Factsheet for PGSC0003DMT400070751

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g096810.2.1	Tomato	nucleus	96.32	95.84
VIT_13s0047g00250.t01	Wine grape	nucleus	58.03	56.33
GSMUA_Achr6P15930_001	Banana	nucleus	45.99	53.09
PGSC0003DMT400022477	Potato	nucleus	53.34	51.95
GSMUA_Achr10P...	Banana	nucleus	45.32	51.92
PGSC0003DMT400015145	Potato	nucleus	51.51	51.42
PGSC0003DMT400015148	Potato	nucleus	51.67	50.66
TraesCS4A01G129400.1	Wheat	nucleus	44.31	48.45
GSMUA_Achr3P09440_001	Banana	nucleus	41.81	47.26
Os07t0685700-01	Rice	mitochondrion, nucleus	45.32	45.7
GSMUA_Achr2P11540_001	Banana	nucleus	45.32	44.87
Os03t0324300-02	Rice	nucleus	47.66	44.46
GSMUA_Achr5P27670_001	Banana	nucleus	46.15	44.02
GSMUA_Achr8P21550_001	Banana	nucleus	46.49	43.85
Zm00001d022530_P001	Maize	nucleus	33.28	43.83
Os03t0324200-01	Rice	nucleus	47.16	43.79
EER94933	Sorghum	nucleus	46.99	43.7
TraesCS4B01G175100.1	Wheat	nucleus	47.32	43.54
Zm00001d047563_P001	Maize	nucleus	46.66	43.46
GSMUA_Achr9P17080_001	Banana	nucleus	44.98	43.25
GSMUA_Achr11P...	Banana	nucleus	42.81	43.24
TraesCS4D01G177000.1	Wheat	nucleus	46.99	43.16
Zm00001d028974_P001	Maize	nucleus	46.49	42.97
HORVU4Hr1G051680.1	Barley	nucleus	46.66	42.86
PGSC0003DMT400053147	Potato	nucleus	31.1	41.15
Zm00001d007188_P001	Maize	nucleus	40.8	41.01
OQU90496	Sorghum	nucleus	39.97	40.24
TraesCS2B01G116900.1	Wheat	nucleus	39.8	38.45
TraesCS2D01G099400.1	Wheat	nucleus	39.8	38.39
TraesCS2A01G099900.1	Wheat	nucleus	39.46	38.19
PGSC0003DMT400055102	Potato	nucleus	35.28	31.59
PGSC0003DMT400076890	Potato	nucleus	35.45	31.31
PGSC0003DMT400043160	Potato	nucleus	14.38	30.94

Protein Annotations

Gene3D:1.10.3180.10	MapMan:11.5.2.4	MapMan:15.5.11	ncoils:Coil	InterPro:Ethylene_insens-like_DNA-bd	GO:GO:0003674
GO:GO:0003700	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR023278
UniProt:M1CMM3	PFAM:PF04873	EnsemblPlantsGene:PGSC0003DMG400027507	PGSC:PGSC0003DMG400027507	EnsemblPlants:PGSC0003DMT400070751	PANTHER:PTHR33305
PANTHER:PTHR33305:SF6	SUPFAM:SSF116768	UniParc:UPI000296E60B	SEG:seg	:	:

Description

EIL3 [Source:PGSC_GENE;Acc:PGSC0003DMG400027507]

Coordinates

chr1:-:74544912..74547535

Molecular Weight (calculated)

67614.7 Da

IEP (calculated)

5.088

GRAVY (calculated)

-0.659

Length

598 amino acids

Sequence
(BLAST)

001: MGFSGNFEFL SDSMGCGGDV AQEVEDKPVG LEEEDYSDEE MDVDELERRM WRDRMLLRRL KEKNKNKEVG DGVKQRQSQE QARRKKMSRA QDGILKYMLK
101: MMEVCNAQGF VYGIIPEKGK PVTGASDNLR AWWKEKVRFD RNGPAAIAKY QADNQIPGRV EESSVIVSTP HTLQELQDTT LGSLLSALMQ HCDPPQRRFP
201: LEKGVSPPWW PSGKEDWWGQ LGLPNDQVQP PYKKPHDLKK AWKVGVLTAV IKHISPDIAK IRKLVRQSKC LQDKMTAKES ATWLAIINQE EALARKLYPD
301: SYPHGSLAIG NGSFFISDAS DYDVEGVDDE RNNEVECKPH DINLQTGIML PKDRILMPGL APVKGEIIDL TCDFIQKRKQ PCFEESVDQK IYTCEYLHCP
401: YSNYQAGFLD RTSRNNHQMS CPFRFNSAQT LSTPKYQINY EHNTVFPAQT APSKPAVSSV TASSSMSASG LGLPEDDQRI ISDLITSYDN NFQQNGSICS
501: GISEILVNQN LQQQQTVELP MDGNFNLGHM ETSAQETSMP AYRSTEFQYD QCKMSFDAPF GGNINDITDY RFGSPFNLGG SDYAMEQLTK QDISTWYL

Best Arabidopsis Sequence Match ( AT1G73730.1 )
(BLAST)

001: MGDLAMSVAD IRMENEPDDL ASDNVAEIDV SDEEIDADDL ERRMWKDRVR LKRIKERQKA GSQGAQTKET PKKISDQAQR KKMSRAQDGI LKYMLKLMEV
101: CKVRGFVYGI IPEKGKPVSG SSDNIRAWWK EKVKFDKNGP AAIAKYEEEC LAFGKSDGNR NSQFVLQDLQ DATLGSLLSS LMQHCDPPQR KYPLEKGTPP
201: PWWPTGNEEW WVKLGLPKSQ SPPYRKPHDL KKMWKVGVLT AVINHMLPDI AKIKRHVRQS KCLQDKMTAK ESAIWLAVLN QEESLIQQPS SDNGNSNVTE
301: THRRGNNADR RKPVVNSDSD YDVDGTEEAS GSVSSKDSRR NQIQKEQPTA ISHSVRDQDK AEKHRRRKRP RIRSGTVNRQ EEEQPEAQQR NILPDMNHVD
401: APLLEYNING THQEDDVVDP NIALGPEDNG LELVVPEFNN NYTYLPLVNE QTMMPVDERP MLYGPNPNQE LQFGSGYNFY NPSAVFVHNQ EDDILHTQIE
501: MNTQAPPHNS GFEEAPGGVL QPLGLLGNED GVTGSELPQY QSGILSPLTD LDFDYGGFGD DFSWFGA

Arabidopsis Description

EIL3SLIM1 [Source:UniProtKB/TrEMBL;Acc:A0A178VZZ3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.