Factsheet for TraesCSU01G080900.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G326600.1	Wheat	nucleus	92.48	91.27
TraesCS6B01G376700.1	Wheat	nucleus	88.94	87.77
Zm00001d016924_P001	Maize	nucleus	57.96	61.07
Zm00001d050861_P001	Maize	nucleus	57.3	58.73
EES05301	Sorghum	nucleus	60.62	57.32
GSMUA_Achr10P...	Banana	nucleus	40.49	54.3
CDX81161	Canola	nucleus	16.59	39.06
KRH31276	Soybean	nucleus	32.96	37.44
Solyc03g096630.1.1	Tomato	nucleus	33.41	34.79
Bra028601.1-P	Field mustard	nucleus	33.85	33.63
CDX85778	Canola	nucleus	33.85	33.63
PGSC0003DMT400053147	Potato	nucleus	33.41	33.41
KRH43217	Soybean	nucleus	33.41	33.33
CDY40078	Canola	nucleus	33.19	33.11
KRG97597	Soybean	nucleus	33.63	32.76
AT5G10120.1	Thale cress	nucleus	34.07	32.7
KRH59382	Soybean	nucleus	32.96	32.25
VIT_00s0357g00120.t01	Wine grape	nucleus	34.51	32.23
Solyc04g054840.1.1	Tomato	nucleus	32.08	28.83
AT5G65100.1	Thale cress	nucleus	33.85	27.47
CDX78369	Canola	nucleus	18.36	25.23
Bra006050.1-P	Field mustard	nucleus	18.36	25.23
PGSC0003DMT400043160	Potato	nucleus	13.94	22.66
Bra024354.1-P	Field mustard	nucleus	15.04	19.15
CDY14539	Canola	nucleus	15.27	18.55
CDY08821	Canola	nucleus	14.38	18.31

Protein Annotations

EnsemblPlants:TraesCSU01G080900.1	EnsemblPlantsGene:TraesCSU01G080900	Gene3D:1.10.3180.10	GO:GO:0003674	GO:GO:0003700	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:Ethylene_insens-like_DNA-bd	InterPro:IPR023278	PANTHER:PTHR33305	PANTHER:PTHR33305:SF7
PFAM:PF04873	SEG:seg	SUPFAM:SSF116768	MapMan:11.5.2.4	MapMan:15.5.11	:

Description

No Description!

Coordinates

chrUn:-:74558164..74559522

Molecular Weight (calculated)

50038.2 Da

IEP (calculated)

6.449

GRAVY (calculated)

-0.719

Length

452 amino acids

Sequence
(BLAST)

001: MDQGTHSRWR SPFPGSPMER VDAHGGGLKA LEVDVEQQEE IIDFEAEPPG SSESVEISNL KKRMWKDQMR LMKLEGRAGA RSGAPARRQL EDQEEDGPEA
101: RCRRKAMLRA QDGVLWHMMK MMQSCNARGF VYGVIDEAGE PTSGSSDSLR GWWKDKVVFD RRGPKALITG SSAAAGSSSP LGLASYLHRL QGIQDNTLGS
201: VLSALLQHCE PPQRNFPLER GLAPPWWPTG KEPWWGTQGE TQAHQGAPPY RKPHDLKKAW KVSLLSAVIK HMSPRFDQMR RLVWQSKRLQ QRMSAKESDT
301: WSKVLRQEEA LSGRLKSSLR ITPLDDDYDD GEGLEDGPED VARGPHDKRK CEGVPSGSSG GKCRRRPRGG SRDLAAVVPG LEAGVLAEES QSPINELMEL
401: YYSCLQGGGA EEKHDVAMQG APGGVDDVAQ QFLMDVIGSC PEVDHVLRLM EE

Best Arabidopsis Sequence Match ( AT1G73730.2 )
(BLAST)

001: MENEPDDLAS DNVAEIDVSD EEIDADDLER RMWKDRVRLK RIKERQKAGS QGAQTKETPK KISDQAQRKK MSRAQDGILK YMLKLMEVCK VRGFVYGIIP
101: EKGKPVSGSS DNIRAWWKEK VKFDKNGPAA IAKYEEECLA FGKSDGNRNS QFVLQDLQDA TLGSLLSSLM QHCDPPQRKY PLEKGTPPPW WPTGNEEWWV
201: KLGLPKSQSP PYRKPHDLKK MWKVGVLTAV INHMLPDIAK IKRHVRQSKC LQDKMTAKES AIWLAVLNQE ESLIQQPSSD NGNSNVTETH RRGNNADRRK
301: PVVNSDSDYD VDGTEEASGS VSSKDSRRNQ IQKEQPTAIS HSVRDQDKAE KHRRRKRPRI RSGTVNRQEE EQPEAQQRNI LPDMNHVDAP LLEYNINGTH
401: QEDDVVDPNI ALGPEDNGLE LVVPEFNNNY TYLPLVNEQT MMPVDERPML YGPNPNQELQ FGSGYNFYNP SAVFVHNQED DILHTQIEMN TQAPPHNSGF
501: EEAPGGVLQP LGLLGNEDGV TGSELPQYQS GILSPLTDLD FDYGGFGDDF SWFGA

Arabidopsis Description

EIL3SLIM1 [Source:UniProtKB/TrEMBL;Acc:A0A178VZZ3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.