Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G340200.1 | Wheat | nucleus | 63.42 | 46.14 |
| KXG26452 | Sorghum | nucleus | 63.72 | 45.96 |
| TraesCS2D01G320800.1 | Wheat | nucleus | 62.54 | 45.59 |
| TraesCS2A01G342500.1 | Wheat | nucleus | 62.54 | 45.49 |
| HORVU2Hr1G079900.1 | Barley | nucleus | 62.54 | 45.11 |
| GSMUA_Achr10P... | Banana | nucleus | 41.89 | 42.14 |
| Zm00001d003451_P001 | Maize | nucleus | 64.9 | 41.35 |
| KRH31276 | Soybean | nucleus | 39.53 | 33.67 |
| CDX81161 | Canola | nucleus | 17.7 | 31.25 |
| KRH43217 | Soybean | nucleus | 39.53 | 29.58 |
| KRG97597 | Soybean | nucleus | 39.82 | 29.09 |
| Solyc03g096630.1.1 | Tomato | nucleus | 37.17 | 29.03 |
| PGSC0003DMT400053147 | Potato | nucleus | 37.76 | 28.32 |
| Bra028601.1-P | Field mustard | nucleus | 37.76 | 28.13 |
| CDX85778 | Canola | nucleus | 37.76 | 28.13 |
| KRH59382 | Soybean | nucleus | 38.05 | 27.92 |
| CDY40078 | Canola | nucleus | 37.17 | 27.81 |
| AT5G10120.1 | Thale cress | nucleus | 37.76 | 27.18 |
| VIT_00s0357g00120.t01 | Wine grape | nucleus | 38.35 | 26.86 |
| Solyc04g054840.1.1 | Tomato | nucleus | 36.28 | 24.45 |
| Os02t0689132-00 | Rice | nucleus | 12.68 | 24.29 |
| AT5G65100.1 | Thale cress | nucleus | 38.35 | 23.34 |
| Os07t0685700-01 | Rice | mitochondrion, nucleus | 38.05 | 21.75 |
| Os03t0324300-02 | Rice | nucleus | 38.94 | 20.59 |
| PGSC0003DMT400043160 | Potato | nucleus | 16.81 | 20.5 |
| Os03t0324200-01 | Rice | nucleus | 38.94 | 20.5 |
| Os09t0490200-01 | Rice | nucleus | 35.1 | 19.48 |
| Os08t0508700-01 | Rice | nucleus | 34.81 | 19.06 |
| CDX78369 | Canola | nucleus | 18.29 | 18.84 |
| Bra006050.1-P | Field mustard | nucleus | 18.29 | 18.84 |
| Bra024354.1-P | Field mustard | nucleus | 17.99 | 17.18 |
| CDY08821 | Canola | nucleus | 17.7 | 16.9 |
| CDY14539 | Canola | nucleus | 18.29 | 16.67 |
Protein Annotations
| Gene3D:1.10.3180.10 | MapMan:11.5.2.4 | MapMan:15.5.11 | UniProt:A0A0P0WB01 | ProteinID:BAS89509.1 | InterPro:Ethylene_insens-like_DNA-bd |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR023278 | EnsemblPlantsGene:Os04g0456900 | EnsemblPlants:Os04t0456900-00 |
| PFAM:PF04873 | PANTHER:PTHR33305 | PANTHER:PTHR33305:SF4 | SUPFAM:SSF116768 | UniParc:UPI0003939E92 | SEG:seg |
Description
Similar to H0523F07.9 protein. (Os04t0456900-00)
Coordinates
chr4:+:22834019..22835912
Molecular Weight (calculated)
37502.6 Da
IEP (calculated)
8.317
GRAVY (calculated)
-0.557
Length
339 amino acids
Sequence
(BLAST)
(BLAST)
001: MDDKGKAKAA DAAAAAEAAP EQEEFFSDSE SGSESIEIAD LKKRMWKDQM LLMKLEGRSG HEGALAAQDH RVVRREEEAA EEEPPEARYR RKAMLRAQDG
101: VLRHMLKMME ACNARGFVYG IVDESGVPVS GSSDSLRGWW KDDVAFDRAG PTALSGRGGR GSPRSPAAAA SFLHGLLDIQ DSTLGSLLSA LIQHCEPPQR
201: SFPLDRGLPP PWWPTGGEAW WGLQGEAQAS QGPPPYRKPH DLKKAWKISL LRASAVIKHL SPRESILQFL PYAPTYLCQS YYSTFLPSAQ WKKQNTMVIS
301: NLEERMRYFV AMRPLADAIS PCRQAAKQSA HDKGMARTP
101: VLRHMLKMME ACNARGFVYG IVDESGVPVS GSSDSLRGWW KDDVAFDRAG PTALSGRGGR GSPRSPAAAA SFLHGLLDIQ DSTLGSLLSA LIQHCEPPQR
201: SFPLDRGLPP PWWPTGGEAW WGLQGEAQAS QGPPPYRKPH DLKKAWKISL LRASAVIKHL SPRESILQFL PYAPTYLCQS YYSTFLPSAQ WKKQNTMVIS
301: NLEERMRYFV AMRPLADAIS PCRQAAKQSA HDKGMARTP
001: MENEPDDLAS DNVAEIDVSD EEIDADDLER RMWKDRVRLK RIKERQKAGS QGAQTKETPK KISDQAQRKK MSRAQDGILK YMLKLMEVCK VRGFVYGIIP
101: EKGKPVSGSS DNIRAWWKEK VKFDKNGPAA IAKYEEECLA FGKSDGNRNS QFVLQDLQDA TLGSLLSSLM QHCDPPQRKY PLEKGTPPPW WPTGNEEWWV
201: KLGLPKSQSP PYRKPHDLKK MWKVGVLTAV INHMLPDIAK IKRHVRQSKC LQDKMTAKES AIWLAVLNQE ESLIQQPSSD NGNSNVTETH RRGNNADRRK
301: PVVNSDSDYD VDGTEEASGS VSSKDSRRNQ IQKEQPTAIS HSVRDQDKAE KHRRRKRPRI RSGTVNRQEE EQPEAQQRNI LPDMNHVDAP LLEYNINGTH
401: QEDDVVDPNI ALGPEDNGLE LVVPEFNNNY TYLPLVNEQT MMPVDERPML YGPNPNQELQ FGSGYNFYNP SAVFVHNQED DILHTQIEMN TQAPPHNSGF
501: EEAPGGVLQP LGLLGNEDGV TGSELPQYQS GILSPLTDLD FDYGGFGDDF SWFGA
101: EKGKPVSGSS DNIRAWWKEK VKFDKNGPAA IAKYEEECLA FGKSDGNRNS QFVLQDLQDA TLGSLLSSLM QHCDPPQRKY PLEKGTPPPW WPTGNEEWWV
201: KLGLPKSQSP PYRKPHDLKK MWKVGVLTAV INHMLPDIAK IKRHVRQSKC LQDKMTAKES AIWLAVLNQE ESLIQQPSSD NGNSNVTETH RRGNNADRRK
301: PVVNSDSDYD VDGTEEASGS VSSKDSRRNQ IQKEQPTAIS HSVRDQDKAE KHRRRKRPRI RSGTVNRQEE EQPEAQQRNI LPDMNHVDAP LLEYNINGTH
401: QEDDVVDPNI ALGPEDNGLE LVVPEFNNNY TYLPLVNEQT MMPVDERPML YGPNPNQELQ FGSGYNFYNP SAVFVHNQED DILHTQIEMN TQAPPHNSGF
501: EEAPGGVLQP LGLLGNEDGV TGSELPQYQS GILSPLTDLD FDYGGFGDDF SWFGA
Arabidopsis Description
EIL3SLIM1 [Source:UniProtKB/TrEMBL;Acc:A0A178VZZ3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.