Factsheet for TraesCS7D01G244600.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G145400.1	Wheat	nucleus	97.72	97.88
TraesCS7A01G246100.1	Wheat	nucleus	96.58	96.58
HORVU7Hr1G050560.1	Barley	nucleus	92.02	91.87
HORVU7Hr1G050590.1	Barley	nucleus	35.34	74.32
Os08t0508700-01	Rice	nucleus	65.15	64.62
OQU80929	Sorghum	nucleus	64.98	64.56
TraesCS5D01G273600.1	Wheat	nucleus	60.91	61.11
Zm00001d031445_P001	Maize	nucleus	62.54	60.76
GSMUA_Achr9P27680_001	Banana	nucleus	50.98	51.31
GSMUA_Achr3P11160_001	Banana	nucleus	45.93	49.39
GSMUA_Achr8P25580_001	Banana	nucleus	49.02	48.86
AT1G73730.1	Thale cress	nucleus	38.76	41.98
Bra008110.1-P	Field mustard	nucleus	36.65	41.74
VIT_06s0004g01610.t01	Wine grape	nucleus	41.04	40.45
CDY60137	Canola	nucleus	38.6	40.37
CDX73009	Canola	nucleus	38.44	40.34
Bra015970.1-P	Field mustard	nucleus	38.44	40.2
KRH23176	Soybean	nucleus	38.6	40.1
KRH10163	Soybean	nucleus	38.44	40.0
Bra003831.1-P	Field mustard	nucleus	35.5	39.49
CDY11093	Canola	nucleus	36.16	39.29
CDY47740	Canola	nucleus	36.97	39.0
Solyc01g006650.1.1	Tomato	nucleus	38.11	35.45
PGSC0003DMT400055102	Potato	nucleus	38.11	35.03
Solyc01g014480.2.1	Tomato	nucleus	38.44	34.96
PGSC0003DMT400076890	Potato	nucleus	38.27	34.71
TraesCS4D01G177000.1	Wheat	nucleus	35.67	33.64
TraesCS3D01G390000.1	Wheat	nucleus	23.94	32.1
TraesCS2D01G320800.1	Wheat	nucleus	23.94	31.61
TraesCS6D01G326600.1	Wheat	nucleus	23.45	31.44
TraesCS2D01G099400.1	Wheat	nucleus	31.11	30.81

Protein Annotations

Gene3D:1.10.3180.10	MapMan:11.5.2.4	MapMan:15.5.11	ncoils:Coil	InterPro:Ethylene_insens-like_DNA-bd	GO:GO:0003674
GO:GO:0003700	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR023278	PFAM:PF04873
PANTHER:PTHR33305	PANTHER:PTHR33305:SF3	SUPFAM:SSF116768	EnsemblPlantsGene:TraesCS7D01G244600	EnsemblPlants:TraesCS7D01G244600.1	SEG:seg

Description

No Description!

Coordinates

chr7D:+:213373791..213377135

Molecular Weight (calculated)

67928.0 Da

IEP (calculated)

5.943

GRAVY (calculated)

-0.626

Length

614 amino acids

Sequence
(BLAST)

001: MMDNLAIVTK ELGDVSDFEV DGIPNLSEND VSDEEIEAEE LARRMWKDKV RLKRIKEKQQ RLALEQAELE KSKPKKLSDL ALRKKMARAQ DGILKYMLKL
101: MEVCNAQGFV YGIIPDKGKP VSGASDNIRA WWKEKVKFDK NGPAAIAKYE VENSLLVNAK SSGTMNQYSL MDLQDGTLGS LLSALMQHCS PQQRKYPLDK
201: GIPPPWWPSG NEEWWIALGL PKGKTPPYRK PHDLKKVWKV GVLMGVIKHL SPNFDKIRYH VRKSKCLQDK MTAKESLIWL VVLQREEYVH SIGNGVSDTH
301: LVNLGDKHES SYSSCDEYDV DCMEEPPKST ISKDDVGVHQ PAVHIREENG SSSGNKKRHD KRSTQTLPST KETKKPPKRR RHTGQCSVDG SEVEGTQRND
401: NMPEVLSNAI PDMNSNQMEV VCVANPLTSF NHAGTNGGSL QHQGDVQGNF VPPGVVVNNY SQAANIAPSS IYMVDQPLAS ESNDYTNSWP GNTFQPDVGL
501: GSIGFSSSSH DYQSSAAKHS VPLPTDNHVP AMGTGALNSS YSHHMAGSGN STSVAGDTQQ IMSDAFYIDP DDKFIGSSFD GLPLDFIGIN SPIPDLDELD
601: ELLDDNDLMQ YLGT

Best Arabidopsis Sequence Match ( AT1G73730.1 )
(BLAST)

001: MGDLAMSVAD IRMENEPDDL ASDNVAEIDV SDEEIDADDL ERRMWKDRVR LKRIKERQKA GSQGAQTKET PKKISDQAQR KKMSRAQDGI LKYMLKLMEV
101: CKVRGFVYGI IPEKGKPVSG SSDNIRAWWK EKVKFDKNGP AAIAKYEEEC LAFGKSDGNR NSQFVLQDLQ DATLGSLLSS LMQHCDPPQR KYPLEKGTPP
201: PWWPTGNEEW WVKLGLPKSQ SPPYRKPHDL KKMWKVGVLT AVINHMLPDI AKIKRHVRQS KCLQDKMTAK ESAIWLAVLN QEESLIQQPS SDNGNSNVTE
301: THRRGNNADR RKPVVNSDSD YDVDGTEEAS GSVSSKDSRR NQIQKEQPTA ISHSVRDQDK AEKHRRRKRP RIRSGTVNRQ EEEQPEAQQR NILPDMNHVD
401: APLLEYNING THQEDDVVDP NIALGPEDNG LELVVPEFNN NYTYLPLVNE QTMMPVDERP MLYGPNPNQE LQFGSGYNFY NPSAVFVHNQ EDDILHTQIE
501: MNTQAPPHNS GFEEAPGGVL QPLGLLGNED GVTGSELPQY QSGILSPLTD LDFDYGGFGD DFSWFGA

Arabidopsis Description

EIL3SLIM1 [Source:UniProtKB/TrEMBL;Acc:A0A178VZZ3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.