Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc03g096630.1.1 | Tomato | nucleus | 85.25 | 54.61 |
| CDX81161 | Canola | nucleus | 25.54 | 36.98 |
| Bra024354.1-P | Field mustard | nucleus | 33.81 | 26.48 |
| CDY08821 | Canola | nucleus | 33.45 | 26.2 |
| Bra006050.1-P | Field mustard | nucleus | 30.22 | 25.53 |
| CDX78369 | Canola | nucleus | 30.22 | 25.53 |
| CDY14539 | Canola | nucleus | 33.45 | 25.0 |
| KRH59382 | Soybean | nucleus | 39.57 | 23.81 |
| PGSC0003DMT400053147 | Potato | nucleus | 37.77 | 23.23 |
| KRH31276 | Soybean | nucleus | 33.09 | 23.12 |
| KRH43217 | Soybean | nucleus | 37.41 | 22.96 |
| VIT_00s0357g00120.t01 | Wine grape | nucleus | 36.69 | 21.07 |
| KRG97597 | Soybean | nucleus | 34.53 | 20.69 |
| CDY40078 | Canola | nucleus | 33.09 | 20.31 |
| CDX85778 | Canola | nucleus | 33.09 | 20.22 |
| Bra028601.1-P | Field mustard | nucleus | 33.09 | 20.22 |
| AT5G10120.1 | Thale cress | nucleus | 32.37 | 19.11 |
| AT5G65100.1 | Thale cress | nucleus | 34.89 | 17.41 |
| Os04t0456900-00 | Rice | nucleus | 20.5 | 16.81 |
| GSMUA_Achr10P... | Banana | nucleus | 19.42 | 16.02 |
| TraesCS2B01G340200.1 | Wheat | nucleus | 25.54 | 15.24 |
| HORVU2Hr1G079900.1 | Barley | nucleus | 24.82 | 14.68 |
| TraesCS6D01G326600.1 | Wheat | nucleus | 24.1 | 14.63 |
| TraesCS2D01G320800.1 | Wheat | nucleus | 24.46 | 14.62 |
| Zm00001d050861_P001 | Maize | nucleus | 23.02 | 14.51 |
| KXG26452 | Sorghum | nucleus | 24.46 | 14.47 |
| TraesCS3D01G390000.1 | Wheat | nucleus | 23.74 | 14.41 |
| PGSC0003DMT400070751 | Potato | nucleus | 30.94 | 14.38 |
| TraesCS2A01G342500.1 | Wheat | nucleus | 24.1 | 14.38 |
| PGSC0003DMT400022477 | Potato | nucleus | 31.65 | 14.33 |
| Zm00001d016924_P001 | Maize | nucleus | 21.94 | 14.22 |
| TraesCS6B01G376700.1 | Wheat | nucleus | 23.38 | 14.19 |
| TraesCS3B01G428000.1 | Wheat | nucleus | 22.3 | 14.19 |
| TraesCS3A01G396000.1 | Wheat | nucleus | 23.02 | 14.16 |
| TraesCSU01G080900.1 | Wheat | nucleus | 22.66 | 13.94 |
| PGSC0003DMT400015145 | Potato | nucleus | 29.5 | 13.69 |
| PGSC0003DMT400015148 | Potato | nucleus | 29.86 | 13.61 |
| EES05301 | Sorghum | nucleus | 23.38 | 13.6 |
| HORVU3Hr1G089250.3 | Barley | nucleus | 21.94 | 13.2 |
| Zm00001d003451_P001 | Maize | nucleus | 25.18 | 13.16 |
| PGSC0003DMT400076890 | Potato | nucleus | 30.22 | 12.41 |
| PGSC0003DMT400055102 | Potato | nucleus | 28.06 | 11.68 |
Protein Annotations
| MapMan:11.5.2.4 | MapMan:15.5.11 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | UniProt:M1BE71 | PFAM:PF04873 | EnsemblPlantsGene:PGSC0003DMG400016747 |
| PGSC:PGSC0003DMG400016747 | EnsemblPlants:PGSC0003DMT400043160 | PANTHER:PTHR33305 | PANTHER:PTHR33305:SF10 | UniParc:UPI000294A874 | SEG:seg |
Description
Transcription factor [Source:PGSC_GENE;Acc:PGSC0003DMG400016747]
Coordinates
chr3:-:34009625..34010941
Molecular Weight (calculated)
32288.7 Da
IEP (calculated)
4.545
GRAVY (calculated)
-0.886
Length
278 amino acids
Sequence
(BLAST)
(BLAST)
001: MVEFHEIVEP SSDPMRELLE VGDDEENISY NDLKKRMWKD RMKLQKLEAK RDMSSFKDES DETQAKQEEQ SRRKKMSRAQ DSILKYMVKI MEVCKGQGFV
101: YGIVGEKGKP VSGSSDSLRE WWREKSLKIS SSEEEEDVAL VTKNVFVDVS ARRRKDKRKC NFEHDTRCPY CENGGLHDQE SINNLVEAQT LPREEWIAKE
201: EEISPHDWMN MEIQKSFNNY DAQFTVCSGI QNNFESYSGE NVLEQLLSYP ATCGSMNIDG TQLEADLNQE IATSIWDF
101: YGIVGEKGKP VSGSSDSLRE WWREKSLKIS SSEEEEDVAL VTKNVFVDVS ARRRKDKRKC NFEHDTRCPY CENGGLHDQE SINNLVEAQT LPREEWIAKE
201: EEISPHDWMN MEIQKSFNNY DAQFTVCSGI QNNFESYSGE NVLEQLLSYP ATCGSMNIDG TQLEADLNQE IATSIWDF
001: MENEPDDLAS DNVAEIDVSD EEIDADDLER RMWKDRVRLK RIKERQKAGS QGAQTKETPK KISDQAQRKK MSRAQDGILK YMLKLMEVCK VRGFVYGIIP
101: EKGKPVSGSS DNIRAWWKEK VKFDKNGPAA IAKYEEECLA FGKSDGNRNS QFVLQDLQDA TLGSLLSSLM QHCDPPQRKY PLEKGTPPPW WPTGNEEWWV
201: KLGLPKSQSP PYRKPHDLKK MWKVGVLTAV INHMLPDIAK IKRHVRQSKC LQDKMTAKES AIWLAVLNQE ESLIQQPSSD NGNSNVTETH RRGNNADRRK
301: PVVNSDSDYD VDGTEEASGS VSSKDSRRNQ IQKEQPTAIS HSVRDQDKAE KHRRRKRPRI RSGTVNRQEE EQPEAQQRNI LPDMNHVDAP LLEYNINGTH
401: QEDDVVDPNI ALGPEDNGLE LVVPEFNNNY TYLPLVNEQT MMPVDERPML YGPNPNQELQ FGSGYNFYNP SAVFVHNQED DILHTQIEMN TQAPPHNSGF
501: EEAPGGVLQP LGLLGNEDGV TGSELPQYQS GILSPLTDLD FDYGGFGDDF SWFGA
101: EKGKPVSGSS DNIRAWWKEK VKFDKNGPAA IAKYEEECLA FGKSDGNRNS QFVLQDLQDA TLGSLLSSLM QHCDPPQRKY PLEKGTPPPW WPTGNEEWWV
201: KLGLPKSQSP PYRKPHDLKK MWKVGVLTAV INHMLPDIAK IKRHVRQSKC LQDKMTAKES AIWLAVLNQE ESLIQQPSSD NGNSNVTETH RRGNNADRRK
301: PVVNSDSDYD VDGTEEASGS VSSKDSRRNQ IQKEQPTAIS HSVRDQDKAE KHRRRKRPRI RSGTVNRQEE EQPEAQQRNI LPDMNHVDAP LLEYNINGTH
401: QEDDVVDPNI ALGPEDNGLE LVVPEFNNNY TYLPLVNEQT MMPVDERPML YGPNPNQELQ FGSGYNFYNP SAVFVHNQED DILHTQIEMN TQAPPHNSGF
501: EEAPGGVLQP LGLLGNEDGV TGSELPQYQS GILSPLTDLD FDYGGFGDDF SWFGA
Arabidopsis Description
EIL3SLIM1 [Source:UniProtKB/TrEMBL;Acc:A0A178VZZ3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.