Factsheet for Bra023927.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra009835.1-P
Bra034254.1-P
Bra036542.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G20770.1	Bra034254.1-P	AT2G25490.1	14675532
AT3G20770.1	Bra034254.1-P	AT2G25490.1	14675533
AT3G20770.1	Bra009835.1-P	AT5G25350.1	14675532
AT3G20770.1	Bra036542.1-P	AT5G25350.1	14675532
AT3G20770.1	Bra009835.1-P	AT5G25350.1	14675533
AT3G20770.1	Bra036542.1-P	AT5G25350.1	14675533

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY60391	Canola	nucleus	94.81	98.82
Bra035746.1-P	Field mustard	nucleus	82.17	74.29
Bra001802.1-P	Field mustard	nucleus	78.33	59.72
AT3G20770.1	Thale cress	nucleus	83.52	58.92
Bra000528.1-P	Field mustard	nucleus	57.56	44.66
Bra014281.1-P	Field mustard	nucleus	16.03	42.26
KRG89856	Soybean	nucleus	57.79	41.03
KRH18695	Soybean	nucleus	56.88	40.58
KRH18696	Soybean	nucleus	53.27	38.19
KRH73465	Soybean	nucleus	52.37	37.78
KRH14682	Soybean	nucleus	51.69	37.54
PGSC0003DMT400022477	Potato	nucleus	51.69	37.3
Solyc06g073720.1.1	Tomato	nucleus	51.24	37.21
VIT_06s0009g01380.t01	Wine grape	nucleus	51.02	37.05
Solyc01g009170.2.1	Tomato	nucleus	50.79	36.65
PGSC0003DMT400015148	Potato	nucleus	50.34	36.56
Solyc06g073730.1.1	Tomato	nucleus	47.63	34.88
PGSC0003DMT400015145	Potato	nucleus	46.05	34.06
GSMUA_Achr6P15930_001	Banana	nucleus	36.12	30.89
Os02t0689132-00	Rice	nucleus	12.19	30.51
GSMUA_Achr10P...	Banana	nucleus	35.44	30.08
Bra020146.1-P	Field mustard	nucleus	25.28	28.87
GSMUA_Achr5P27670_001	Banana	nucleus	40.41	28.55
GSMUA_Achr2P11540_001	Banana	nucleus	38.83	28.48
GSMUA_Achr8P21550_001	Banana	nucleus	40.63	28.39
GSMUA_Achr9P17080_001	Banana	nucleus	39.5	28.14
GSMUA_Achr11P...	Banana	nucleus	36.57	27.36
TraesCS4B01G175100.1	Wheat	nucleus	39.73	27.08
EER94933	Sorghum	nucleus	39.05	26.91
TraesCS4A01G129400.1	Wheat	nucleus	33.18	26.87
GSMUA_Achr3P09440_001	Banana	nucleus	32.05	26.84
HORVU4Hr1G051680.1	Barley	nucleus	39.28	26.73
TraesCS4D01G177000.1	Wheat	nucleus	39.28	26.73
Zm00001d047563_P001	Maize	nucleus	38.6	26.64
Zm00001d028974_P001	Maize	nucleus	38.83	26.58
Zm00001d007188_P001	Maize	nucleus	35.21	26.22
Bra024354.1-P	Field mustard	nucleus	20.77	25.92
OQU90496	Sorghum	nucleus	33.41	24.92
TraesCS2A01G099900.1	Wheat	nucleus	34.09	24.43
TraesCS2D01G099400.1	Wheat	nucleus	34.09	24.35
TraesCS2B01G116900.1	Wheat	nucleus	33.18	23.75
Bra006050.1-P	Field mustard	nucleus	16.93	22.8
Bra002358.1-P	Field mustard	nucleus	24.61	21.37
Bra003831.1-P	Field mustard	nucleus	26.41	21.2
Bra008110.1-P	Field mustard	nucleus	25.73	21.15
Zm00001d022530_P001	Maize	nucleus	21.44	20.93
Bra028601.1-P	Field mustard	nucleus	19.86	19.34
Bra015970.1-P	Field mustard	nucleus	24.83	18.74

Protein Annotations

MapMan:11.5.2.4	MapMan:15.5.11	EnsemblPlantsGene:Bra023927	EnsemblPlants:Bra023927.1	EnsemblPlants:Bra023927.1-P	ncoils:Coil
GO:GO:0003674	GO:GO:0003700	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
UniProt:M4E573	PFAM:PF04873	PANTHER:PTHR33305	PANTHER:PTHR33305:SF1	UniParc:UPI000254472B	SEG:seg

Description

AT3G20770 (E=6e-090) EIN3 | EIN3 (ETHYLENE-INSENSITIVE3); transcription factor

Coordinates

chrA01:+:21101482..21103299

Molecular Weight (calculated)

50572.0 Da

IEP (calculated)

4.672

GRAVY (calculated)

-0.816

Length

443 amino acids

Sequence
(BLAST)

001: MFNEMGMLGG NMDLYSSSSL GELDFCPAPH PEPDSIVEDD YTDDDEIDVD ELERRMWRDK MRLKRLKEQD NKSSKQGVDY DSAKQRQSQE QARRKKMSRA
101: QDGILKYMLK MMEVCKAQGF VYGIIPENGK PVTGASDNLR EWWKDKVRFD RNGPAAISGG SCSLLMNDCD QYDVEGFEKE TRYEVEEVKP VKEEVSSEFM
201: RKRKPDRDLN AIMDRTVFFT CENPGCVHSE ISRGFLDRSS RDNHQLGCLH RGSCLPYGAA GPSRFHVNEV KPVVGFSQPW PVNSVDQPID LTGIGVPEDG
301: QKMISELMSM YDRNVQSNQT SMVVENQNVT LLQPMVQNQF QGNIVEGSFF EEFNIPNRAN NSNNNNQMFF QGNNINGFNY DTTHNNNFEA AQNNSRSNRF
401: QDVYDSAPFD MASFVYRDDM SMPGAAGTMD GMHQKQHDAS LWF

Best Arabidopsis Sequence Match ( AT3G20770.1 )
(BLAST)

001: MMFNEMGMCG NMDFFSSGSL GEVDFCPVPQ AEPDSIVEDD YTDDEIDVDE LERRMWRDKM RLKRLKEQDK GKEGVDAAKQ RQSQEQARRK KMSRAQDGIL
101: KYMLKMMEVC KAQGFVYGII PENGKPVTGA SDNLREWWKD KVRFDRNGPA AITKYQAENN IPGIHEGNNP IGPTPHTLQE LQDTTLGSLL SALMQHCDPP
201: QRRFPLEKGV PPPWWPNGKE DWWPQLGLPK DQGPAPYKKP HDLKKAWKVG VLTAVIKHMF PDIAKIRKLV RQSKCLQDKM TAKESATWLA IINQEESLAR
301: ELYPESCPPL SLSGGSCSLL MNDCSQYDVE GFEKESHYEV EELKPEKVMN SSNFGMVAKM HDFPVKEEVP AGNSEFMRKR KPNRDLNTIM DRTVFTCENL
401: GCAHSEISRG FLDRNSRDNH QLACPHRDSR LPYGAAPSRF HVNEVKPVVG FPQPRPVNSV AQPIDLTGIV PEDGQKMISE LMSMYDRNVQ SNQTSMVMEN
501: QSVSLLQPTV HNHQEHLQFP GNMVEGSFFE DLNIPNRANN NNSSNNQTFF QGNNNNNNVF KFDTADHNNF EAAHNNNNNS SGNRFQLVFD STPFDMASFD
601: YRDDMSMPGV VGTMDGMQQK QQDVSIWF

Arabidopsis Description

EIN3Protein ETHYLENE INSENSITIVE 3 [Source:UniProtKB/Swiss-Prot;Acc:O24606]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.