Factsheet for Bra008110.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra030812.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G73730.1	Bra030812.1-P	AT1G56160.1	18218967

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY47740	Canola	nucleus	99.44	92.1
AT1G73730.1	Thale cress	nucleus	83.12	79.01
Bra015970.1-P	Field mustard	nucleus	85.34	78.36
Bra003831.1-P	Field mustard	nucleus	77.18	75.36
HORVU0Hr1G011440.1	Barley	nucleus	45.83	63.82
VIT_06s0004g01610.t01	Wine grape	nucleus	56.77	49.12
KRH23176	Soybean	nucleus	53.43	48.73
KRH10163	Soybean	nucleus	53.06	48.47
PGSC0003DMT400076890	Potato	nucleus	52.13	41.51
Solyc01g014480.2.1	Tomato	nucleus	51.76	41.33
Solyc01g006650.1.1	Tomato	nucleus	49.35	40.3
PGSC0003DMT400055102	Potato	nucleus	49.54	39.97
GSMUA_Achr9P27680_001	Banana	nucleus	44.9	39.67
Os09t0490200-01	Rice	nucleus	44.71	39.44
TraesCS5D01G273600.1	Wheat	nucleus	44.71	39.38
GSMUA_Achr3P11160_001	Banana	nucleus	41.37	39.05
Zm00001d020939_P001	Maize	nucleus	43.78	38.75
GSMUA_Achr8P25580_001	Banana	nucleus	44.16	38.64
EER99089	Sorghum	nucleus	43.6	38.59
TraesCS5A01G265700.1	Wheat	nucleus	41.0	37.91
TraesCS5B01G265400.1	Wheat	nucleus	40.63	37.63
TraesCS7A01G246100.1	Wheat	nucleus	41.93	36.81
TraesCS7B01G145400.1	Wheat	nucleus	41.74	36.7
TraesCS7D01G244600.1	Wheat	nucleus	41.74	36.65
OQU80929	Sorghum	nucleus	41.56	36.25
Os08t0508700-01	Rice	nucleus	41.56	36.19
Bra001802.1-P	Field mustard	nucleus	38.96	36.14
Bra000528.1-P	Field mustard	nucleus	37.85	35.73
Zm00001d031445_P001	Maize	nucleus	41.19	35.13
Bra028601.1-P	Field mustard	nucleus	27.64	32.75
Bra014281.1-P	Field mustard	nucleus	10.02	32.14
Bra002358.1-P	Field mustard	nucleus	27.83	29.41
Bra006050.1-P	Field mustard	nucleus	16.14	26.44
Bra023927.1-P	Field mustard	nucleus	21.15	25.73
Bra035746.1-P	Field mustard	nucleus	21.52	23.67
Bra020146.1-P	Field mustard	nucleus	16.7	23.2
Bra024354.1-P	Field mustard	nucleus	13.73	20.85

Protein Annotations

Gene3D:1.10.3180.10	MapMan:11.5.2.4	MapMan:15.5.11	EnsemblPlantsGene:Bra008110	EnsemblPlants:Bra008110.1	EnsemblPlants:Bra008110.1-P
ncoils:Coil	InterPro:Ethylene_insens-like_DNA-bd	GO:GO:0003674	GO:GO:0003700	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:IPR023278	UniProt:M4CV64	PFAM:PF04873	PANTHER:PTHR33305
SUPFAM:SSF116768	UniParc:UPI000254577C	SEG:seg	:	:	:

Description

AT1G73730 (E=8e-171) EIL3, SLIM1 | EIL3 (ETHYLENE-INSENSITIVE3-LIKE3); DNA binding / transcription factor

Coordinates

chrA02:-:13184566..13186185

Molecular Weight (calculated)

60806.1 Da

IEP (calculated)

5.338

GRAVY (calculated)

-0.815

Length

539 amino acids

Sequence
(BLAST)

001: MENEPDDIAS DNVAEIDVSD EDIDAEDLER RMWKDRVRLK RIKERTKSGS QAKEAPKKIS DQAQRKKMSR AQDGILKYML KLMEVCKVRG FVYGIIPEKG
101: KPVSGSSDNI RAWWKEKVKF DKNGPAAIAK YEEECLAFGK SDRNRNSQFV LQDLQDATLG SLLSSLMQHC DPPQRKYPLE KGTPPPWWPT GDEEWWVKLG
201: LGKSQSPPYR KPHDLKKMWK VGVLTAVINH MLPDVAKIKR HVRQSKCLQD KMTAKESAIW LAVLNQEESL IQQNSSDNGT SNVTEIRRRG NNNAENMVNS
301: DGDYDVDGTE EASGSLTATS QPVRDQDKAK KQRRRKRPRS ISGTVSRQEE EQRNILPDMY HVDASLLGHN INGTHHHQEG VLEPNIALGA EENGLEVIVP
401: EFDNNYTYFP PVSEQAMMPV DERPMLYGPN PNQELQFGSG YNFYNPSAVL VNNQEQDLIH TRIEMNAPRS NGFEASVGVG APDGLHEDGV AGRDLPPQFQ
501: RDSNILSPFN DLAAFDSSTF YSGFDSYGAF DDDFSWFGA

Best Arabidopsis Sequence Match ( AT1G73730.1 )
(BLAST)

001: MGDLAMSVAD IRMENEPDDL ASDNVAEIDV SDEEIDADDL ERRMWKDRVR LKRIKERQKA GSQGAQTKET PKKISDQAQR KKMSRAQDGI LKYMLKLMEV
101: CKVRGFVYGI IPEKGKPVSG SSDNIRAWWK EKVKFDKNGP AAIAKYEEEC LAFGKSDGNR NSQFVLQDLQ DATLGSLLSS LMQHCDPPQR KYPLEKGTPP
201: PWWPTGNEEW WVKLGLPKSQ SPPYRKPHDL KKMWKVGVLT AVINHMLPDI AKIKRHVRQS KCLQDKMTAK ESAIWLAVLN QEESLIQQPS SDNGNSNVTE
301: THRRGNNADR RKPVVNSDSD YDVDGTEEAS GSVSSKDSRR NQIQKEQPTA ISHSVRDQDK AEKHRRRKRP RIRSGTVNRQ EEEQPEAQQR NILPDMNHVD
401: APLLEYNING THQEDDVVDP NIALGPEDNG LELVVPEFNN NYTYLPLVNE QTMMPVDERP MLYGPNPNQE LQFGSGYNFY NPSAVFVHNQ EDDILHTQIE
501: MNTQAPPHNS GFEEAPGGVL QPLGLLGNED GVTGSELPQY QSGILSPLTD LDFDYGGFGD DFSWFGA

Arabidopsis Description

EIL3SLIM1 [Source:UniProtKB/TrEMBL;Acc:A0A178VZZ3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.