Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G428000.1 | Wheat | nucleus | 88.1 | 93.14 |
| TraesCS3A01G396000.1 | Wheat | nucleus | 89.39 | 91.37 |
| TraesCS3D01G390000.1 | Wheat | nucleus | 89.61 | 90.39 |
| Zm00001d016924_P001 | Maize | nucleus | 60.39 | 65.03 |
| Zm00001d050861_P001 | Maize | nucleus | 61.69 | 64.63 |
| EES05301 | Sorghum | nucleus | 65.37 | 63.18 |
| GSMUA_Achr10P... | Banana | nucleus | 39.39 | 54.01 |
| HORVU2Hr1G079900.1 | Barley | nucleus | 50.87 | 50.0 |
| CDX81161 | Canola | nucleus | 16.67 | 40.1 |
| KRH31276 | Soybean | nucleus | 32.25 | 37.44 |
| HORVU0Hr1G011440.1 | Barley | nucleus | 30.52 | 36.43 |
| Bra028601.1-P | Field mustard | nucleus | 34.2 | 34.73 |
| CDX85778 | Canola | nucleus | 34.2 | 34.73 |
| CDY40078 | Canola | nucleus | 33.98 | 34.66 |
| KRG97597 | Soybean | nucleus | 34.2 | 34.05 |
| Solyc03g096630.1.1 | Tomato | nucleus | 31.6 | 33.64 |
| KRH43217 | Soybean | nucleus | 32.9 | 33.55 |
| KRH59382 | Soybean | nucleus | 32.68 | 32.68 |
| PGSC0003DMT400053147 | Potato | nucleus | 31.82 | 32.52 |
| AT5G10120.1 | Thale cress | nucleus | 33.12 | 32.48 |
| VIT_00s0357g00120.t01 | Wine grape | nucleus | 32.68 | 31.2 |
| Solyc04g054840.1.1 | Tomato | nucleus | 30.52 | 28.03 |
| AT5G65100.1 | Thale cress | nucleus | 33.12 | 27.47 |
| HORVU7Hr1G050590.1 | Barley | nucleus | 16.67 | 26.37 |
| CDX78369 | Canola | nucleus | 18.61 | 26.14 |
| Bra006050.1-P | Field mustard | nucleus | 18.61 | 26.14 |
| HORVU4Hr1G051680.1 | Barley | nucleus | 36.15 | 25.65 |
| HORVU5Hr1G073380.1 | Barley | nucleus | 32.68 | 24.79 |
| HORVU7Hr1G050560.1 | Barley | nucleus | 32.47 | 24.39 |
| PGSC0003DMT400043160 | Potato | nucleus | 13.2 | 21.94 |
| Bra024354.1-P | Field mustard | nucleus | 15.58 | 20.28 |
| CDY08821 | Canola | nucleus | 15.15 | 19.72 |
| CDY14539 | Canola | nucleus | 15.8 | 19.62 |
Protein Annotations
| Gene3D:1.10.3180.10 | MapMan:11.5.2.4 | MapMan:15.5.11 | UniProt:A0A287M6N0 | ncoils:Coil | InterPro:Ethylene_insens-like_DNA-bd |
| GO:GO:0003674 | GO:GO:0003700 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| EnsemblPlantsGene:HORVU3Hr1G089250 | EnsemblPlants:HORVU3Hr1G089250.3 | InterPro:IPR023278 | PFAM:PF04873 | PANTHER:PTHR33305 | PANTHER:PTHR33305:SF7 |
| SUPFAM:SSF116768 | UniParc:UPI000B487D9A | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chrchr3H:+:627875118..627876506
Molecular Weight (calculated)
50849.3 Da
IEP (calculated)
5.317
GRAVY (calculated)
-0.694
Length
462 amino acids
Sequence
(BLAST)
(BLAST)
001: MNKGTHGSRR HLPAESGMEH GDGPGGPDPG GQQEGEEEMS DSESGSEPVE ISDLKKRMWK DQMLLTRLEG RAGARGVAAA AAAAAARASS SMSGSGQEEP
101: PDVRCRRKAM LRAQDGVLRH MLRMMEACNA RGFVYGVIDE AGEPMSGSSD SLRGWWKENV SFDRAGPMGL VGPMGESPVG LASSLHRLQD IQDSTLGSVL
201: SALIQHCEPP QRSFPLERGL APPWWPTGHE SWWGTQGEMQ AHQGVPPYRK PHDLKKAWKI SLLSAVIKHM SPRFDQMRKL VWQSKRLQQK MSAKESETWS
301: KVLRQEEALG SRLKSSLCIT PFDREEEEEE EGEEVKKKKA GKERDDDGLE SVVRGAQDKR KREMSRSGSS GGSGSELTIM LPDQLATAIT EESRSPINEL
401: MKLYYGCMQG VESYGDREKD DLPPMHSVLL PLGGIDEVAQ DVLFDIIGSC PEVDDVLRLM GE
101: PDVRCRRKAM LRAQDGVLRH MLRMMEACNA RGFVYGVIDE AGEPMSGSSD SLRGWWKENV SFDRAGPMGL VGPMGESPVG LASSLHRLQD IQDSTLGSVL
201: SALIQHCEPP QRSFPLERGL APPWWPTGHE SWWGTQGEMQ AHQGVPPYRK PHDLKKAWKI SLLSAVIKHM SPRFDQMRKL VWQSKRLQQK MSAKESETWS
301: KVLRQEEALG SRLKSSLCIT PFDREEEEEE EGEEVKKKKA GKERDDDGLE SVVRGAQDKR KREMSRSGSS GGSGSELTIM LPDQLATAIT EESRSPINEL
401: MKLYYGCMQG VESYGDREKD DLPPMHSVLL PLGGIDEVAQ DVLFDIIGSC PEVDDVLRLM GE
001: MENEPDDLAS DNVAEIDVSD EEIDADDLER RMWKDRVRLK RIKERQKAGS QGAQTKETPK KISDQAQRKK MSRAQDGILK YMLKLMEVCK VRGFVYGIIP
101: EKGKPVSGSS DNIRAWWKEK VKFDKNGPAA IAKYEEECLA FGKSDGNRNS QFVLQDLQDA TLGSLLSSLM QHCDPPQRKY PLEKGTPPPW WPTGNEEWWV
201: KLGLPKSQSP PYRKPHDLKK MWKVGVLTAV INHMLPDIAK IKRHVRQSKC LQDKMTAKES AIWLAVLNQE ESLIQQPSSD NGNSNVTETH RRGNNADRRK
301: PVVNSDSDYD VDGTEEASGS VSSKDSRRNQ IQKEQPTAIS HSVRDQDKAE KHRRRKRPRI RSGTVNRQEE EQPEAQQRNI LPDMNHVDAP LLEYNINGTH
401: QEDDVVDPNI ALGPEDNGLE LVVPEFNNNY TYLPLVNEQT MMPVDERPML YGPNPNQELQ FGSGYNFYNP SAVFVHNQED DILHTQIEMN TQAPPHNSGF
501: EEAPGGVLQP LGLLGNEDGV TGSELPQYQS GILSPLTDLD FDYGGFGDDF SWFGA
101: EKGKPVSGSS DNIRAWWKEK VKFDKNGPAA IAKYEEECLA FGKSDGNRNS QFVLQDLQDA TLGSLLSSLM QHCDPPQRKY PLEKGTPPPW WPTGNEEWWV
201: KLGLPKSQSP PYRKPHDLKK MWKVGVLTAV INHMLPDIAK IKRHVRQSKC LQDKMTAKES AIWLAVLNQE ESLIQQPSSD NGNSNVTETH RRGNNADRRK
301: PVVNSDSDYD VDGTEEASGS VSSKDSRRNQ IQKEQPTAIS HSVRDQDKAE KHRRRKRPRI RSGTVNRQEE EQPEAQQRNI LPDMNHVDAP LLEYNINGTH
401: QEDDVVDPNI ALGPEDNGLE LVVPEFNNNY TYLPLVNEQT MMPVDERPML YGPNPNQELQ FGSGYNFYNP SAVFVHNQED DILHTQIEMN TQAPPHNSGF
501: EEAPGGVLQP LGLLGNEDGV TGSELPQYQS GILSPLTDLD FDYGGFGDDF SWFGA
Arabidopsis Description
EIL3SLIM1 [Source:UniProtKB/TrEMBL;Acc:A0A178VZZ3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.