Factsheet for VIT_00s0357g00120.t01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH31276	Soybean	nucleus	46.49	56.53
CDX81161	Canola	nucleus	21.9	55.21
KRH59382	Soybean	nucleus	51.86	54.33
KRH43217	Soybean	nucleus	50.0	53.42
KRG97597	Soybean	nucleus	50.41	52.59
PGSC0003DMT400053147	Potato	nucleus	47.93	51.33
Solyc03g096630.1.1	Tomato	nucleus	44.42	49.54
Bra028601.1-P	Field mustard	nucleus	44.83	47.69
CDX85778	Canola	nucleus	44.83	47.69
CDY40078	Canola	nucleus	44.42	47.46
Solyc04g054840.1.1	Tomato	nucleus	48.97	47.12
GSMUA_Achr10P...	Banana	nucleus	32.64	46.88
AT5G10120.1	Thale cress	nucleus	44.63	45.86
AT5G65100.1	Thale cress	nucleus	47.11	40.93
Os04t0456900-00	Rice	nucleus	26.86	38.35
Bra006050.1-P	Field mustard	nucleus	25.83	37.99
CDX78369	Canola	nucleus	25.83	37.99
PGSC0003DMT400043160	Potato	nucleus	21.07	36.69
TraesCS3B01G428000.1	Wheat	nucleus	31.2	34.55
TraesCSU01G080900.1	Wheat	nucleus	32.23	34.51
CDY08821	Canola	nucleus	25.21	34.37
Bra024354.1-P	Field mustard	nucleus	25.21	34.37
TraesCS6B01G376700.1	Wheat	nucleus	32.44	34.28
TraesCS6D01G326600.1	Wheat	nucleus	32.23	34.06
Zm00001d016924_P001	Maize	nucleus	30.17	34.03
Zm00001d050861_P001	Maize	nucleus	30.99	34.01
TraesCS3A01G396000.1	Wheat	nucleus	31.61	33.85
CDY14539	Canola	nucleus	25.83	33.6
VIT_06s0009g01380.t01	Wine grape	nucleus	42.15	33.44
TraesCS3D01G390000.1	Wheat	nucleus	31.61	33.41
KXG26452	Sorghum	nucleus	32.44	33.4
EES05301	Sorghum	nucleus	32.44	32.85
TraesCS2B01G340200.1	Wheat	nucleus	31.61	32.83
TraesCS2D01G320800.1	Wheat	nucleus	31.41	32.69
HORVU3Hr1G089250.3	Barley	nucleus	31.2	32.68
TraesCS2A01G342500.1	Wheat	nucleus	31.41	32.62
VIT_13s0047g00250.t01	Wine grape	nucleus	40.7	31.98
HORVU2Hr1G079900.1	Barley	nucleus	30.99	31.91
Zm00001d003451_P001	Maize	nucleus	34.09	31.02
VIT_06s0004g01610.t01	Wine grape	nucleus	36.16	28.09

Protein Annotations

Gene3D:1.10.3180.10	EntrezGene:100245518	wikigene:100245518	MapMan:11.5.2.4	MapMan:15.5.11	ProteinID:CCB57276
ProteinID:CCB57276.1	ncoils:Coil	InterPro:Ethylene_insens-like_DNA-bd	UniProt:F6HRG8	EMBL:FN596015	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009719	GO:GO:0009873	GO:GO:0009987
GO:GO:0071281	InterPro:IPR023278	EntrezGene:LOC100245518	wikigene:LOC100245518	PFAM:PF04873	PANTHER:PTHR33305
PANTHER:PTHR33305:SF10	SUPFAM:SSF116768	UniParc:UPI0002109136	ArrayExpress:VIT_00s0357g00120	EnsemblPlantsGene:VIT_00s0357g00120	EnsemblPlants:VIT_00s0357g00120.t01
RefSeq:XP_002262659	RefSeq:XP_002262659.2	SEG:seg	:	:	:

Description

No Description!

Coordinates

chrUn:-:25350265..25351719

Molecular Weight (calculated)

56025.8 Da

IEP (calculated)

4.695

GRAVY (calculated)

-0.905

Length

484 amino acids

Sequence
(BLAST)

001: MAQTREEIGE AEGVEEEEEE EKEKLSYEEL KKRMWKDRLR MQKFKEKHGK EVSETLEKQE QSRRKKMCRA QDAILKYMVK IMEVCRGQGF VYGIVPEKGK
101: PVTGSSDSLR EWWKDKVRFD QNAPLAISEL LPLPEESEGV DLESCMHLLH DLQDATLGSL LSALMQHCAP PQRRYPLEKG LAPPWWPTGQ ELWWGDQGIA
201: QEQGPPPYRK PHDLKKAWKV SVLAAIIKHM SPNLDRMRRL VRQSKCLQDK MTAKETTTWS KVVNQEEYLN KLTEKCLKIS SSKEEEKEEQ SIFVPNEDSD
301: LHRCSEKRKS TFDREAAVNT LYACQNAECP QSQTEFGFVD RNLRTDHQSH CTYGIEEIKD REEINDEGSG STVSNLLPYD HELMDSQMTE LKSMDINEVE
401: WWSKEPNEVD QGNDMQVNEI GEVSGSKAAD STTCYWEEGK IEDLGLDAAF EIQRENMQIN ASLSEEALSH ENLFSIWNMR YEQS

Best Arabidopsis Sequence Match ( AT5G10120.1 )
(BLAST)

001: MVEVEELEPL SPMDDEEEEI SYDDLKRRMW KDRNLMEKKL KQQKRHSNDV VSFTTHRAEA SRRKKMARSQ DSVLKYMMKI MEVCKAKGFV YGIVPEKGKP
101: ITGSSDSLRR WWKENVQFDQ NAPDAITDYL ALAAAAAAAE LIDKSSSSSS LLHMLQELQD TTLGSLLSAL MQHCMPPQRR FPLEKGIAPP WWPTGTELWW
201: GEQGAAHEHG APPYRKPHDL RKSWKVSVLA AVIKHMSPNL GRVRRLARQS KSLQDKMMAK ETDTWSRVLN QEEALLNIKD LKISEDQDDQ ESSGSKRKSE
301: SMEPSKSVYT CQNSSCPKSD VSFGFGDKNS RTGHEIQCLY GSNQEPSQSG EYTSSLLETV PSIVTNSTSE DDYYNVSSRA LDKRDDDDHS INGNWMEYFW
401: LEKMQQEFHC SRRFEDDEGT GTDFDQLTES DRSDNVNLNQ LTKSDRSDNV NRSAFSVWDM GCEDKDIYMF D

Arabidopsis Description

EIL4Putative ETHYLENE INSENSITIVE 3-like 4 protein [Source:UniProtKB/Swiss-Prot;Acc:Q9LX16]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.