Factsheet for GSMUA_Achr3P09440_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr2P15920_001
GSMUA_Achr4P30680_001
GSMUA_Achr6P05220_001
GSMUA_Achr9P28510_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G27050.1	GSMUA_Achr10P...	AT2G25490.1	14675533
AT2G27050.1	GSMUA_Achr2P15920_001	AT2G25490.1	14675533
AT2G27050.1	GSMUA_Achr4P30680_001	AT2G25490.1	14675533
AT2G27050.1	GSMUA_Achr6P05220_001	AT2G25490.1	14675533
AT2G27050.1	GSMUA_Achr9P28510_001	AT2G25490.1	14675533
AT2G27050.1	GSMUA_Achr10P...	AT5G25350.1	14675533
AT2G27050.1	GSMUA_Achr2P15920_001	AT5G25350.1	14675533
AT2G27050.1	GSMUA_Achr4P30680_001	AT5G25350.1	14675533
AT2G27050.1	GSMUA_Achr6P05220_001	AT5G25350.1	14675533
AT2G27050.1	GSMUA_Achr9P28510_001	AT5G25350.1	14675533
AT3G20770.1	GSMUA_Achr10P...	AT2G25490.1	14675532
AT3G20770.1	GSMUA_Achr2P15920_001	AT2G25490.1	14675532
AT3G20770.1	GSMUA_Achr4P30680_001	AT2G25490.1	14675532
AT3G20770.1	GSMUA_Achr6P05220_001	AT2G25490.1	14675532
AT3G20770.1	GSMUA_Achr9P28510_001	AT2G25490.1	14675532
AT3G20770.1	GSMUA_Achr10P...	AT2G25490.1	14675533
AT3G20770.1	GSMUA_Achr2P15920_001	AT2G25490.1	14675533
AT3G20770.1	GSMUA_Achr4P30680_001	AT2G25490.1	14675533
AT3G20770.1	GSMUA_Achr6P05220_001	AT2G25490.1	14675533
AT3G20770.1	GSMUA_Achr9P28510_001	AT2G25490.1	14675533
AT3G20770.1	GSMUA_Achr10P...	AT5G25350.1	14675532
AT3G20770.1	GSMUA_Achr2P15920_001	AT5G25350.1	14675532
AT3G20770.1	GSMUA_Achr4P30680_001	AT5G25350.1	14675532
AT3G20770.1	GSMUA_Achr6P05220_001	AT5G25350.1	14675532
AT3G20770.1	GSMUA_Achr9P28510_001	AT5G25350.1	14675532
AT3G20770.1	GSMUA_Achr10P...	AT5G25350.1	14675533
AT3G20770.1	GSMUA_Achr2P15920_001	AT5G25350.1	14675533
AT3G20770.1	GSMUA_Achr4P30680_001	AT5G25350.1	14675533
AT3G20770.1	GSMUA_Achr6P05220_001	AT5G25350.1	14675533
AT3G20770.1	GSMUA_Achr9P28510_001	AT5G25350.1	14675533

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	nucleus	66.54	67.43
GSMUA_Achr6P15930_001	Banana	nucleus	63.52	64.86
GSMUA_Achr9P17080_001	Banana	nucleus	68.81	58.52
GSMUA_Achr8P21550_001	Banana	nucleus	68.81	57.41
GSMUA_Achr2P11540_001	Banana	nucleus	64.27	56.29
GSMUA_Achr5P27670_001	Banana	nucleus	62.19	52.47
TraesCS4A01G129400.1	Wheat	nucleus	53.31	51.55
GSMUA_Achr11P...	Banana	nucleus	55.95	50.0
Os03t0324300-02	Rice	nucleus	57.28	47.27
EER94933	Sorghum	nucleus	57.09	46.97
Os03t0324200-01	Rice	nucleus	56.9	46.74
Zm00001d028974_P001	Maize	nucleus	56.52	46.21
CDY32390	Canola	nucleus	47.83	46.08
TraesCS4D01G177000.1	Wheat	nucleus	56.71	46.08
Zm00001d047563_P001	Maize	nucleus	55.77	45.95
TraesCS4B01G175100.1	Wheat	nucleus	56.33	45.85
HORVU4Hr1G051680.1	Barley	nucleus	56.14	45.62
CDX82228	Canola	nucleus	46.5	45.47
KRH14682	Soybean	nucleus	52.36	45.41
KRH73465	Soybean	nucleus	52.36	45.11
Os07t0685700-01	Rice	mitochondrion, nucleus	50.47	45.03
VIT_13s0047g00250.t01	Wine grape	nucleus	52.17	44.81
KRH18695	Soybean	nucleus	52.55	44.77
Zm00001d022530_P001	Maize	nucleus	37.62	43.83
OQU90496	Sorghum	nucleus	48.77	43.43
KRG89856	Soybean	nucleus	51.23	43.43
Zm00001d007188_P001	Maize	nucleus	48.77	43.36
CDY38540	Canola	nucleus	46.12	43.34
AT2G27050.1	Thale cress	nucleus	47.64	43.15
Bra000528.1-P	Field mustard	nucleus	46.5	43.08
TraesCS2A01G099900.1	Wheat	nucleus	50.28	43.04
KRH18696	Soybean	nucleus	50.28	43.04
CDX83250	Canola	nucleus	46.31	42.98
Bra001802.1-P	Field mustard	nucleus	47.07	42.86
Solyc01g096810.2.1	Tomato	nucleus	48.39	42.6
CDY27563	Canola	nucleus	47.26	42.59
TraesCS2B01G116900.1	Wheat	nucleus	49.72	42.49
TraesCS2D01G099400.1	Wheat	nucleus	49.72	42.42
GSMUA_Achr10P...	Banana	nucleus	26.84	42.14
PGSC0003DMT400070751	Potato	nucleus	47.26	41.81
AT3G20770.1	Thale cress	nucleus	47.64	40.13
CDY06379	Canola	nucleus	31.19	33.88
CDY19606	Canola	nucleus	29.3	33.7
GSMUA_AchrUn_...	Banana	nucleus	27.22	33.18
CDY60391	Canola	nucleus	26.46	32.94
GSMUA_Achr8P17130_001	Banana	nucleus	33.46	32.36
GSMUA_Achr3P11160_001	Banana	nucleus	34.78	32.22
GSMUA_Achr7P21630_001	Banana	nucleus	39.7	32.06
Bra023927.1-P	Field mustard	nucleus	26.84	32.05
Bra035746.1-P	Field mustard	nucleus	29.68	32.04
GSMUA_Achr6P23310_001	Banana	nucleus	33.08	31.76
GSMUA_Achr9P27680_001	Banana	nucleus	36.48	31.64
GSMUA_Achr8P25580_001	Banana	nucleus	35.92	30.84

Protein Annotations

Gene3D:1.10.3180.10	MapMan:11.5.2.4	MapMan:15.5.11	ncoils:Coil	InterPro:Ethylene_insens-like_DNA-bd	GO:GO:0003674
GO:GO:0003700	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr3G09440_001
EnsemblPlants:GSMUA_Achr3P09440_001	EnsemblPlants:GSMUA_Achr3T09440_001	InterPro:IPR023278	UniProt:M0SD61	PFAM:PF04873	PANTHER:PTHR33305
PANTHER:PTHR33305:SF1	SUPFAM:SSF116768	UniParc:UPI000296B32F	SEG:seg	:	:

Description

ethylene-insensitive 3, putative [Source:GMGC_GENE;Acc:GSMUA_Achr3G09440_001]

Coordinates

chr3:+:6823792..6825522

Molecular Weight (calculated)

59956.9 Da

IEP (calculated)

6.637

GRAVY (calculated)

-0.788

Length

529 amino acids

Sequence
(BLAST)

001: MMGGLSMEDI VCRTRPNQVQ NLPSMDEKNF IYGSLHQPER NGQGDPTEPP QEKLAEANDE ENDEDIDIEE LEHRVWKDRM RLKRLKEQQQ HKHKELQGEA
101: SKQRQSQEQA RRKKMCRAQD GILKNMLKLM EVCNAQGFVY GILLENGKPV SGASDNLRAW WKEKVRFDWN GPAAIAKYQA DTAISRSSSE LYSETASLRS
201: LQELQDTTLG SLLSALMQHC NPPQRRFPLE KGIAPPWWPT GNEEWWQQPG IPNDQGPPPY KKPHDLKKAW KVCVLTSVIK HISPNMDKIH RLVRQSKCLQ
301: DKMTAKESAT WLAVIKQEED MYRKLHPDAC IPPSSCSGIT GNNMEIIRKR SVAEAEPVLN QCIYTCANVQ CPHNDLRHGF LDRNARNSHQ YHCQYQNTLP
401: QGIGAAFNTQ PNLTSLISGL DPIDISDLGI PPDAQKSIND LMSYYDHNLN DTKSFSSGGI PPLQQQQQQF SLHEDAMPFE QQLGNQSNGM GGEFGFASAF
501: IAPTMDHAGA LHGKMEDPLH KAEASHWFY

Best Arabidopsis Sequence Match ( AT5G10120.1 )
(BLAST)

001: MVEVEELEPL SPMDDEEEEI SYDDLKRRMW KDRNLMEKKL KQQKRHSNDV VSFTTHRAEA SRRKKMARSQ DSVLKYMMKI MEVCKAKGFV YGIVPEKGKP
101: ITGSSDSLRR WWKENVQFDQ NAPDAITDYL ALAAAAAAAE LIDKSSSSSS LLHMLQELQD TTLGSLLSAL MQHCMPPQRR FPLEKGIAPP WWPTGTELWW
201: GEQGAAHEHG APPYRKPHDL RKSWKVSVLA AVIKHMSPNL GRVRRLARQS KSLQDKMMAK ETDTWSRVLN QEEALLNIKD LKISEDQDDQ ESSGSKRKSE
301: SMEPSKSVYT CQNSSCPKSD VSFGFGDKNS RTGHEIQCLY GSNQEPSQSG EYTSSLLETV PSIVTNSTSE DDYYNVSSRA LDKRDDDDHS INGNWMEYFW
401: LEKMQQEFHC SRRFEDDEGT GTDFDQLTES DRSDNVNLNQ LTKSDRSDNV NRSAFSVWDM GCEDKDIYMF D

Arabidopsis Description

EIL4Putative ETHYLENE INSENSITIVE 3-like 4 protein [Source:UniProtKB/Swiss-Prot;Acc:Q9LX16]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.