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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, nucleus

Predictor Summary:
  • nucleus 4
  • plastid 4
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EES02452 Sorghum nucleus 39.73 63.04
EES05301 Sorghum nucleus 14.48 15.48
KXG26452 Sorghum nucleus 12.52 13.62
EER99089 Sorghum nucleus 15.07 12.64
OQU80929 Sorghum nucleus 15.07 12.46
OQU90496 Sorghum nucleus 14.29 12.29
EER94933 Sorghum nucleus 15.46 12.29
KRH56267 Soybean nucleus 14.48 9.66
Protein Annotations
Gene3D:1.10.3180.10MapMan:11.5.2.4UniProt:A0A1W0W2V6InterPro:Ethylene_insens-like_DNA-bdGO:GO:0003674GO:GO:0003700
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0006139GO:GO:0006355
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987InterPro:IPR023278EnsemblPlants:OQU88707
ProteinID:OQU88707ProteinID:OQU88707.1PFAM:PF04873PANTHER:PTHR33305PANTHER:PTHR33305:SF8EnsemblPlantsGene:SORBI_3002G078850
SUPFAM:SSF116768UniParc:UPI0009DC8683SEG:seg:::
Description
hypothetical protein
Coordinates
chr2:+:8204439..8206181
Molecular Weight (calculated)
52202.3 Da
IEP (calculated)
4.810
GRAVY (calculated)
-0.165
Length
511 amino acids
Sequence
(BLAST)
001: MAGKSSNLGA SASSSSSTKM VKPQQEKRKQ LATRAEQAKK QRPFQLINFP ARTRGSGTAT PVVVPPLHRG ASNNMATPAF PFPMPGVNGA APLWSTAAML
101: GAASRAAALT LSSLPATASA NGPAAAPFVV APAPGLQPTP AGAAASNAAA ALALAAGASS ATCVSPPLVL AAVGLPPPAV GIPLAAALGK IENGALGRMI
201: SSLMPVCNPP LRQGQHHQSK TGPPPPWWPT GSEDWWATEL LEHLDSVAAL SSAPVPVPFA PSYGLKKPQK VAVLVAIVKH LAPDFARIAS AVRHSGKLSI
301: SETDLWHSAL NNERAKYTRP VFILLPQQQQ QQGGSVSAPA DGSRGEVVAA AELVVEKELR SDSDGDGDGV GVGVGVGVGV VSATDAPAGD DGLDQPVNNF
401: PAGDGSTDKQ GAAVAAAPTT GHVRQEVEGG PVPEMTMQPP EQDGGVPGDE VAAAAAEDED EDEQVHPVVA PNPNAVAAIE EAPEDRHWWW CDNDELLNRM
501: FGESESFGDD V
Best Arabidopsis Sequence Match ( AT1G73730.2 )
(BLAST)
001: MENEPDDLAS DNVAEIDVSD EEIDADDLER RMWKDRVRLK RIKERQKAGS QGAQTKETPK KISDQAQRKK MSRAQDGILK YMLKLMEVCK VRGFVYGIIP
101: EKGKPVSGSS DNIRAWWKEK VKFDKNGPAA IAKYEEECLA FGKSDGNRNS QFVLQDLQDA TLGSLLSSLM QHCDPPQRKY PLEKGTPPPW WPTGNEEWWV
201: KLGLPKSQSP PYRKPHDLKK MWKVGVLTAV INHMLPDIAK IKRHVRQSKC LQDKMTAKES AIWLAVLNQE ESLIQQPSSD NGNSNVTETH RRGNNADRRK
301: PVVNSDSDYD VDGTEEASGS VSSKDSRRNQ IQKEQPTAIS HSVRDQDKAE KHRRRKRPRI RSGTVNRQEE EQPEAQQRNI LPDMNHVDAP LLEYNINGTH
401: QEDDVVDPNI ALGPEDNGLE LVVPEFNNNY TYLPLVNEQT MMPVDERPML YGPNPNQELQ FGSGYNFYNP SAVFVHNQED DILHTQIEMN TQAPPHNSGF
501: EEAPGGVLQP LGLLGNEDGV TGSELPQYQS GILSPLTDLD FDYGGFGDDF SWFGA
Arabidopsis Description
EIL3SLIM1 [Source:UniProtKB/TrEMBL;Acc:A0A178VZZ3]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.