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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra024354.1-P Field mustard nucleus 90.32 94.65
CDY08821 Canola nucleus 89.52 93.8
CDX81161 Canola nucleus 32.8 63.54
AT5G65100.1 Thale cress nucleus 77.42 51.71
CDX78369 Canola nucleus 45.16 51.06
CDX85778 Canola nucleus 55.38 45.27
CDY40078 Canola nucleus 55.11 45.25
PGSC0003DMT400043160 Potato nucleus 25.0 33.45
KRH43217 Soybean nucleus 35.22 28.92
CDY70411 Canola nucleus 12.63 27.98
KRH59382 Soybean nucleus 33.87 27.27
KRG97597 Soybean nucleus 33.6 26.94
CDY46568 Canola nucleus 11.83 26.19
VIT_00s0357g00120.t01 Wine grape nucleus 33.6 25.83
KRH31276 Soybean nucleus 27.42 25.63
PGSC0003DMT400053147 Potato nucleus 29.57 24.34
Solyc04g054840.1.1 Tomato nucleus 32.26 23.86
Solyc03g096630.1.1 Tomato nucleus 27.69 23.73
CDY60391 Canola nucleus 25.0 21.88
CDY09099 Canola nucleus 22.31 21.39
CDY19606 Canola nucleus 25.0 20.22
CDY06379 Canola nucleus 25.0 19.1
GSMUA_Achr10P... Banana nucleus 17.2 18.99
Os04t0456900-00 Rice nucleus 16.67 18.29
TraesCS2D01G320800.1 Wheat nucleus 22.04 17.63
CDY38540 Canola nucleus 26.61 17.58
TraesCS2A01G342500.1 Wheat nucleus 21.77 17.38
CDX83250 Canola nucleus 26.61 17.37
TraesCS2B01G340200.1 Wheat nucleus 21.24 16.95
CDX82228 Canola nucleus 24.46 16.82
HORVU2Hr1G079900.1 Barley nucleus 21.24 16.81
Zm00001d050861_P001 Maize nucleus 19.89 16.78
CDX92408 Canola nucleus 22.31 16.63
TraesCS3D01G390000.1 Wheat nucleus 20.16 16.38
CDY59518 Canola nucleus 22.31 16.31
CDY32390 Canola nucleus 23.92 16.21
TraesCS3A01G396000.1 Wheat nucleus 19.62 16.15
TraesCS3B01G428000.1 Wheat nucleus 18.82 16.02
Zm00001d016924_P001 Maize nucleus 18.28 15.85
CDY27563 Canola nucleus 25.0 15.84
HORVU3Hr1G089250.3 Barley nucleus 19.62 15.8
KXG26452 Sorghum nucleus 19.62 15.53
TraesCS6B01G376700.1 Wheat nucleus 19.09 15.5
TraesCS6D01G326600.1 Wheat nucleus 19.09 15.5
EES05301 Sorghum nucleus 19.62 15.27
TraesCSU01G080900.1 Wheat nucleus 18.55 15.27
Zm00001d003451_P001 Maize nucleus 21.24 14.85
CDY11093 Canola nucleus 22.31 14.69
CDY47740 Canola nucleus 21.24 13.57
CDX73009 Canola nucleus 21.24 13.5
CDY60137 Canola nucleus 20.97 13.29
Protein Annotations
MapMan:11.5.2.4MapMan:15.5.11UniProt:A0A078FNT7EnsemblPlants:CDY14539ProteinID:CDY14539ProteinID:CDY14539.1
GO:GO:0003674GO:GO:0003700GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634
GO:GO:0006139GO:GO:0006355GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987
EnsemblPlantsGene:GSBRNA2T00079262001PFAM:PF04873PANTHER:PTHR33305PANTHER:PTHR33305:SF1UniParc:UPI0004EECBFCSEG:seg
Description
BnaC03g49200DBnaC03g49200D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FNT7]
Coordinates
chrLK032044:-:295722..297182
Molecular Weight (calculated)
42290.6 Da
IEP (calculated)
4.254
GRAVY (calculated)
-0.851
Length
372 amino acids
Sequence
(BLAST)
001: MVEVQDMEPL SPIQDDDDCD DEEDELDRVN EDISYDDLKK RMWKDRNLMC KLKQQKKDDH DLSYPSSSTS SSSSSPSSSA IVRRAEASRR KKMARSQDSV
101: LKYMMKIMEV CKARGFVYGI VPEKGKPVTG SSDSLRRWWK ENVQFDQTAP TAVADYLTLA AAQLISSSDE RFSGRDQTHV AQLGETLLKR LKISDDDDVD
201: EEDQEPARII ALDQEQMGNK RKGKFVEEEG AMLSNVYTCQ NSSCPSSDVS LRFVDKNLRT GHEMECLYGT QEPIYQSSVS SDGLVRSITT SDDDYSASSK
301: GKDTIDYLNQ DGNWLDYLWF ERLHDFSCSD QATAVDLNQL PDHSDSNPTV NEEEFSLWDM GCEDRDIYMS QD
Best Arabidopsis Sequence Match ( AT5G10120.1 )
(BLAST)
001: MVEVEELEPL SPMDDEEEEI SYDDLKRRMW KDRNLMEKKL KQQKRHSNDV VSFTTHRAEA SRRKKMARSQ DSVLKYMMKI MEVCKAKGFV YGIVPEKGKP
101: ITGSSDSLRR WWKENVQFDQ NAPDAITDYL ALAAAAAAAE LIDKSSSSSS LLHMLQELQD TTLGSLLSAL MQHCMPPQRR FPLEKGIAPP WWPTGTELWW
201: GEQGAAHEHG APPYRKPHDL RKSWKVSVLA AVIKHMSPNL GRVRRLARQS KSLQDKMMAK ETDTWSRVLN QEEALLNIKD LKISEDQDDQ ESSGSKRKSE
301: SMEPSKSVYT CQNSSCPKSD VSFGFGDKNS RTGHEIQCLY GSNQEPSQSG EYTSSLLETV PSIVTNSTSE DDYYNVSSRA LDKRDDDDHS INGNWMEYFW
401: LEKMQQEFHC SRRFEDDEGT GTDFDQLTES DRSDNVNLNQ LTKSDRSDNV NRSAFSVWDM GCEDKDIYMF D
Arabidopsis Description
EIL4Putative ETHYLENE INSENSITIVE 3-like 4 protein [Source:UniProtKB/Swiss-Prot;Acc:Q9LX16]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.