Factsheet for GSMUA_AchrUn_randomP19800_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P17130_001	Banana	nucleus	85.25	67.64
GSMUA_Achr6P23310_001	Banana	nucleus	81.34	64.07
GSMUA_Achr10P...	Banana	nucleus	25.81	33.23
GSMUA_Achr6P15930_001	Banana	nucleus	36.87	30.89
GSMUA_Achr10P...	Banana	nucleus	36.18	30.08
GSMUA_Achr3P09440_001	Banana	nucleus	33.18	27.22
GSMUA_Achr2P11540_001	Banana	nucleus	36.18	25.99
GSMUA_Achr5P27670_001	Banana	nucleus	36.64	25.36
GSMUA_Achr9P17080_001	Banana	nucleus	35.71	24.92
GSMUA_Achr11P...	Banana	nucleus	33.18	24.32
GSMUA_Achr8P21550_001	Banana	nucleus	35.25	24.13
GSMUA_Achr3P11160_001	Banana	nucleus	31.57	23.99
GSMUA_Achr7P21630_001	Banana	nucleus	34.1	22.6
GSMUA_Achr9P27680_001	Banana	nucleus	31.34	22.3
GSMUA_Achr8P25580_001	Banana	nucleus	29.26	20.62

Protein Annotations

Gene3D:1.10.3180.10	MapMan:11.5.2.4	MapMan:15.5.11	InterPro:Ethylene_insens-like_DNA-bd	GO:GO:0003674	GO:GO:0003700
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSMUA_AchrUn_randomG19800_001	EnsemblPlants:GSMUA_AchrUn_randomP19800_001
EnsemblPlants:GSMUA_AchrUn_randomT19800_001	InterPro:IPR023278	UniProt:M0UAN9	PFAM:PF04873	PANTHER:PTHR33305	PANTHER:PTHR33305:SF1
SUPFAM:SSF116768	UniParc:UPI0002948340	SEG:seg	:	:	:

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG19800_001]

Coordinates

chrchrUn_random:+:95887473..95888777

Molecular Weight (calculated)

48794.5 Da

IEP (calculated)

5.415

GRAVY (calculated)

-0.585

Length

434 amino acids

Sequence
(BLAST)

001: MLELVEEGLA QGFIYGIVPY KGKPVSGVSN NLRKWWKETV RFDRNGPAAI STYQRDSCTH VISKENTSEF SVPDALQELQ DTTLGSLLSA LMPYCDPPQR
101: RFPLEKGIPP PWWPNMSEEW WREMGVPKDP SPPPYKKPHD LKKAWKVSVL IAVIKHLMPD IEKIQRLIEK SKGLQDKITA REVDILNAVL RHELKKYFGH
201: QHNSPPPPPS MVGQSCREAV GDASTSRIDE QPISEAMQEE SMNVTQYLAM DVNMFTRPNL PSYELGPQDQ SRGSIHQDKF GHIHHCVASA SHGNQPLANP
301: YGPCVPVAAD SPVLPSGGIE MRHQGTSSSD MHLFQTRLNQ DHAPLPEVMK VEIDPLFSSS VQEDETGTSI TRELANLMQP QIFPSDETAS FESIFGHNFD
401: IGPASYFSTT DQSSRIPYSF HELDEYDWSK DFGN

Best Arabidopsis Sequence Match ( AT1G73730.1 )
(BLAST)

001: MGDLAMSVAD IRMENEPDDL ASDNVAEIDV SDEEIDADDL ERRMWKDRVR LKRIKERQKA GSQGAQTKET PKKISDQAQR KKMSRAQDGI LKYMLKLMEV
101: CKVRGFVYGI IPEKGKPVSG SSDNIRAWWK EKVKFDKNGP AAIAKYEEEC LAFGKSDGNR NSQFVLQDLQ DATLGSLLSS LMQHCDPPQR KYPLEKGTPP
201: PWWPTGNEEW WVKLGLPKSQ SPPYRKPHDL KKMWKVGVLT AVINHMLPDI AKIKRHVRQS KCLQDKMTAK ESAIWLAVLN QEESLIQQPS SDNGNSNVTE
301: THRRGNNADR RKPVVNSDSD YDVDGTEEAS GSVSSKDSRR NQIQKEQPTA ISHSVRDQDK AEKHRRRKRP RIRSGTVNRQ EEEQPEAQQR NILPDMNHVD
401: APLLEYNING THQEDDVVDP NIALGPEDNG LELVVPEFNN NYTYLPLVNE QTMMPVDERP MLYGPNPNQE LQFGSGYNFY NPSAVFVHNQ EDDILHTQIE
501: MNTQAPPHNS GFEEAPGGVL QPLGLLGNED GVTGSELPQY QSGILSPLTD LDFDYGGFGD DFSWFGA

Arabidopsis Description

EIL3SLIM1 [Source:UniProtKB/TrEMBL;Acc:A0A178VZZ3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.