Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra000528.1-P | Field mustard | nucleus | 98.05 | 96.67 |
| CDX83250 | Canola | nucleus | 96.63 | 95.44 |
| AT2G27050.1 | Thale cress | nucleus | 84.37 | 81.34 |
| CDY32390 | Canola | nucleus | 68.56 | 70.31 |
| CDX82228 | Canola | nucleus | 67.32 | 70.06 |
| CDY27563 | Canola | nucleus | 66.43 | 63.71 |
| CDY19606 | Canola | nucleus | 49.02 | 60.0 |
| CDY06379 | Canola | nucleus | 51.33 | 59.34 |
| CDY60391 | Canola | nucleus | 44.41 | 58.82 |
| KRH14682 | Soybean | nucleus | 63.59 | 58.69 |
| KRG89856 | Soybean | nucleus | 64.83 | 58.49 |
| KRH73465 | Soybean | nucleus | 63.59 | 58.31 |
| KRH18695 | Soybean | nucleus | 64.3 | 58.29 |
| KRH18696 | Soybean | nucleus | 63.77 | 58.09 |
| Solyc06g073720.1.1 | Tomato | nucleus | 62.17 | 57.38 |
| PGSC0003DMT400015148 | Potato | nucleus | 60.92 | 56.23 |
| VIT_06s0009g01380.t01 | Wine grape | nucleus | 60.39 | 55.74 |
| PGSC0003DMT400022477 | Potato | nucleus | 60.57 | 55.54 |
| Solyc06g073730.1.1 | Tomato | nucleus | 59.68 | 55.54 |
| Solyc01g009170.2.1 | Tomato | nucleus | 59.68 | 54.72 |
| PGSC0003DMT400015145 | Potato | nucleus | 57.9 | 54.42 |
| GSMUA_Achr6P15930_001 | Banana | nucleus | 49.38 | 53.67 |
| GSMUA_Achr10P... | Banana | nucleus | 48.31 | 52.11 |
| TraesCS4A01G129400.1 | Wheat | nucleus | 46.89 | 48.26 |
| GSMUA_Achr2P11540_001 | Banana | nucleus | 50.62 | 47.19 |
| GSMUA_Achr3P09440_001 | Banana | nucleus | 43.34 | 46.12 |
| GSMUA_Achr5P27670_001 | Banana | nucleus | 51.33 | 46.09 |
| CDY70411 | Canola | nucleus | 13.68 | 45.83 |
| GSMUA_Achr11P... | Banana | nucleus | 47.42 | 45.1 |
| GSMUA_Achr8P21550_001 | Banana | nucleus | 49.91 | 44.32 |
| CDX81161 | Canola | nucleus | 15.1 | 44.27 |
| GSMUA_Achr9P17080_001 | Banana | nucleus | 48.49 | 43.89 |
| EER94933 | Sorghum | nucleus | 50.09 | 43.86 |
| Zm00001d028974_P001 | Maize | nucleus | 50.09 | 43.59 |
| TraesCS4B01G175100.1 | Wheat | nucleus | 49.91 | 43.23 |
| Zm00001d047563_P001 | Maize | nucleus | 49.2 | 43.15 |
| TraesCS4D01G177000.1 | Wheat | nucleus | 49.73 | 43.01 |
| CDY46568 | Canola | nucleus | 12.79 | 42.86 |
| Zm00001d022530_P001 | Maize | nucleus | 34.28 | 42.51 |
| HORVU4Hr1G051680.1 | Barley | nucleus | 49.02 | 42.4 |
| Zm00001d007188_P001 | Maize | nucleus | 44.23 | 41.85 |
| OQU90496 | Sorghum | nucleus | 43.34 | 41.08 |
| TraesCS2A01G099900.1 | Wheat | nucleus | 44.94 | 40.94 |
| TraesCS2D01G099400.1 | Wheat | nucleus | 44.76 | 40.65 |
| TraesCS2B01G116900.1 | Wheat | nucleus | 44.58 | 40.55 |
| Os02t0689132-00 | Rice | nucleus | 12.26 | 38.98 |
| CDY40078 | Canola | nucleus | 31.26 | 38.85 |
| CDX85778 | Canola | nucleus | 31.26 | 38.68 |
| CDX92408 | Canola | nucleus | 34.1 | 38.48 |
| CDY59518 | Canola | nucleus | 34.46 | 38.11 |
| CDX73009 | Canola | nucleus | 36.77 | 35.38 |
| CDY60137 | Canola | nucleus | 36.77 | 35.26 |
| CDY11093 | Canola | nucleus | 34.81 | 34.69 |
| CDY47740 | Canola | nucleus | 35.7 | 34.54 |
| CDY09099 | Canola | nucleus | 22.56 | 32.73 |
| CDX78369 | Canola | nucleus | 17.41 | 29.79 |
| CDY08821 | Canola | nucleus | 17.58 | 27.89 |
| CDY14539 | Canola | nucleus | 17.58 | 26.61 |
Protein Annotations
| Gene3D:1.10.3180.10 | MapMan:11.5.2.4 | MapMan:15.5.11 | GO:A0A078HJC2 | UniProt:A0A078HJC2 | EnsemblPlants:CDY38540 |
| ProteinID:CDY38540 | ProteinID:CDY38540.1 | ncoils:Coil | InterPro:Ethylene_insens-like_DNA-bd | GO:GO:0003674 | GO:GO:0003700 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00066199001 | InterPro:IPR023278 |
| PFAM:PF04873 | PANTHER:PTHR33305 | PANTHER:PTHR33305:SF1 | SUPFAM:SSF116768 | UniParc:UPI0004EE7EFC | SEG:seg |
Description
BnaC03g26570DBnaC03g26570D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HJC2]
Coordinates
chrLK032425:-:300865..303444
Molecular Weight (calculated)
64378.6 Da
IEP (calculated)
5.798
GRAVY (calculated)
-0.702
Length
563 amino acids
Sequence
(BLAST)
(BLAST)
001: MMMFNEMGMY GNMDFFSSTS LGETDVCPFP KDHPVVEDDY TDDEVDVDEL ERRMWRDKMR LKRLKEQQSK CKEGVDASKQ QRQSQEQARR KKMSRAQDGI
101: LKYMLKMMEV CKAQGFVYGI IPEKGKPVTG ASDNLREWWK DKVRFDRNGP AAIAKYQAEN NIAGGSNDCN SFVGPTPHTL QELQDTTLGS LLSALMQHCD
201: PPQRRFPLEK GVPPPWWPNG REEWWPLLSL PSDQASPPYK KPHDLKKAWK VGVLTAVIKH MSPDIAKIRK LVRQSKCLQD KMTAKESATW LAIINQEEVV
301: ARELYPESCL PLSSKSVGSG SLLINDCSEY DVECFDKEQQ QSFDVEELKP EIVVSMNRPT SFGICRMQQF PVKEEVVATV GNLKRKQNND LNVLMMMERP
401: GFTCENGQCP HSKINLGFQD RSSRDNHQMV CPYRDNLVVS QQSQPFPQPV QPIDLSGYGV PKNGQKMITE LMAMYDRNVQ SSQASNQSMI IDSTAAQNYQ
501: EQQLCFNRNQ MFMQQGNSEI NNQSQMVFDS TSFDISSFDY KNDWQAGVME GMGKQQQDVS IWF
101: LKYMLKMMEV CKAQGFVYGI IPEKGKPVTG ASDNLREWWK DKVRFDRNGP AAIAKYQAEN NIAGGSNDCN SFVGPTPHTL QELQDTTLGS LLSALMQHCD
201: PPQRRFPLEK GVPPPWWPNG REEWWPLLSL PSDQASPPYK KPHDLKKAWK VGVLTAVIKH MSPDIAKIRK LVRQSKCLQD KMTAKESATW LAIINQEEVV
301: ARELYPESCL PLSSKSVGSG SLLINDCSEY DVECFDKEQQ QSFDVEELKP EIVVSMNRPT SFGICRMQQF PVKEEVVATV GNLKRKQNND LNVLMMMERP
401: GFTCENGQCP HSKINLGFQD RSSRDNHQMV CPYRDNLVVS QQSQPFPQPV QPIDLSGYGV PKNGQKMITE LMAMYDRNVQ SSQASNQSMI IDSTAAQNYQ
501: EQQLCFNRNQ MFMQQGNSEI NNQSQMVFDS TSFDISSFDY KNDWQAGVME GMGKQQQDVS IWF
001: MMMFNEMGMY GNMDFFSSST SLDVCPLPQA EQEPVVEDVD YTDDEMDVDE LEKRMWRDKM RLKRLKEQQS KCKEGVDGSK QRQSQEQARR KKMSRAQDGI
101: LKYMLKMMEV CKAQGFVYGI IPEKGKPVTG ASDNLREWWK DKVRFDRNGP AAIAKYQSEN NISGGSNDCN SLVGPTPHTL QELQDTTLGS LLSALMQHCD
201: PPQRRFPLEK GVSPPWWPNG NEEWWPQLGL PNEQGPPPYK KPHDLKKAWK VGVLTAVIKH MSPDIAKIRK LVRQSKCLQD KMTAKESATW LAIINQEEVV
301: ARELYPESCP PLSSSSSLGS GSLLINDCSE YDVEGFEKEQ HGFDVEERKP EIVMMHPLAS FGVAKMQHFP IKEEVATTVN LEFTRKRKQN NDMNVMVMDR
401: SAGYTCENGQ CPHSKMNLGF QDRSSRDNHQ MVCPYRDNRL AYGASKFHMG GMKLVVPQQP VQPIDLSGVG VPENGQKMIT ELMAMYDRNV QSNQTPPTLM
501: ENQSMVIDAK AAQNQQLNFN SGNQMFMQQG TNNGVNNRFQ MVFDSTPFDM AAFDYRDDWQ TGAMEGMGKQ QQQQQQQQDV SIWF
101: LKYMLKMMEV CKAQGFVYGI IPEKGKPVTG ASDNLREWWK DKVRFDRNGP AAIAKYQSEN NISGGSNDCN SLVGPTPHTL QELQDTTLGS LLSALMQHCD
201: PPQRRFPLEK GVSPPWWPNG NEEWWPQLGL PNEQGPPPYK KPHDLKKAWK VGVLTAVIKH MSPDIAKIRK LVRQSKCLQD KMTAKESATW LAIINQEEVV
301: ARELYPESCP PLSSSSSLGS GSLLINDCSE YDVEGFEKEQ HGFDVEERKP EIVMMHPLAS FGVAKMQHFP IKEEVATTVN LEFTRKRKQN NDMNVMVMDR
401: SAGYTCENGQ CPHSKMNLGF QDRSSRDNHQ MVCPYRDNRL AYGASKFHMG GMKLVVPQQP VQPIDLSGVG VPENGQKMIT ELMAMYDRNV QSNQTPPTLM
501: ENQSMVIDAK AAQNQQLNFN SGNQMFMQQG TNNGVNNRFQ MVFDSTPFDM AAFDYRDDWQ TGAMEGMGKQ QQQQQQQQDV SIWF
Arabidopsis Description
EIL1ETHYLENE INSENSITIVE 3-like 1 protein [Source:UniProtKB/Swiss-Prot;Acc:Q9SLH0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.