Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G265700.1 | Wheat | nucleus | 96.39 | 96.23 |
| TraesCS5D01G273600.1 | Wheat | nucleus | 96.91 | 92.16 |
| HORVU5Hr1G073380.1 | Barley | nucleus | 92.96 | 88.83 |
| Os09t0490200-01 | Rice | nucleus | 76.98 | 73.32 |
| EER99089 | Sorghum | nucleus | 76.29 | 72.91 |
| Zm00001d020939_P001 | Maize | nucleus | 75.43 | 72.09 |
| TraesCS7B01G145400.1 | Wheat | nucleus | 59.79 | 56.77 |
| GSMUA_Achr9P27680_001 | Banana | nucleus | 51.72 | 49.34 |
| GSMUA_Achr8P25580_001 | Banana | nucleus | 51.55 | 48.7 |
| GSMUA_Achr3P11160_001 | Banana | nucleus | 47.59 | 48.51 |
| AT1G73730.1 | Thale cress | nucleus | 39.69 | 40.74 |
| CDX73009 | Canola | nucleus | 40.89 | 40.68 |
| Bra008110.1-P | Field mustard | nucleus | 37.63 | 40.63 |
| CDY60137 | Canola | nucleus | 40.72 | 40.37 |
| Bra015970.1-P | Field mustard | nucleus | 40.55 | 40.2 |
| Bra003831.1-P | Field mustard | nucleus | 37.63 | 39.67 |
| VIT_06s0004g01610.t01 | Wine grape | nucleus | 42.1 | 39.33 |
| CDY11093 | Canola | nucleus | 37.97 | 39.12 |
| KRH23176 | Soybean | nucleus | 39.52 | 38.92 |
| KRH10163 | Soybean | nucleus | 39.35 | 38.81 |
| CDY47740 | Canola | nucleus | 38.14 | 38.14 |
| Solyc01g006650.1.1 | Tomato | nucleus | 37.63 | 33.18 |
| PGSC0003DMT400055102 | Potato | nucleus | 37.8 | 32.93 |
| Solyc01g014480.2.1 | Tomato | nucleus | 38.14 | 32.89 |
| PGSC0003DMT400076890 | Potato | nucleus | 37.97 | 32.64 |
| TraesCS4B01G175100.1 | Wheat | nucleus | 33.51 | 30.0 |
| TraesCS3B01G428000.1 | Wheat | nucleus | 22.51 | 29.98 |
| TraesCS6B01G376700.1 | Wheat | nucleus | 22.34 | 28.38 |
| TraesCS2B01G340200.1 | Wheat | nucleus | 22.16 | 27.68 |
| TraesCS2B01G116900.1 | Wheat | nucleus | 29.21 | 27.46 |
Protein Annotations
| Gene3D:1.10.3180.10 | MapMan:11.5.2.4 | MapMan:15.5.11 | ncoils:Coil | InterPro:Ethylene_insens-like_DNA-bd | GO:GO:0003674 |
| GO:GO:0003700 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR023278 | PFAM:PF04873 |
| PANTHER:PTHR33305 | PANTHER:PTHR33305:SF2 | SUPFAM:SSF116768 | EnsemblPlantsGene:TraesCS5B01G265400 | EnsemblPlants:TraesCS5B01G265400.1 | SEG:seg |
Description
No Description!
Coordinates
chr5B:-:449750740..449752575
Molecular Weight (calculated)
64698.9 Da
IEP (calculated)
5.590
GRAVY (calculated)
-0.714
Length
582 amino acids
Sequence
(BLAST)
(BLAST)
001: MDQLALLATE FGDSSDFEVD GINENDVSDE EIEAEELARR MWKDRVRLRR IKERQQKLAL QQAELELEKS KPKQISDQAM RKKMARAHDG ILKYMLKLME
101: VCNARGFVYG IIPEKGKPVS GASDNIRAWW KEKVKFDKNG PAAIAKYEAE HLVDADAQSS VVKNEHSLMD LQDATLGSLL SSLMQHCNPP QRKYPLEKGT
201: PPPWWPAGNE EWWAALGLPR GQIAPYKKPH DLKKVWKDKM TAKESLIWLG VLQREERHVH GIDNGVSEIT HRSAPEDRNG TRNAHSSSNE YDVDGFEEAP
301: LSISSKDDEQ GLSPAAQSSE EHVSGRGTER ANTEHLYKAV TLKEGTKKQP PKRKRARHSS IAVEQEVQRT DDAPENPGNL IPDMNRLNQV EIPGMANQIT
401: SFNQMAVTSE ALQHRGNAQG HAYLPGAGVN SFDNAQAVDA TPISIYQPVL YGSSDNARSK SGNPFPLHAN SGYNSFPSNY QTLPPKQSVP LPMMDHHVVP
501: MGIRAPADNS PYGDHVIGGG SSTSVPGDMQ HLVDFPFYGE QDKFVGSSFE GLPLDYISMS SPIPDIDDLL LHDDDLMEYL GT
101: VCNARGFVYG IIPEKGKPVS GASDNIRAWW KEKVKFDKNG PAAIAKYEAE HLVDADAQSS VVKNEHSLMD LQDATLGSLL SSLMQHCNPP QRKYPLEKGT
201: PPPWWPAGNE EWWAALGLPR GQIAPYKKPH DLKKVWKDKM TAKESLIWLG VLQREERHVH GIDNGVSEIT HRSAPEDRNG TRNAHSSSNE YDVDGFEEAP
301: LSISSKDDEQ GLSPAAQSSE EHVSGRGTER ANTEHLYKAV TLKEGTKKQP PKRKRARHSS IAVEQEVQRT DDAPENPGNL IPDMNRLNQV EIPGMANQIT
401: SFNQMAVTSE ALQHRGNAQG HAYLPGAGVN SFDNAQAVDA TPISIYQPVL YGSSDNARSK SGNPFPLHAN SGYNSFPSNY QTLPPKQSVP LPMMDHHVVP
501: MGIRAPADNS PYGDHVIGGG SSTSVPGDMQ HLVDFPFYGE QDKFVGSSFE GLPLDYISMS SPIPDIDDLL LHDDDLMEYL GT
001: MGDLAMSVAD IRMENEPDDL ASDNVAEIDV SDEEIDADDL ERRMWKDRVR LKRIKERQKA GSQGAQTKET PKKISDQAQR KKMSRAQDGI LKYMLKLMEV
101: CKVRGFVYGI IPEKGKPVSG SSDNIRAWWK EKVKFDKNGP AAIAKYEEEC LAFGKSDGNR NSQFVLQDLQ DATLGSLLSS LMQHCDPPQR KYPLEKGTPP
201: PWWPTGNEEW WVKLGLPKSQ SPPYRKPHDL KKMWKVGVLT AVINHMLPDI AKIKRHVRQS KCLQDKMTAK ESAIWLAVLN QEESLIQQPS SDNGNSNVTE
301: THRRGNNADR RKPVVNSDSD YDVDGTEEAS GSVSSKDSRR NQIQKEQPTA ISHSVRDQDK AEKHRRRKRP RIRSGTVNRQ EEEQPEAQQR NILPDMNHVD
401: APLLEYNING THQEDDVVDP NIALGPEDNG LELVVPEFNN NYTYLPLVNE QTMMPVDERP MLYGPNPNQE LQFGSGYNFY NPSAVFVHNQ EDDILHTQIE
501: MNTQAPPHNS GFEEAPGGVL QPLGLLGNED GVTGSELPQY QSGILSPLTD LDFDYGGFGD DFSWFGA
101: CKVRGFVYGI IPEKGKPVSG SSDNIRAWWK EKVKFDKNGP AAIAKYEEEC LAFGKSDGNR NSQFVLQDLQ DATLGSLLSS LMQHCDPPQR KYPLEKGTPP
201: PWWPTGNEEW WVKLGLPKSQ SPPYRKPHDL KKMWKVGVLT AVINHMLPDI AKIKRHVRQS KCLQDKMTAK ESAIWLAVLN QEESLIQQPS SDNGNSNVTE
301: THRRGNNADR RKPVVNSDSD YDVDGTEEAS GSVSSKDSRR NQIQKEQPTA ISHSVRDQDK AEKHRRRKRP RIRSGTVNRQ EEEQPEAQQR NILPDMNHVD
401: APLLEYNING THQEDDVVDP NIALGPEDNG LELVVPEFNN NYTYLPLVNE QTMMPVDERP MLYGPNPNQE LQFGSGYNFY NPSAVFVHNQ EDDILHTQIE
501: MNTQAPPHNS GFEEAPGGVL QPLGLLGNED GVTGSELPQY QSGILSPLTD LDFDYGGFGD DFSWFGA
Arabidopsis Description
EIL3SLIM1 [Source:UniProtKB/TrEMBL;Acc:A0A178VZZ3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.