Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX82228 | Canola | nucleus | 91.62 | 92.98 |
| Bra001802.1-P | Field mustard | nucleus | 94.72 | 89.5 |
| AT3G20770.1 | Thale cress | nucleus | 87.8 | 76.75 |
| CDY27563 | Canola | nucleus | 81.24 | 75.98 |
| CDY19606 | Canola | nucleus | 63.21 | 75.43 |
| CDY60391 | Canola | nucleus | 58.11 | 75.06 |
| CDY06379 | Canola | nucleus | 64.66 | 72.9 |
| CDY38540 | Canola | nucleus | 70.31 | 68.56 |
| CDX83250 | Canola | nucleus | 70.49 | 67.89 |
| KRG89856 | Soybean | nucleus | 66.48 | 58.49 |
| KRH14682 | Soybean | nucleus | 64.66 | 58.2 |
| KRH18695 | Soybean | nucleus | 65.76 | 58.13 |
| KRH73465 | Soybean | nucleus | 64.66 | 57.82 |
| KRH18696 | Soybean | nucleus | 63.93 | 56.8 |
| PGSC0003DMT400022477 | Potato | nucleus | 63.39 | 56.68 |
| Solyc01g009170.2.1 | Tomato | nucleus | 63.02 | 56.35 |
| Solyc06g073720.1.1 | Tomato | nucleus | 62.3 | 56.07 |
| VIT_06s0009g01380.t01 | Wine grape | nucleus | 61.38 | 55.25 |
| PGSC0003DMT400015148 | Potato | nucleus | 61.2 | 55.08 |
| Solyc06g073730.1.1 | Tomato | nucleus | 60.66 | 55.04 |
| PGSC0003DMT400015145 | Potato | nucleus | 59.2 | 54.26 |
| GSMUA_Achr6P15930_001 | Banana | nucleus | 49.91 | 52.9 |
| GSMUA_Achr10P... | Banana | nucleus | 49.36 | 51.92 |
| GSMUA_Achr3P09440_001 | Banana | nucleus | 46.08 | 47.83 |
| TraesCS4A01G129400.1 | Wheat | nucleus | 47.18 | 47.35 |
| GSMUA_Achr2P11540_001 | Banana | nucleus | 51.0 | 46.36 |
| GSMUA_Achr5P27670_001 | Banana | nucleus | 51.18 | 44.82 |
| CDY70411 | Canola | nucleus | 13.66 | 44.64 |
| EER94933 | Sorghum | nucleus | 51.91 | 44.32 |
| Zm00001d028974_P001 | Maize | nucleus | 52.09 | 44.2 |
| GSMUA_Achr11P... | Banana | nucleus | 47.54 | 44.09 |
| Zm00001d047563_P001 | Maize | nucleus | 51.55 | 44.08 |
| GSMUA_Achr8P21550_001 | Banana | nucleus | 50.82 | 44.01 |
| CDX81161 | Canola | nucleus | 15.3 | 43.75 |
| GSMUA_Achr9P17080_001 | Banana | nucleus | 49.54 | 43.73 |
| TraesCS4B01G175100.1 | Wheat | nucleus | 51.0 | 43.08 |
| Zm00001d022530_P001 | Maize | nucleus | 35.52 | 42.95 |
| TraesCS4D01G177000.1 | Wheat | nucleus | 50.82 | 42.86 |
| HORVU4Hr1G051680.1 | Barley | nucleus | 50.64 | 42.7 |
| Zm00001d007188_P001 | Maize | nucleus | 46.27 | 42.69 |
| CDY46568 | Canola | nucleus | 12.75 | 41.67 |
| OQU90496 | Sorghum | nucleus | 44.81 | 41.41 |
| TraesCS2A01G099900.1 | Wheat | nucleus | 45.54 | 40.45 |
| TraesCS2D01G099400.1 | Wheat | nucleus | 45.54 | 40.32 |
| TraesCS2B01G116900.1 | Wheat | nucleus | 44.63 | 39.58 |
| CDX92408 | Canola | nucleus | 35.34 | 38.88 |
| CDY59518 | Canola | nucleus | 35.88 | 38.7 |
| Os02t0689132-00 | Rice | nucleus | 12.39 | 38.42 |
| CDY40078 | Canola | nucleus | 31.69 | 38.41 |
| CDX85778 | Canola | nucleus | 31.69 | 38.24 |
| CDY47740 | Canola | nucleus | 37.7 | 35.57 |
| CDY60137 | Canola | nucleus | 37.52 | 35.09 |
| CDX73009 | Canola | nucleus | 37.34 | 35.04 |
| CDY11093 | Canola | nucleus | 35.88 | 34.87 |
| CDY09099 | Canola | nucleus | 22.22 | 31.44 |
| CDX78369 | Canola | nucleus | 17.49 | 29.18 |
| CDY08821 | Canola | nucleus | 16.39 | 25.35 |
| CDY14539 | Canola | nucleus | 16.21 | 23.92 |
Protein Annotations
| Gene3D:1.10.3180.10 | MapMan:11.5.2.4 | MapMan:15.5.11 | GO:A0A078H108 | UniProt:A0A078H108 | EnsemblPlants:CDY32390 |
| ProteinID:CDY32390 | ProteinID:CDY32390.1 | ncoils:Coil | InterPro:Ethylene_insens-like_DNA-bd | GO:GO:0003674 | GO:GO:0003700 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00051968001 | InterPro:IPR023278 |
| PFAM:PF04873 | PANTHER:PTHR33305 | PANTHER:PTHR33305:SF1 | SUPFAM:SSF116768 | UniParc:UPI0004EEAE26 | SEG:seg |
Description
BnaC03g41740DBnaC03g41740D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H108]
Coordinates
chrLK032294:-:62535..64988
Molecular Weight (calculated)
62095.7 Da
IEP (calculated)
5.573
GRAVY (calculated)
-0.689
Length
549 amino acids
Sequence
(BLAST)
(BLAST)
001: MMFNEMGMCG NMDFFGELDF CPPPPQPEPV TEEDYTDEEI DVDELERRMW RDKMRLKRLK EQKDKSREGA VDAAKQRQSS QEQARRKKMS RAQDGILKYM
101: LKMMEVCKAQ GFVYGIIPEN GKPVTGASDN LREWWKDKVR FDRNGPAAIS KYQAENSVQG VCEGGSSLIG PTPHSLQELQ DTTLGSLLSA LMQHCDPPQR
201: RFPLEKGVPP PWWPNGEEEW WCQLGLPKGQ GPAPYKKPHD LKKAWKVGVL TAVIKHMFPD VAKIRKLVRQ SKCLQDKMTA KESATWLSIV NQEESLAREL
301: YPESCPPSLS GGSCSLLMND CSQYDVEGVE KESLYKVEEL KPVKEEVPTE FIRKRKPSRD LNTIMVDRAA FTCENPGCVH SDISRGFLDR SSRDNHQLVC
401: PHRDTCPVVG YSQPRQPVNS VAQPIDLTGI GVPEDGQKMI SELMSMYDRN VHSSQTSMVM ENQSVSLLQP TVQNHQEHLQ ANNSNQTFFQ GNNFEAALNN
501: SSSNGFQVVY DAPPFDMASF DYRGDMSMVG VVGTMDGMQQ KQQDVSTWF
101: LKMMEVCKAQ GFVYGIIPEN GKPVTGASDN LREWWKDKVR FDRNGPAAIS KYQAENSVQG VCEGGSSLIG PTPHSLQELQ DTTLGSLLSA LMQHCDPPQR
201: RFPLEKGVPP PWWPNGEEEW WCQLGLPKGQ GPAPYKKPHD LKKAWKVGVL TAVIKHMFPD VAKIRKLVRQ SKCLQDKMTA KESATWLSIV NQEESLAREL
301: YPESCPPSLS GGSCSLLMND CSQYDVEGVE KESLYKVEEL KPVKEEVPTE FIRKRKPSRD LNTIMVDRAA FTCENPGCVH SDISRGFLDR SSRDNHQLVC
401: PHRDTCPVVG YSQPRQPVNS VAQPIDLTGI GVPEDGQKMI SELMSMYDRN VHSSQTSMVM ENQSVSLLQP TVQNHQEHLQ ANNSNQTFFQ GNNFEAALNN
501: SSSNGFQVVY DAPPFDMASF DYRGDMSMVG VVGTMDGMQQ KQQDVSTWF
001: MMFNEMGMCG NMDFFSSGSL GEVDFCPVPQ AEPDSIVEDD YTDDEIDVDE LERRMWRDKM RLKRLKEQDK GKEGVDAAKQ RQSQEQARRK KMSRAQDGIL
101: KYMLKMMEVC KAQGFVYGII PENGKPVTGA SDNLREWWKD KVRFDRNGPA AITKYQAENN IPGIHEGNNP IGPTPHTLQE LQDTTLGSLL SALMQHCDPP
201: QRRFPLEKGV PPPWWPNGKE DWWPQLGLPK DQGPAPYKKP HDLKKAWKVG VLTAVIKHMF PDIAKIRKLV RQSKCLQDKM TAKESATWLA IINQEESLAR
301: ELYPESCPPL SLSGGSCSLL MNDCSQYDVE GFEKESHYEV EELKPEKVMN SSNFGMVAKM HDFPVKEEVP AGNSEFMRKR KPNRDLNTIM DRTVFTCENL
401: GCAHSEISRG FLDRNSRDNH QLACPHRDSR LPYGAAPSRF HVNEVKPVVG FPQPRPVNSV AQPIDLTGIV PEDGQKMISE LMSMYDRNVQ SNQTSMVMEN
501: QSVSLLQPTV HNHQEHLQFP GNMVEGSFFE DLNIPNRANN NNSSNNQTFF QGNNNNNNVF KFDTADHNNF EAAHNNNNNS SGNRFQLVFD STPFDMASFD
601: YRDDMSMPGV VGTMDGMQQK QQDVSIWF
101: KYMLKMMEVC KAQGFVYGII PENGKPVTGA SDNLREWWKD KVRFDRNGPA AITKYQAENN IPGIHEGNNP IGPTPHTLQE LQDTTLGSLL SALMQHCDPP
201: QRRFPLEKGV PPPWWPNGKE DWWPQLGLPK DQGPAPYKKP HDLKKAWKVG VLTAVIKHMF PDIAKIRKLV RQSKCLQDKM TAKESATWLA IINQEESLAR
301: ELYPESCPPL SLSGGSCSLL MNDCSQYDVE GFEKESHYEV EELKPEKVMN SSNFGMVAKM HDFPVKEEVP AGNSEFMRKR KPNRDLNTIM DRTVFTCENL
401: GCAHSEISRG FLDRNSRDNH QLACPHRDSR LPYGAAPSRF HVNEVKPVVG FPQPRPVNSV AQPIDLTGIV PEDGQKMISE LMSMYDRNVQ SNQTSMVMEN
501: QSVSLLQPTV HNHQEHLQFP GNMVEGSFFE DLNIPNRANN NNSSNNQTFF QGNNNNNNVF KFDTADHNNF EAAHNNNNNS SGNRFQLVFD STPFDMASFD
601: YRDDMSMPGV VGTMDGMQQK QQDVSIWF
Arabidopsis Description
EIN3Protein ETHYLENE INSENSITIVE 3 [Source:UniProtKB/Swiss-Prot;Acc:O24606]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.