Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Bra024354.1-P | Field mustard | nucleus | 90.32 | 94.65 |
CDY08821 | Canola | nucleus | 89.52 | 93.8 |
CDX81161 | Canola | nucleus | 32.8 | 63.54 |
AT5G65100.1 | Thale cress | nucleus | 77.42 | 51.71 |
CDX78369 | Canola | nucleus | 45.16 | 51.06 |
CDX85778 | Canola | nucleus | 55.38 | 45.27 |
CDY40078 | Canola | nucleus | 55.11 | 45.25 |
PGSC0003DMT400043160 | Potato | nucleus | 25.0 | 33.45 |
KRH43217 | Soybean | nucleus | 35.22 | 28.92 |
CDY70411 | Canola | nucleus | 12.63 | 27.98 |
KRH59382 | Soybean | nucleus | 33.87 | 27.27 |
KRG97597 | Soybean | nucleus | 33.6 | 26.94 |
CDY46568 | Canola | nucleus | 11.83 | 26.19 |
VIT_00s0357g00120.t01 | Wine grape | nucleus | 33.6 | 25.83 |
KRH31276 | Soybean | nucleus | 27.42 | 25.63 |
PGSC0003DMT400053147 | Potato | nucleus | 29.57 | 24.34 |
Solyc04g054840.1.1 | Tomato | nucleus | 32.26 | 23.86 |
Solyc03g096630.1.1 | Tomato | nucleus | 27.69 | 23.73 |
CDY60391 | Canola | nucleus | 25.0 | 21.88 |
CDY09099 | Canola | nucleus | 22.31 | 21.39 |
CDY19606 | Canola | nucleus | 25.0 | 20.22 |
CDY06379 | Canola | nucleus | 25.0 | 19.1 |
GSMUA_Achr10P... | Banana | nucleus | 17.2 | 18.99 |
Os04t0456900-00 | Rice | nucleus | 16.67 | 18.29 |
TraesCS2D01G320800.1 | Wheat | nucleus | 22.04 | 17.63 |
CDY38540 | Canola | nucleus | 26.61 | 17.58 |
TraesCS2A01G342500.1 | Wheat | nucleus | 21.77 | 17.38 |
CDX83250 | Canola | nucleus | 26.61 | 17.37 |
TraesCS2B01G340200.1 | Wheat | nucleus | 21.24 | 16.95 |
CDX82228 | Canola | nucleus | 24.46 | 16.82 |
HORVU2Hr1G079900.1 | Barley | nucleus | 21.24 | 16.81 |
Zm00001d050861_P001 | Maize | nucleus | 19.89 | 16.78 |
CDX92408 | Canola | nucleus | 22.31 | 16.63 |
TraesCS3D01G390000.1 | Wheat | nucleus | 20.16 | 16.38 |
CDY59518 | Canola | nucleus | 22.31 | 16.31 |
CDY32390 | Canola | nucleus | 23.92 | 16.21 |
TraesCS3A01G396000.1 | Wheat | nucleus | 19.62 | 16.15 |
TraesCS3B01G428000.1 | Wheat | nucleus | 18.82 | 16.02 |
Zm00001d016924_P001 | Maize | nucleus | 18.28 | 15.85 |
CDY27563 | Canola | nucleus | 25.0 | 15.84 |
HORVU3Hr1G089250.3 | Barley | nucleus | 19.62 | 15.8 |
KXG26452 | Sorghum | nucleus | 19.62 | 15.53 |
TraesCS6B01G376700.1 | Wheat | nucleus | 19.09 | 15.5 |
TraesCS6D01G326600.1 | Wheat | nucleus | 19.09 | 15.5 |
EES05301 | Sorghum | nucleus | 19.62 | 15.27 |
TraesCSU01G080900.1 | Wheat | nucleus | 18.55 | 15.27 |
Zm00001d003451_P001 | Maize | nucleus | 21.24 | 14.85 |
CDY11093 | Canola | nucleus | 22.31 | 14.69 |
CDY47740 | Canola | nucleus | 21.24 | 13.57 |
CDX73009 | Canola | nucleus | 21.24 | 13.5 |
CDY60137 | Canola | nucleus | 20.97 | 13.29 |
Protein Annotations
MapMan:11.5.2.4 | MapMan:15.5.11 | UniProt:A0A078FNT7 | EnsemblPlants:CDY14539 | ProteinID:CDY14539 | ProteinID:CDY14539.1 |
GO:GO:0003674 | GO:GO:0003700 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
EnsemblPlantsGene:GSBRNA2T00079262001 | PFAM:PF04873 | PANTHER:PTHR33305 | PANTHER:PTHR33305:SF1 | UniParc:UPI0004EECBFC | SEG:seg |
Description
BnaC03g49200DBnaC03g49200D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FNT7]
Coordinates
chrLK032044:-:295722..297182
Molecular Weight (calculated)
42290.6 Da
IEP (calculated)
4.254
GRAVY (calculated)
-0.851
Length
372 amino acids
Sequence
(BLAST)
(BLAST)
001: MVEVQDMEPL SPIQDDDDCD DEEDELDRVN EDISYDDLKK RMWKDRNLMC KLKQQKKDDH DLSYPSSSTS SSSSSPSSSA IVRRAEASRR KKMARSQDSV
101: LKYMMKIMEV CKARGFVYGI VPEKGKPVTG SSDSLRRWWK ENVQFDQTAP TAVADYLTLA AAQLISSSDE RFSGRDQTHV AQLGETLLKR LKISDDDDVD
201: EEDQEPARII ALDQEQMGNK RKGKFVEEEG AMLSNVYTCQ NSSCPSSDVS LRFVDKNLRT GHEMECLYGT QEPIYQSSVS SDGLVRSITT SDDDYSASSK
301: GKDTIDYLNQ DGNWLDYLWF ERLHDFSCSD QATAVDLNQL PDHSDSNPTV NEEEFSLWDM GCEDRDIYMS QD
101: LKYMMKIMEV CKARGFVYGI VPEKGKPVTG SSDSLRRWWK ENVQFDQTAP TAVADYLTLA AAQLISSSDE RFSGRDQTHV AQLGETLLKR LKISDDDDVD
201: EEDQEPARII ALDQEQMGNK RKGKFVEEEG AMLSNVYTCQ NSSCPSSDVS LRFVDKNLRT GHEMECLYGT QEPIYQSSVS SDGLVRSITT SDDDYSASSK
301: GKDTIDYLNQ DGNWLDYLWF ERLHDFSCSD QATAVDLNQL PDHSDSNPTV NEEEFSLWDM GCEDRDIYMS QD
001: MVEVEELEPL SPMDDEEEEI SYDDLKRRMW KDRNLMEKKL KQQKRHSNDV VSFTTHRAEA SRRKKMARSQ DSVLKYMMKI MEVCKAKGFV YGIVPEKGKP
101: ITGSSDSLRR WWKENVQFDQ NAPDAITDYL ALAAAAAAAE LIDKSSSSSS LLHMLQELQD TTLGSLLSAL MQHCMPPQRR FPLEKGIAPP WWPTGTELWW
201: GEQGAAHEHG APPYRKPHDL RKSWKVSVLA AVIKHMSPNL GRVRRLARQS KSLQDKMMAK ETDTWSRVLN QEEALLNIKD LKISEDQDDQ ESSGSKRKSE
301: SMEPSKSVYT CQNSSCPKSD VSFGFGDKNS RTGHEIQCLY GSNQEPSQSG EYTSSLLETV PSIVTNSTSE DDYYNVSSRA LDKRDDDDHS INGNWMEYFW
401: LEKMQQEFHC SRRFEDDEGT GTDFDQLTES DRSDNVNLNQ LTKSDRSDNV NRSAFSVWDM GCEDKDIYMF D
101: ITGSSDSLRR WWKENVQFDQ NAPDAITDYL ALAAAAAAAE LIDKSSSSSS LLHMLQELQD TTLGSLLSAL MQHCMPPQRR FPLEKGIAPP WWPTGTELWW
201: GEQGAAHEHG APPYRKPHDL RKSWKVSVLA AVIKHMSPNL GRVRRLARQS KSLQDKMMAK ETDTWSRVLN QEEALLNIKD LKISEDQDDQ ESSGSKRKSE
301: SMEPSKSVYT CQNSSCPKSD VSFGFGDKNS RTGHEIQCLY GSNQEPSQSG EYTSSLLETV PSIVTNSTSE DDYYNVSSRA LDKRDDDDHS INGNWMEYFW
401: LEKMQQEFHC SRRFEDDEGT GTDFDQLTES DRSDNVNLNQ LTKSDRSDNV NRSAFSVWDM GCEDKDIYMF D
Arabidopsis Description
EIL4Putative ETHYLENE INSENSITIVE 3-like 4 protein [Source:UniProtKB/Swiss-Prot;Acc:Q9LX16]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.