ QRQSQEQARR KKMSRAQDGI
101: LKYMLKMMEV CKAQGFVYGI IPEKGKPVTG ASDNLREWWK DKVRFDRNGP AAIAKYQAEN SIAGGSNDCN SLVGPTPHTL QELQDTTLGS LLSALMQHCD
201: PPQRRFPLEK GVPPPWWPNG REEWWPQLGL PSDQASPPYK KPHDLKKAWK VGVLTAVIKH MSPDITKIRK LVRQSKCLQD KMTAKESATW LAIINQEEVV
301: ARELYPESCL PLSSSSVGSG SLLINDCSEY DVECFDKEQQ QSFDGEELKP EIVVSMNHPT SFGICRMQQF PVKEEVVATV GNLKRKQNND LNVMMMERPG
401: FTCENGQCPH SKINLGFHDR SSRDNHQMVC PYRDNRLAYG VKPVVVSQQS QPFPQPVQPV DLSGYGVPKN GQKMITELMA MYDRNVQSSQ ASNQSMIINS
501: TAAQNYQEHQ LSFNRNQMFM QQGNSEINNQ SQMVFDSTSF DIASFDYKND WQAGVMEGMG KQQQDVSIWF

Best Arabidopsis Sequence Match ( AT2G27050.1 )
(BLAST)

001: MMMFNEMGMY GNMDFFSSST SLDVCPLPQA EQEPVVEDVD YTDDEMDVDE LEKRMWRDKM RLKRLKEQQS KCKEGVDGSK QRQSQEQARR KKMSRAQDGI
101: LKYMLKMMEV CKAQGFVYGI IPEKGKPVTG ASDNLREWWK DKVRFDRNGP AAIAKYQSEN NISGGSNDCN SLVGPTPHTL QELQDTTLGS LLSALMQHCD
201: PPQRRFPLEK GVSPPWWPNG NEEWWPQLGL PNEQGPPPYK KPHDLKKAWK VGVLTAVIKH MSPDIAKIRK LVRQSKCLQD KMTAKESATW LAIINQEEVV
301: ARELYPESCP PLSSSSSLGS GSLLINDCSE YDVEGFEKEQ HGFDVEERKP EIVMMHPLAS FGVAKMQHFP IKEEVATTVN LEFTRKRKQN NDMNVMVMDR
401: SAGYTCENGQ CPHSKMNLGF QDRSSRDNHQ MVCPYRDNRL AYGASKFHMG GMKLVVPQQP VQPIDLSGVG VPENGQKMIT ELMAMYDRNV QSNQTPPTLM
501: ENQSMVIDAK AAQNQQLNFN SGNQMFMQQG TNNGVNNRFQ MVFDSTPFDM AAFDYRDDWQ TGAMEGMGKQ QQQQQQQQDV SIWF

Arabidopsis Description

EIL1ETHYLENE INSENSITIVE 3-like 1 protein [Source:UniProtKB/Swiss-Prot;Acc:Q9SLH0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.