Factsheet for VIT_13s0047g00250.t01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_06s0009g01380.t01	Wine grape	nucleus	64.29	64.92
GSMUA_Achr6P15930_001	Banana	nucleus	49.19	58.49
Solyc01g096810.2.1	Tomato	nucleus	56.82	58.24
PGSC0003DMT400070751	Potato	nucleus	56.33	58.03
GSMUA_Achr10P...	Banana	nucleus	47.89	56.51
TraesCS4A01G129400.1	Wheat	nucleus	46.75	52.65
GSMUA_Achr3P09440_001	Banana	nucleus	44.81	52.17
GSMUA_Achr2P11540_001	Banana	nucleus	50.49	51.49
GSMUA_Achr8P21550_001	Banana	nucleus	52.76	51.26
Os03t0324300-02	Rice	nucleus	52.44	50.39
GSMUA_Achr5P27670_001	Banana	nucleus	50.97	50.08
GSMUA_Achr11P...	Banana	nucleus	48.05	50.0
Os03t0324200-01	Rice	nucleus	51.95	49.69
EER94933	Sorghum	nucleus	51.79	49.61
GSMUA_Achr9P17080_001	Banana	nucleus	50.0	49.52
Zm00001d047563_P001	Maize	nucleus	51.14	49.07
Zm00001d028974_P001	Maize	nucleus	51.3	48.84
TraesCS4B01G175100.1	Wheat	nucleus	51.46	48.77
HORVU4Hr1G051680.1	Barley	nucleus	51.3	48.54
TraesCS4D01G177000.1	Wheat	nucleus	51.14	48.39
Os07t0685700-01	Rice	mitochondrion, nucleus	45.94	47.72
Zm00001d022530_P001	Maize	nucleus	33.93	46.04
TraesCS2D01G099400.1	Wheat	nucleus	44.48	44.19
TraesCS2A01G099900.1	Wheat	nucleus	43.83	43.69
TraesCS2B01G116900.1	Wheat	nucleus	43.67	43.46
OQU90496	Sorghum	nucleus	41.88	43.43
Zm00001d007188_P001	Maize	nucleus	41.72	43.19
VIT_00s0357g00120.t01	Wine grape	nucleus	31.98	40.7
VIT_06s0004g01610.t01	Wine grape	nucleus	39.12	38.68

Protein Annotations

Gene3D:1.10.3180.10	EntrezGene:100250496	wikigene:100250496	MapMan:11.5.2.4	MapMan:15.5.11	ProteinID:CCB52190
ProteinID:CCB52190.1	ncoils:Coil	InterPro:Ethylene_insens-like_DNA-bd	UniProt:F6HIW5	EMBL:FN595767	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009719	GO:GO:0009873	GO:GO:0009987
GO:GO:0071281	InterPro:IPR023278	EMBL:KU238091	EntrezGene:LOC100250496	wikigene:LOC100250496	PFAM:PF04873
PANTHER:PTHR33305	PANTHER:PTHR33305:SF6	SUPFAM:SSF116768	TIGR:TC52527	TIGR:TC60202	UniParc:UPI0001985B9A
ArrayExpress:VIT_13s0047g00250	EnsemblPlantsGene:VIT_13s0047g00250	EnsemblPlants:VIT_13s0047g00250.t01	unigene:Vvi.316	RefSeq:XP_002276380	RefSeq:XP_002276380.1
RefSeq:XP_010659025.1	SEG:seg	:	:	:	:

Description

Ethylene insensitive 3-like 1 protein [Source:UniProtKB/TrEMBL;Acc:F6HIW5]

Coordinates

chr13:+:15946729..15950193

Molecular Weight (calculated)

69746.4 Da

IEP (calculated)

4.932

GRAVY (calculated)

-0.728

Length

616 amino acids

Sequence
(BLAST)

001: MGIFEEMGFC GNLDFLSAPP GEGEVAPENE PEATVEEDYS DEEMDVDELE RRMWRDRMLL RRLKEQNKGK EGVDNAKQRQ SQEQARRKKM SRAQDGILKY
101: MLKMMEVCKA QGFVYGIIPE KGKPVSGASD NLRAWWKEKV RFDRNGPAAI AKYQADHSIP GKNEDCNTMA STPHTLQELQ DTTLGSLLSA LMQHCDPPQR
201: RFPLEKGIAP PWWPTGNEEW WPQLGLPKDQ GPPPYKKPHD LKKAWKVSVL TAVIKHMSPD IAKIRKLVRQ SKCLQDKMTA KESATWLAII NQEEALSRKL
301: YPDSCPPVPL AGGSGSFVIS DTSDYDVEGV EDEANIEVEE CKPRDVNLFN LGVGARDRLM VPPLAPSIKG ELVETNSDFI QKRKQPPDEP HIMMDQKMYT
401: CEYTQCPYNN YRLAFLDRAS RNNHQMNCLY RSNSSQGFGM SNFQINNEKP AAFSLPFAQP KAAAPPVNQS PAFNVSGLGL PEDGQKMISD LMSFYDTNLQ
501: RNKSLNPGNL NVMEDQNQPQ QQQQQQKFQL QLDDNFFNQG VMMGGNITEE TNMPLNHSVF SSSEIQFDQC KAFDSPFDTN PNDNIADFRF GSPFNLAAVD
601: YTVDPLPKQD VSMWYL

Best Arabidopsis Sequence Match ( AT3G20770.1 )
(BLAST)

001: MMFNEMGMCG NMDFFSSGSL GEVDFCPVPQ AEPDSIVEDD YTDDEIDVDE LERRMWRDKM RLKRLKEQDK GKEGVDAAKQ RQSQEQARRK KMSRAQDGIL
101: KYMLKMMEVC KAQGFVYGII PENGKPVTGA SDNLREWWKD KVRFDRNGPA AITKYQAENN IPGIHEGNNP IGPTPHTLQE LQDTTLGSLL SALMQHCDPP
201: QRRFPLEKGV PPPWWPNGKE DWWPQLGLPK DQGPAPYKKP HDLKKAWKVG VLTAVIKHMF PDIAKIRKLV RQSKCLQDKM TAKESATWLA IINQEESLAR
301: ELYPESCPPL SLSGGSCSLL MNDCSQYDVE GFEKESHYEV EELKPEKVMN SSNFGMVAKM HDFPVKEEVP AGNSEFMRKR KPNRDLNTIM DRTVFTCENL
401: GCAHSEISRG FLDRNSRDNH QLACPHRDSR LPYGAAPSRF HVNEVKPVVG FPQPRPVNSV AQPIDLTGIV PEDGQKMISE LMSMYDRNVQ SNQTSMVMEN
501: QSVSLLQPTV HNHQEHLQFP GNMVEGSFFE DLNIPNRANN NNSSNNQTFF QGNNNNNNVF KFDTADHNNF EAAHNNNNNS SGNRFQLVFD STPFDMASFD
601: YRDDMSMPGV VGTMDGMQQK QQDVSIWF

Arabidopsis Description

EIN3Protein ETHYLENE INSENSITIVE 3 [Source:UniProtKB/Swiss-Prot;Acc:O24606]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.