Factsheet for TraesCS3A01G396000.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G390000.1	Wheat	nucleus	96.46	95.2
TraesCS3B01G428000.1	Wheat	nucleus	90.71	93.82
HORVU3Hr1G089250.3	Barley	nucleus	91.37	89.39
Zm00001d016924_P001	Maize	nucleus	62.17	65.5
Zm00001d050861_P001	Maize	nucleus	62.39	63.95
EES05301	Sorghum	nucleus	66.37	62.76
GSMUA_Achr10P...	Banana	nucleus	40.93	54.9
TraesCS2A01G342500.1	Wheat	nucleus	53.1	51.5
CDX81161	Canola	nucleus	17.04	40.1
KRH31276	Soybean	nucleus	33.41	37.94
Bra028601.1-P	Field mustard	nucleus	35.62	35.38
CDX85778	Canola	nucleus	35.62	35.38
CDY40078	Canola	nucleus	35.4	35.32
KRH43217	Soybean	nucleus	34.07	34.0
PGSC0003DMT400053147	Potato	nucleus	33.85	33.85
Solyc03g096630.1.1	Tomato	nucleus	32.3	33.64
KRH59382	Soybean	nucleus	34.07	33.33
KRG97597	Soybean	nucleus	34.07	33.19
AT5G10120.1	Thale cress	nucleus	34.29	32.91
VIT_00s0357g00120.t01	Wine grape	nucleus	33.85	31.61
TraesCS4A01G129400.1	Wheat	nucleus	36.06	29.8
Solyc04g054840.1.1	Tomato	nucleus	32.52	29.22
AT5G65100.1	Thale cress	nucleus	34.29	27.83
Bra006050.1-P	Field mustard	nucleus	18.81	25.84
CDX78369	Canola	nucleus	18.81	25.84
TraesCS2A01G099900.1	Wheat	nucleus	34.96	25.57
TraesCS7A01G246100.1	Wheat	nucleus	32.96	24.27
TraesCS5A01G265700.1	Wheat	nucleus	29.87	23.16
PGSC0003DMT400043160	Potato	nucleus	14.16	23.02
Bra024354.1-P	Field mustard	nucleus	15.71	20.0
CDY08821	Canola	nucleus	15.49	19.72
CDY14539	Canola	nucleus	16.15	19.62

Protein Annotations

Gene3D:1.10.3180.10	MapMan:11.5.2.4	MapMan:15.5.11	InterPro:Ethylene_insens-like_DNA-bd	GO:GO:0003674	GO:GO:0003700
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR023278	PFAM:PF04873	PANTHER:PTHR33305
PANTHER:PTHR33305:SF7	SUPFAM:SSF116768	EnsemblPlantsGene:TraesCS3A01G396000	EnsemblPlants:TraesCS3A01G396000.1	SEG:seg	:

Description

No Description!

Coordinates

chr3A:-:643209442..643210800

Molecular Weight (calculated)

50248.5 Da

IEP (calculated)

5.684

GRAVY (calculated)

-0.742

Length

452 amino acids

Sequence
(BLAST)

001: MDKGIHGRRH LSAESADMEH GDGPGGKQRE EEEISDSESG SESLEISDLK KRMWKDQMLL TRLEGRAGAR GAAPAPAARA SPSSSSGQEE PPDVRCRRKA
101: MLRAQDGVLR HMLRMMEACN ARGFVYGVID EAGEPMSGSS DSLRGWWKEN VSFDRAGPMG LAGPMGESPV ALASSLHRLQ DIQDSTLGSV LSALIQHCEP
201: PQRSFPLERG LAPPWWPTGH EPWWGTQGEM QAHQGVPPYR KPHDLKKAWK VSLLSAVIKH MSPRFDQMRK LVWQSKRLQQ KMSAKESETW SKVLRQEEKL
301: SSRLKSSLRI TPFDQEQADE EDDDEEVKKK KVGKDRDDDG LESVVRGAQD KRKREISRSG SSGGSGSELT IMLPDQLAAA ITEESRSPID ELMKLYYGCM
401: QGVETYGDRE KDDLPPMHSV LLGGIDEVAQ DVLFDIIGSC PEVDHVLRLM GE

Best Arabidopsis Sequence Match ( AT1G73730.1 )
(BLAST)

001: MGDLAMSVAD IRMENEPDDL ASDNVAEIDV SDEEIDADDL ERRMWKDRVR LKRIKERQKA GSQGAQTKET PKKISDQAQR KKMSRAQDGI LKYMLKLMEV
101: CKVRGFVYGI IPEKGKPVSG SSDNIRAWWK EKVKFDKNGP AAIAKYEEEC LAFGKSDGNR NSQFVLQDLQ DATLGSLLSS LMQHCDPPQR KYPLEKGTPP
201: PWWPTGNEEW WVKLGLPKSQ SPPYRKPHDL KKMWKVGVLT AVINHMLPDI AKIKRHVRQS KCLQDKMTAK ESAIWLAVLN QEESLIQQPS SDNGNSNVTE
301: THRRGNNADR RKPVVNSDSD YDVDGTEEAS GSVSSKDSRR NQIQKEQPTA ISHSVRDQDK AEKHRRRKRP RIRSGTVNRQ EEEQPEAQQR NILPDMNHVD
401: APLLEYNING THQEDDVVDP NIALGPEDNG LELVVPEFNN NYTYLPLVNE QTMMPVDERP MLYGPNPNQE LQFGSGYNFY NPSAVFVHNQ EDDILHTQIE
501: MNTQAPPHNS GFEEAPGGVL QPLGLLGNED GVTGSELPQY QSGILSPLTD LDFDYGGFGD DFSWFGA

Arabidopsis Description

EIL3SLIM1 [Source:UniProtKB/TrEMBL;Acc:A0A178VZZ3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.