Factsheet for HORVU7Hr1G050590.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU7Hr1G050560.1	Barley	nucleus	81.85	38.86
TraesCS7B01G145400.1	Wheat	nucleus	74.32	35.4
TraesCS7D01G244600.1	Wheat	nucleus	74.32	35.34
TraesCS7A01G246100.1	Wheat	nucleus	73.29	34.85
HORVU0Hr1G011440.1	Barley	nucleus	38.7	29.2
OQU80929	Sorghum	nucleus	53.42	25.24
Os08t0508700-01	Rice	nucleus	53.42	25.2
HORVU5Hr1G073380.1	Barley	nucleus	50.0	23.97
Zm00001d031445_P001	Maize	nucleus	51.03	23.58
GSMUA_Achr3P11160_001	Banana	nucleus	43.15	22.07
GSMUA_Achr8P25580_001	Banana	nucleus	41.1	19.48
GSMUA_Achr9P27680_001	Banana	nucleus	40.41	19.34
HORVU3Hr1G089250.3	Barley	nucleus	26.37	16.67
HORVU2Hr1G079900.1	Barley	nucleus	26.71	16.6
HORVU4Hr1G051680.1	Barley	nucleus	35.27	15.82

Protein Annotations

Gene3D:1.10.3180.10	MapMan:11.5.2.4	MapMan:15.5.11	UniProt:A0A287WG53	ncoils:Coil	InterPro:Ethylene_insens-like_DNA-bd
GO:GO:0003674	GO:GO:0003700	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
EnsemblPlantsGene:HORVU7Hr1G050590	EnsemblPlants:HORVU7Hr1G050590.1	InterPro:IPR023278	PFAM:PF04873	PANTHER:PTHR33305	PANTHER:PTHR33305:SF3
SUPFAM:SSF116768	UniParc:UPI000B469D53	SEG:seg	:	:	:

Description

No Description!

Coordinates

chrchr7H:-:183657690..183658998

Molecular Weight (calculated)

29694.2 Da

IEP (calculated)

9.291

GRAVY (calculated)

-0.780

Length

292 amino acids

Sequence
(BLAST)

001: MDLQDGTLGS LLSALMQHCS PQQRKYPLDK GIPPPWWPSG NEEWWIALGL PKGKTPPYKK PHDLKKFWKI GVLTAVIKHM SPHFDKIRYH VRKSKCLQDK
101: MTAKESLIWL VVLQREEYAH SIDNGVSDTH HCDLGDKNGS SYSSCDEYDV DCMEEPPQST ISKDDVGVRQ PAVHIREENA SSSGNKKRHD KRSTQTLPST
201: KETKKPLKRR KHIGQFSVDG SEVERTQRXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXCILYDVFD VGTFYRSYSK KGSHPFQQTW FH

Best Arabidopsis Sequence Match ( AT1G73730.1 )
(BLAST)

001: MGDLAMSVAD IRMENEPDDL ASDNVAEIDV SDEEIDADDL ERRMWKDRVR LKRIKERQKA GSQGAQTKET PKKISDQAQR KKMSRAQDGI LKYMLKLMEV
101: CKVRGFVYGI IPEKGKPVSG SSDNIRAWWK EKVKFDKNGP AAIAKYEEEC LAFGKSDGNR NSQFVLQDLQ DATLGSLLSS LMQHCDPPQR KYPLEKGTPP
201: PWWPTGNEEW WVKLGLPKSQ SPPYRKPHDL KKMWKVGVLT AVINHMLPDI AKIKRHVRQS KCLQDKMTAK ESAIWLAVLN QEESLIQQPS SDNGNSNVTE
301: THRRGNNADR RKPVVNSDSD YDVDGTEEAS GSVSSKDSRR NQIQKEQPTA ISHSVRDQDK AEKHRRRKRP RIRSGTVNRQ EEEQPEAQQR NILPDMNHVD
401: APLLEYNING THQEDDVVDP NIALGPEDNG LELVVPEFNN NYTYLPLVNE QTMMPVDERP MLYGPNPNQE LQFGSGYNFY NPSAVFVHNQ EDDILHTQIE
501: MNTQAPPHNS GFEEAPGGVL QPLGLLGNED GVTGSELPQY QSGILSPLTD LDFDYGGFGD DFSWFGA

Arabidopsis Description

EIL3SLIM1 [Source:UniProtKB/TrEMBL;Acc:A0A178VZZ3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.