Factsheet for Zm00001d028974_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d000408_P001
Zm00001d015778_P001
Zm00001d036880_P003
Zm00001d053642_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G27050.1	Zm00001d000408_P001	AT2G25490.1	14675533
AT2G27050.1	Zm00001d015778_P001	AT2G25490.1	14675533
AT2G27050.1	Zm00001d036880_P003	AT2G25490.1	14675533
AT2G27050.1	Zm00001d053642_P001	AT2G25490.1	14675533
AT2G27050.1	Zm00001d000408_P001	AT5G25350.1	14675533
AT2G27050.1	Zm00001d015778_P001	AT5G25350.1	14675533
AT2G27050.1	Zm00001d036880_P003	AT5G25350.1	14675533
AT2G27050.1	Zm00001d053642_P001	AT5G25350.1	14675533
AT3G20770.1	Zm00001d000408_P001	AT2G25490.1	14675532
AT3G20770.1	Zm00001d015778_P001	AT2G25490.1	14675532
AT3G20770.1	Zm00001d036880_P003	AT2G25490.1	14675532
AT3G20770.1	Zm00001d053642_P001	AT2G25490.1	14675532
AT3G20770.1	Zm00001d000408_P001	AT2G25490.1	14675533
AT3G20770.1	Zm00001d015778_P001	AT2G25490.1	14675533
AT3G20770.1	Zm00001d036880_P003	AT2G25490.1	14675533
AT3G20770.1	Zm00001d053642_P001	AT2G25490.1	14675533
AT3G20770.1	Zm00001d000408_P001	AT5G25350.1	14675532
AT3G20770.1	Zm00001d015778_P001	AT5G25350.1	14675532
AT3G20770.1	Zm00001d036880_P003	AT5G25350.1	14675532
AT3G20770.1	Zm00001d053642_P001	AT5G25350.1	14675532
AT3G20770.1	Zm00001d000408_P001	AT5G25350.1	14675533
AT3G20770.1	Zm00001d015778_P001	AT5G25350.1	14675533
AT3G20770.1	Zm00001d036880_P003	AT5G25350.1	14675533
AT3G20770.1	Zm00001d053642_P001	AT5G25350.1	14675533

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER94933	Sorghum	nucleus	93.51	94.09
Zm00001d047563_P001	Maize	nucleus	91.19	91.9
TraesCS4A01G129400.1	Wheat	nucleus	71.56	84.64
Os03t0324300-02	Rice	nucleus	82.38	83.15
Os03t0324200-01	Rice	nucleus	82.07	82.45
TraesCS4D01G177000.1	Wheat	nucleus	82.07	81.57
TraesCS4B01G175100.1	Wheat	nucleus	81.61	81.23
HORVU4Hr1G051680.1	Barley	nucleus	81.61	81.11
GSMUA_Achr6P15930_001	Banana	nucleus	53.63	66.99
GSMUA_Achr10P...	Banana	nucleus	52.86	65.52
GSMUA_Achr5P27670_001	Banana	nucleus	56.26	58.05
GSMUA_Achr2P11540_001	Banana	nucleus	53.79	57.62
GSMUA_Achr3P09440_001	Banana	nucleus	46.21	56.52
GSMUA_Achr9P17080_001	Banana	nucleus	53.48	55.63
GSMUA_Achr8P21550_001	Banana	nucleus	54.25	55.36
Zm00001d022530_P001	Maize	nucleus	38.49	54.85
Zm00001d007188_P001	Maize	nucleus	50.23	54.62
GSMUA_Achr11P...	Banana	nucleus	49.77	54.39
CDX82228	Canola	nucleus	43.59	52.13
CDY32390	Canola	nucleus	44.2	52.09
VIT_13s0047g00250.t01	Wine grape	nucleus	48.84	51.3
Bra001802.1-P	Field mustard	nucleus	45.13	50.26
CDY38540	Canola	nucleus	43.59	50.09
KRH14682	Soybean	nucleus	47.14	50.0
CDX83250	Canola	nucleus	43.74	49.65
Bra000528.1-P	Field mustard	nucleus	43.59	49.39
KRH73465	Soybean	nucleus	46.68	49.19
KRG89856	Soybean	nucleus	47.3	49.04
KRH18695	Soybean	nucleus	46.99	48.95
CDY27563	Canola	nucleus	44.36	48.89
AT2G27050.1	Thale cress	nucleus	44.05	48.8
KRH18696	Soybean	nucleus	45.6	47.73
AT3G20770.1	Thale cress	nucleus	46.06	47.45
Solyc01g096810.2.1	Tomato	nucleus	43.74	47.09
PGSC0003DMT400070751	Potato	nucleus	42.97	46.49
CDY19606	Canola	nucleus	29.37	41.3
CDY06379	Canola	nucleus	30.6	40.66
CDY60391	Canola	nucleus	26.58	40.47
Bra035746.1-P	Field mustard	nucleus	30.6	40.41
Bra023927.1-P	Field mustard	nucleus	26.58	38.83
Zm00001d020939_P001	Maize	nucleus	33.54	35.63
Zm00001d016924_P001	Maize	nucleus	23.49	35.43
Zm00001d031445_P001	Maize	nucleus	34.47	35.28
Zm00001d050861_P001	Maize	nucleus	23.8	34.92
Zm00001d003451_P001	Maize	nucleus	24.27	29.51

Protein Annotations

Gene3D:1.10.3180.10	EntrezGene:100285672	MapMan:11.5.2.4	MapMan:15.5.11	EMBL:BT062967	EMBL:BT063454
UniProt:C0P3U8	ncoils:Coil	InterPro:Ethylene_insens-like_DNA-bd	GO:GO:0003674	GO:GO:0003700	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EMBL:HQ858663	InterPro:IPR023278	ProteinID:ONL97523.1
PFAM:PF04873	PANTHER:PTHR33305	PANTHER:PTHR33305:SF11	SUPFAM:SSF116768	UniParc:UPI0000037252	EnsemblPlantsGene:Zm00001d028974
EnsemblPlants:Zm00001d028974_P001	EnsemblPlants:Zm00001d028974_T001	SEG:seg	:	:	:

Description

ethylene insensitive-like3 ethylene insensitive-like3

Coordinates

chr1:+:53368438..53370381

Molecular Weight (calculated)

72038.9 Da

IEP (calculated)

4.821

GRAVY (calculated)

-0.689

Length

647 amino acids

Sequence
(BLAST)

001: MMGGGLMMDQ SVVFPGVHNF VDLLQQNGDK NLGFASLMPQ TSSGDQCVMG EGDLVDPPPD SFPDAVEDDS DDDVEDIEEL ERRMWRDRMK LKRLRELQQS
101: RGKDPMASGG GLADGSSKPR QSQEQARRKK MSRAQDGILK YMLKMMEVCR AQGFVYGIIP EKGKPVSGAS DNLRAWWKEK VRFDRNGPAA IAKYQADNAV
201: PGAENELASG AASPHSLQEL QDTTLGSLLS ALMQHCDPPQ RRYPLEKGVP PPWWPTGDEE WWPELGIPKD QGPPPYKKPH DLKKAWKVSV LTAVIKHMSP
301: DIEKIRRLVR QSKCLQDKMT AKEISTWLAV VKQEEELYLK MHPGARPPAS TGGIASAISF NTTSSEYDVD IVDECKGDEA GNQKTAVTDP TSFNLGAAIL
401: SDKFLMPTPM KEETADVEFI QKRNAPAPAE PELMLNNRVY TCNNVQCPHS DYSYGFLDRN ARNSHQYTCK YNDPITQSAE NKPLPAPPQP QAFQPAFSQA
501: NQAANNLDFS LPMDGQRSIA ELMNMYDTNF MTSKTMSSSD SVTIMERPNA MPQRIQMDEG FFGQGNGVFD DVNSMMQQQQ QQAPPVVQQQ QQQQFFIRDD
601: TPFMSQMGDI TSTAEFRFGS GFNMSSTAAA ADYPGAAQKN DGTNWFY

Best Arabidopsis Sequence Match ( AT3G20770.1 )
(BLAST)

001: MMFNEMGMCG NMDFFSSGSL GEVDFCPVPQ AEPDSIVEDD YTDDEIDVDE LERRMWRDKM RLKRLKEQDK GKEGVDAAKQ RQSQEQARRK KMSRAQDGIL
101: KYMLKMMEVC KAQGFVYGII PENGKPVTGA SDNLREWWKD KVRFDRNGPA AITKYQAENN IPGIHEGNNP IGPTPHTLQE LQDTTLGSLL SALMQHCDPP
201: QRRFPLEKGV PPPWWPNGKE DWWPQLGLPK DQGPAPYKKP HDLKKAWKVG VLTAVIKHMF PDIAKIRKLV RQSKCLQDKM TAKESATWLA IINQEESLAR
301: ELYPESCPPL SLSGGSCSLL MNDCSQYDVE GFEKESHYEV EELKPEKVMN SSNFGMVAKM HDFPVKEEVP AGNSEFMRKR KPNRDLNTIM DRTVFTCENL
401: GCAHSEISRG FLDRNSRDNH QLACPHRDSR LPYGAAPSRF HVNEVKPVVG FPQPRPVNSV AQPIDLTGIV PEDGQKMISE LMSMYDRNVQ SNQTSMVMEN
501: QSVSLLQPTV HNHQEHLQFP GNMVEGSFFE DLNIPNRANN NNSSNNQTFF QGNNNNNNVF KFDTADHNNF EAAHNNNNNS SGNRFQLVFD STPFDMASFD
601: YRDDMSMPGV VGTMDGMQQK QQDVSIWF

Arabidopsis Description

EIN3Protein ETHYLENE INSENSITIVE 3 [Source:UniProtKB/Swiss-Prot;Acc:O24606]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.