CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU88707	Sorghum	nucleus, plastid	63.04	39.73
EES05301	Sorghum	nucleus	13.98	9.41
OQU80929	Sorghum	nucleus	16.77	8.74
EER94933	Sorghum	nucleus	17.39	8.71
KXG26452	Sorghum	nucleus	12.42	8.51
OQU90496	Sorghum	nucleus	14.91	8.08
EER99089	Sorghum	nucleus	14.29	7.55
KRH56267	Soybean	nucleus	16.77	7.05

Protein Annotations

Gene3D:1.10.3180.10	MapMan:11.5.2.4	UniProt:C5XPC8	EnsemblPlants:EES02452	ProteinID:EES02452	ProteinID:EES02452.2
InterPro:Ethylene_insens-like_DNA-bd	GO:GO:0003674	GO:GO:0003700	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	InterPro:IPR023278	PFAM:PF04873	PANTHER:PTHR33305	PANTHER:PTHR33305:SF8	EnsemblPlantsGene:SORBI_3003G068700
SUPFAM:SSF116768	UniParc:UPI00081AD723	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:5809983..5814702

Molecular Weight (calculated)

33716.8 Da

IEP (calculated)

6.420

GRAVY (calculated)

-0.171

Length

322 amino acids

Sequence
(BLAST)

001: MPVCNPPLRQ GQHQSKTGPP PPWWPTGSED WWTTELLEHL DLVAALSSAP VPVPFAPSYG LKKPQKVAVL VAIVKHLAPD FARIAAAVRH SGKLSISETD
101: LWHSALNNER AKYTRLVFIL LPQQQQQGGV GGGGGGGGGV STDPGAAGSV FAVHSGNAGA SDGCELQVAN LPAGGSVSAP ADGSRGEVVA AAELVVEKEQ
201: RSDSDGVGVV SATDAPAGDD GLDQPVNNFP AGDGSTDKLA WEEYGAGGRG NLAAREGTSR GRKLPMQSGA ARGSIRTRDV SFPTLEIYQI IVFGMCMLER
301: PSILAYHFFL LNPHSISVRH FF

Best Arabidopsis Sequence Match ( AT1G73730.1 )
(BLAST)

001: MGDLAMSVAD IRMENEPDDL ASDNVAEIDV SDEEIDADDL ERRMWKDRVR LKRIKERQKA GSQGAQTKET PKKISDQAQR KKMSRAQDGI LKYMLKLMEV
101: CKVRGFVYGI IPEKGKPVSG SSDNIRAWWK EKVKFDKNGP AAIAKYEEEC LAFGKSDGNR NSQFVLQDLQ DATLGSLLSS LMQHCDPPQR KYPLEKGTPP
201: PWWPTGNEEW WVKLGLPKSQ SPPYRKPHDL KKMWKVGVLT AVINHMLPDI AKIKRHVRQS KCLQDKMTAK ESAIWLAVLN QEESLIQQPS SDNGNSNVTE
301: THRRGNNADR RKPVVNSDSD YDVDGTEEAS GSVSSKDSRR NQIQKEQPTA ISHSVRDQDK AEKHRRRKRP RIRSGTVNRQ EEEQPEAQQR NILPDMNHVD
401: APLLEYNING THQEDDVVDP NIALGPEDNG LELVVPEFNN NYTYLPLVNE QTMMPVDERP MLYGPNPNQE LQFGSGYNFY NPSAVFVHNQ EDDILHTQIE
501: MNTQAPPHNS GFEEAPGGVL QPLGLLGNED GVTGSELPQY QSGILSPLTD LDFDYGGFGD DFSWFGA

Arabidopsis Description

EIL3SLIM1 [Source:UniProtKB/TrEMBL;Acc:A0A178VZZ3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.