Factsheet for TraesCS2B01G340200.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G320800.1	Wheat	nucleus	94.85	95.05
TraesCS2A01G342500.1	Wheat	nucleus	93.99	93.99
HORVU2Hr1G079900.1	Barley	nucleus	92.7	91.91
Os04t0456900-00	Rice	nucleus	46.14	63.42
KXG26452	Sorghum	nucleus	59.23	58.72
Zm00001d003451_P001	Maize	nucleus	66.74	58.46
TraesCS3B01G428000.1	Wheat	nucleus	50.43	53.78
GSMUA_Achr10P...	Banana	nucleus	37.34	51.63
TraesCS6B01G376700.1	Wheat	nucleus	49.57	50.44
KRH31276	Soybean	nucleus	34.12	39.95
CDX81161	Canola	nucleus	16.09	39.06
Solyc03g096630.1.1	Tomato	nucleus	33.48	35.94
KRH43217	Soybean	nucleus	34.55	35.54
KRH59382	Soybean	nucleus	34.33	34.63
PGSC0003DMT400053147	Potato	nucleus	33.05	34.07
Bra028601.1-P	Field mustard	nucleus	33.05	33.85
CDX85778	Canola	nucleus	33.05	33.85
KRG97597	Soybean	nucleus	33.48	33.62
CDY40078	Canola	nucleus	32.62	33.55
AT5G10120.1	Thale cress	nucleus	32.4	32.06
VIT_00s0357g00120.t01	Wine grape	nucleus	32.83	31.61
Solyc04g054840.1.1	Tomato	nucleus	32.62	30.22
AT5G65100.1	Thale cress	nucleus	33.69	28.19
CDX78369	Canola	nucleus	18.67	26.44
Bra006050.1-P	Field mustard	nucleus	18.67	26.44
TraesCS2B01G116900.1	Wheat	nucleus	34.76	26.17
PGSC0003DMT400043160	Potato	nucleus	15.24	25.54
TraesCS4B01G175100.1	Wheat	nucleus	35.62	25.54
TraesCS7B01G145400.1	Wheat	nucleus	31.76	24.14
Bra024354.1-P	Field mustard	nucleus	16.95	22.25
TraesCS5B01G265400.1	Wheat	nucleus	27.68	22.16
CDY08821	Canola	nucleus	16.74	21.97
CDY14539	Canola	nucleus	16.95	21.24

Protein Annotations

EnsemblPlants:TraesCS2B01G340200.1	EnsemblPlantsGene:TraesCS2B01G340200	Gene3D:1.10.3180.10	GO:GO:0003674	GO:GO:0003700	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:Ethylene_insens-like_DNA-bd	InterPro:IPR023278	PANTHER:PTHR33305	PANTHER:PTHR33305:SF4
PFAM:PF04873	SEG:seg	SUPFAM:SSF116768	MapMan:11.5.2.4	MapMan:15.5.11	:

Description

No Description!

Coordinates

chr2B:-:485750011..485751411

Molecular Weight (calculated)

51521.4 Da

IEP (calculated)

4.921

GRAVY (calculated)

-0.722

Length

466 amino acids

Sequence
(BLAST)

001: MGSPSNDKPI PGLHQLPRPA MDRGKTKADP HAVAVAAEPD LQDESESESG SESIEIADLK KRMWKDQLLL MKLEGSPGHE RRATGQRPGT DLAQAEKEAE
101: MPESRYRRKA MLRAQDGVLR HMLRMMEACN ARGFVYGIVD ETGMPVSGSS DSLRGWWKED VGFERTGPTA LAGPSTALES PGSSFLHGLL DIQDSTLGSL
201: LSALIQHCEP PQRSFPLDRG LPPPWWPTGQ EVWWGLQGET QAHQGPPPYR KPHDLKKAWK ISLLSAVIKH LSPRFDQMRK LVWQSKRLQH RMSARDAETW
301: SRVITQEEAL DRQVQRALRI TPLEEQPGDD DDKEPREAGR DLHVDKRKRE VGNESTGGNV DSGRGRELVA LPGIDGVAEA DRNSIDELMK MYYSCLQGTD
401: GGEQEIKDVA AGGGEQSNTS SAETGVLDAA TVHDDMFDDF LSVADVVDMS DFPGSPIWHW GSSDLD

Best Arabidopsis Sequence Match ( AT1G73730.2 )
(BLAST)

001: MENEPDDLAS DNVAEIDVSD EEIDADDLER RMWKDRVRLK RIKERQKAGS QGAQTKETPK KISDQAQRKK MSRAQDGILK YMLKLMEVCK VRGFVYGIIP
101: EKGKPVSGSS DNIRAWWKEK VKFDKNGPAA IAKYEEECLA FGKSDGNRNS QFVLQDLQDA TLGSLLSSLM QHCDPPQRKY PLEKGTPPPW WPTGNEEWWV
201: KLGLPKSQSP PYRKPHDLKK MWKVGVLTAV INHMLPDIAK IKRHVRQSKC LQDKMTAKES AIWLAVLNQE ESLIQQPSSD NGNSNVTETH RRGNNADRRK
301: PVVNSDSDYD VDGTEEASGS VSSKDSRRNQ IQKEQPTAIS HSVRDQDKAE KHRRRKRPRI RSGTVNRQEE EQPEAQQRNI LPDMNHVDAP LLEYNINGTH
401: QEDDVVDPNI ALGPEDNGLE LVVPEFNNNY TYLPLVNEQT MMPVDERPML YGPNPNQELQ FGSGYNFYNP SAVFVHNQED DILHTQIEMN TQAPPHNSGF
501: EEAPGGVLQP LGLLGNEDGV TGSELPQYQS GILSPLTDLD FDYGGFGDDF SWFGA

Arabidopsis Description

EIL3SLIM1 [Source:UniProtKB/TrEMBL;Acc:A0A178VZZ3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.