CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
EER90022
EES06473

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G27050.1	EER90022	AT2G25490.1	14675533
AT2G27050.1	EES06473	AT2G25490.1	14675533
AT2G27050.1	EER90022	AT5G25350.1	14675533
AT2G27050.1	EES06473	AT5G25350.1	14675533
AT3G20770.1	EER90022	AT2G25490.1	14675532
AT3G20770.1	EES06473	AT2G25490.1	14675532
AT3G20770.1	EER90022	AT2G25490.1	14675533
AT3G20770.1	EES06473	AT2G25490.1	14675533
AT3G20770.1	EER90022	AT5G25350.1	14675532
AT3G20770.1	EES06473	AT5G25350.1	14675532
AT3G20770.1	EER90022	AT5G25350.1	14675533
AT3G20770.1	EES06473	AT5G25350.1	14675533

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d022530_P001	Maize	nucleus	62.79	82.16
Zm00001d007188_P001	Maize	nucleus	80.64	80.5
Os07t0685700-01	Rice	mitochondrion, nucleus	59.93	60.03
GSMUA_Achr6P15930_001	Banana	nucleus	48.99	56.18
GSMUA_Achr10P...	Banana	nucleus	49.16	55.94
TraesCS2D01G099400.1	Wheat	nucleus	58.25	55.81
TraesCS2A01G099900.1	Wheat	nucleus	57.91	55.66
TraesCS2B01G116900.1	Wheat	nucleus	57.74	55.41
EER94933	Sorghum	nucleus	54.88	50.7
GSMUA_Achr3P09440_001	Banana	nucleus	43.43	48.77
GSMUA_Achr5P27670_001	Banana	nucleus	50.0	47.37
GSMUA_Achr11P...	Banana	nucleus	46.97	47.13
GSMUA_Achr2P11540_001	Banana	nucleus	47.81	47.02
GSMUA_Achr9P17080_001	Banana	nucleus	48.99	46.78
GSMUA_Achr8P21550_001	Banana	nucleus	49.83	46.69
CDX82228	Canola	nucleus	41.41	45.47
CDY32390	Canola	nucleus	41.41	44.81
AT2G27050.1	Thale cress	nucleus	42.93	43.66
CDY38540	Canola	nucleus	41.08	43.34
CDX83250	Canola	nucleus	41.58	43.33
Bra000528.1-P	Field mustard	nucleus	41.58	43.26
CDY27563	Canola	nucleus	42.59	43.1
Bra001802.1-P	Field mustard	nucleus	42.09	43.03
KRH14682	Soybean	nucleus	43.94	42.79
KRH18695	Soybean	nucleus	44.28	42.35
KRH73465	Soybean	nucleus	43.77	42.35
VIT_13s0047g00250.t01	Wine grape	nucleus	43.43	41.88
KRG89856	Soybean	nucleus	43.94	41.83
KRH18696	Soybean	nucleus	42.42	40.78
Solyc01g096810.2.1	Tomato	nucleus	40.91	40.43
AT3G20770.1	Thale cress	nucleus	42.59	40.29
PGSC0003DMT400070751	Potato	nucleus	40.24	39.97
CDY19606	Canola	nucleus	27.95	36.09
CDY06379	Canola	nucleus	29.46	35.93
CDY60391	Canola	nucleus	24.58	34.35
Bra035746.1-P	Field mustard	nucleus	27.95	33.88
EER99089	Sorghum	nucleus	34.68	33.83
Bra023927.1-P	Field mustard	nucleus	24.92	33.41
EES05301	Sorghum	nucleus	25.76	32.01
OQU80929	Sorghum	nucleus	31.99	30.74
KXG26452	Sorghum	nucleus	22.73	28.72
EES02452	Sorghum	nucleus	8.08	14.91
OQU88707	Sorghum	nucleus, plastid	12.29	14.29

Protein Annotations

Gene3D:1.10.3180.10	MapMan:11.5.2.4	MapMan:15.5.11	UniProt:A0A1W0W805	ncoils:Coil	InterPro:Ethylene_insens-like_DNA-bd
GO:GO:0003674	GO:GO:0003700	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR023278	EnsemblPlants:OQU90496	ProteinID:OQU90496	ProteinID:OQU90496.1	PFAM:PF04873	PANTHER:PTHR33305
PANTHER:PTHR33305:SF11	EnsemblPlantsGene:SORBI_3002G422300	SUPFAM:SSF116768	UniParc:UPI0009DC8B63	SEG:seg	:

Description

hypothetical protein

Coordinates

chr2:-:76992033..76994387

Molecular Weight (calculated)

63962.7 Da

IEP (calculated)

6.452

GRAVY (calculated)

-0.439

Length

594 amino acids

Sequence
(BLAST)

001: MMAGGGGALM LDQRMAAAGD KALFGFGAGE CFFGEGDLVC PAPANEETMA MTFPLDEMMM MMSDDDADGI EELERRMWRD RVRLRRLKEQ QQQQISDRPS
101: AVKQEARGGS RQEQARRKKM SRAQDGILKY MLKMMEVCNA QGFVYGIIPE NGKPVTGASD NLRAWWKEKV RFDRNGPAAA AKYQADSAAT AAAGDGGGGM
201: APNALAGPHS LHELQDTTLG SLLSALMQHC DPPQRRFPLE KGRSPPWWPQ AAVPGELGPP PYKKPHDLKK AWKVAVLTAV IKHMSPDVDK ARRLVRQSKC
301: LQDKMTAREI VTWLAVLRQE EELYLQLHPG ARPAPSSAAT IPFCASSGEY DVDGADGEDT GRNHQPPSNA AASFVDLSSS AAAMDDDAGH TKFVMPAPAA
401: LMKEEAADAE FFQKRSAVEP ELMLGSSFRA YTCGNVRCPH SSGAHGFLDR NARNAHQYSC KFNNSAGAAA AALSGLDFDL PVDGQRSLAE LMDMYEANVG
501: GAPRSLVSNV NTAAPGVQVP GPYPTPCLFG DAISNVIQQG AAAFYVRDDA SPELRFGSGL NVAGGAAHYG GALQVQQQQP QPHKSTGSNA NWFY

Best Arabidopsis Sequence Match ( AT2G27050.1 )
(BLAST)

001: MMMFNEMGMY GNMDFFSSST SLDVCPLPQA EQEPVVEDVD YTDDEMDVDE LEKRMWRDKM RLKRLKEQQS KCKEGVDGSK QRQSQEQARR KKMSRAQDGI
101: LKYMLKMMEV CKAQGFVYGI IPEKGKPVTG ASDNLREWWK DKVRFDRNGP AAIAKYQSEN NISGGSNDCN SLVGPTPHTL QELQDTTLGS LLSALMQHCD
201: PPQRRFPLEK GVSPPWWPNG NEEWWPQLGL PNEQGPPPYK KPHDLKKAWK VGVLTAVIKH MSPDIAKIRK LVRQSKCLQD KMTAKESATW LAIINQEEVV
301: ARELYPESCP PLSSSSSLGS GSLLINDCSE YDVEGFEKEQ HGFDVEERKP EIVMMHPLAS FGVAKMQHFP IKEEVATTVN LEFTRKRKQN NDMNVMVMDR
401: SAGYTCENGQ CPHSKMNLGF QDRSSRDNHQ MVCPYRDNRL AYGASKFHMG GMKLVVPQQP VQPIDLSGVG VPENGQKMIT ELMAMYDRNV QSNQTPPTLM
501: ENQSMVIDAK AAQNQQLNFN SGNQMFMQQG TNNGVNNRFQ MVFDSTPFDM AAFDYRDDWQ TGAMEGMGKQ QQQQQQQQDV SIWF

Arabidopsis Description

EIL1ETHYLENE INSENSITIVE 3-like 1 protein [Source:UniProtKB/Swiss-Prot;Acc:Q9SLH0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.