Factsheet for GSMUA_Achr10P12800_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr2P15920_001
GSMUA_Achr4P30680_001
GSMUA_Achr6P05220_001
GSMUA_Achr9P28510_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G27050.1	GSMUA_Achr10P...	AT2G25490.1	14675533
AT2G27050.1	GSMUA_Achr2P15920_001	AT2G25490.1	14675533
AT2G27050.1	GSMUA_Achr4P30680_001	AT2G25490.1	14675533
AT2G27050.1	GSMUA_Achr6P05220_001	AT2G25490.1	14675533
AT2G27050.1	GSMUA_Achr9P28510_001	AT2G25490.1	14675533
AT2G27050.1	GSMUA_Achr10P...	AT5G25350.1	14675533
AT2G27050.1	GSMUA_Achr2P15920_001	AT5G25350.1	14675533
AT2G27050.1	GSMUA_Achr4P30680_001	AT5G25350.1	14675533
AT2G27050.1	GSMUA_Achr6P05220_001	AT5G25350.1	14675533
AT2G27050.1	GSMUA_Achr9P28510_001	AT5G25350.1	14675533
AT3G20770.1	GSMUA_Achr10P...	AT2G25490.1	14675532
AT3G20770.1	GSMUA_Achr2P15920_001	AT2G25490.1	14675532
AT3G20770.1	GSMUA_Achr4P30680_001	AT2G25490.1	14675532
AT3G20770.1	GSMUA_Achr6P05220_001	AT2G25490.1	14675532
AT3G20770.1	GSMUA_Achr9P28510_001	AT2G25490.1	14675532
AT3G20770.1	GSMUA_Achr10P...	AT2G25490.1	14675533
AT3G20770.1	GSMUA_Achr2P15920_001	AT2G25490.1	14675533
AT3G20770.1	GSMUA_Achr4P30680_001	AT2G25490.1	14675533
AT3G20770.1	GSMUA_Achr6P05220_001	AT2G25490.1	14675533
AT3G20770.1	GSMUA_Achr9P28510_001	AT2G25490.1	14675533
AT3G20770.1	GSMUA_Achr10P...	AT5G25350.1	14675532
AT3G20770.1	GSMUA_Achr2P15920_001	AT5G25350.1	14675532
AT3G20770.1	GSMUA_Achr4P30680_001	AT5G25350.1	14675532
AT3G20770.1	GSMUA_Achr6P05220_001	AT5G25350.1	14675532
AT3G20770.1	GSMUA_Achr9P28510_001	AT5G25350.1	14675532
AT3G20770.1	GSMUA_Achr10P...	AT5G25350.1	14675533
AT3G20770.1	GSMUA_Achr2P15920_001	AT5G25350.1	14675533
AT3G20770.1	GSMUA_Achr4P30680_001	AT5G25350.1	14675533
AT3G20770.1	GSMUA_Achr6P05220_001	AT5G25350.1	14675533
AT3G20770.1	GSMUA_Achr9P28510_001	AT5G25350.1	14675533

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P15930_001	Banana	nucleus	84.87	85.52
GSMUA_Achr3P09440_001	Banana	nucleus	67.43	66.54
GSMUA_Achr2P11540_001	Banana	nucleus	74.52	64.4
GSMUA_Achr5P27670_001	Banana	nucleus	74.14	61.72
GSMUA_Achr9P17080_001	Banana	nucleus	71.84	60.29
GSMUA_Achr8P21550_001	Banana	nucleus	73.18	60.25
TraesCS4A01G129400.1	Wheat	nucleus	62.26	59.41
GSMUA_Achr11P...	Banana	nucleus	66.48	58.61
Os03t0324300-02	Rice	nucleus	66.86	54.45
EER94933	Sorghum	nucleus	66.28	53.81
Os03t0324200-01	Rice	nucleus	66.28	53.73
TraesCS4D01G177000.1	Wheat	nucleus	66.48	53.3
Zm00001d047563_P001	Maize	nucleus	65.52	53.27
TraesCS4B01G175100.1	Wheat	nucleus	66.28	53.23
HORVU4Hr1G051680.1	Barley	nucleus	66.28	53.15
Zm00001d028974_P001	Maize	nucleus	65.52	52.86
Os07t0685700-01	Rice	mitochondrion, nucleus	57.85	50.93
CDY32390	Canola	nucleus	51.92	49.36
CDX82228	Canola	nucleus	51.15	49.35
OQU90496	Sorghum	nucleus	55.94	49.16
Zm00001d007188_P001	Maize	nucleus	55.36	48.57
CDY38540	Canola	nucleus	52.11	48.31
Bra000528.1-P	Field mustard	nucleus	52.68	48.16
CDX83250	Canola	nucleus	52.49	48.07
VIT_13s0047g00250.t01	Wine grape	nucleus	56.51	47.89
KRH14682	Soybean	nucleus	55.56	47.54
Zm00001d022530_P001	Maize	nucleus	41.19	47.36
AT2G27050.1	Thale cress	nucleus	52.87	47.26
KRH73465	Soybean	nucleus	55.17	46.91
KRH18695	Soybean	nucleus	55.56	46.7
CDY27563	Canola	nucleus	52.49	46.68
Bra001802.1-P	Field mustard	nucleus	51.72	46.47
KRG89856	Soybean	nucleus	55.17	46.15
Solyc01g096810.2.1	Tomato	nucleus	53.07	46.09
TraesCS2A01G099900.1	Wheat	nucleus	54.02	45.63
TraesCS2B01G116900.1	Wheat	nucleus	53.83	45.4
TraesCS2D01G099400.1	Wheat	nucleus	53.83	45.32
PGSC0003DMT400070751	Potato	nucleus	51.92	45.32
KRH18696	Soybean	nucleus	53.07	44.82
GSMUA_Achr10P...	Banana	nucleus	28.16	43.62
AT3G20770.1	Thale cress	nucleus	52.3	43.47
CDY19606	Canola	nucleus	33.72	38.26
CDY06379	Canola	nucleus	35.63	38.19
CDY60391	Canola	nucleus	29.69	36.47
GSMUA_AchrUn_...	Banana	nucleus	30.08	36.18
Bra035746.1-P	Field mustard	nucleus	33.52	35.71
Bra023927.1-P	Field mustard	nucleus	30.08	35.44
GSMUA_Achr7P21630_001	Banana	nucleus	43.68	34.81
GSMUA_Achr8P17130_001	Banana	nucleus	35.82	34.19
GSMUA_Achr6P23310_001	Banana	nucleus	35.82	33.94
GSMUA_Achr3P11160_001	Banana	nucleus	36.78	33.63
GSMUA_Achr9P27680_001	Banana	nucleus	38.51	32.95
GSMUA_Achr8P25580_001	Banana	nucleus	37.93	32.14

Protein Annotations

Gene3D:1.10.3180.10	MapMan:11.5.2.4	MapMan:15.5.11	ncoils:Coil	InterPro:Ethylene_insens-like_DNA-bd	GO:GO:0003674
GO:GO:0003700	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr10G12800_001
EnsemblPlants:GSMUA_Achr10P12800_001	EnsemblPlants:GSMUA_Achr10T12800_001	InterPro:IPR023278	UniProt:M0RHQ6	PFAM:PF04873	PANTHER:PTHR33305
PANTHER:PTHR33305:SF1	SUPFAM:SSF116768	UniParc:UPI00029569E9	SEG:seg	:	:

Description

ETHYLENE INSENSITIVE 3-like 1 protein [Source:GMGC_GENE;Acc:GSMUA_Achr10G12800_001]

Coordinates

chr10:+:21694136..21696458

Molecular Weight (calculated)

58760.6 Da

IEP (calculated)

6.584

GRAVY (calculated)

-0.710

Length

522 amino acids

Sequence
(BLAST)

001: MGGLLMEGMV YPGGPNYVQL FPSNDEKNLC YGSLHQPSMG ECIMGEGDLV DPPPEKFAEV GDEESDEDID IEELERRMWR DRVRLKRLKE QQQNKNKEQG
101: DAAKQWQSQE QARRKKMSRA QDGILKYMLK MMEVCKAQGF VYGIIPEKGK PVSGASDNLR GWWKEKVRFD RNGPAAIAKY QADNTIPGSN NEVVSSTVSP
201: HSLQELQDTT LGSLLSALMQ HCDPPQRRFP LEKGVAPPWW PTGREEWWPQ SGIPNEQGPP PYKKPHDLKK AWKVSVLTAV IKHISPDIEK IRRLVRQSKC
301: LQDKMTAKEI ATWLAVVKQE EDMYMKLHPD TCLPPSSGSG LTGAISFNTS CGDYDVEGRT AAEPELLLNQ RIYTCDNAKC PHHDFCHGFT DRNARNSHQY
401: LCKYQNTFPQ SIGALLNPIS VSDLGIPSDG QKSINELMGF YDNNISGDKS LTLGMGSLVQ QPQFFVREDM MPFGQQFSNQ PNESSGGFRF TSGLNIPAVD
501: YSNAASQRGM LQKKHDGSNW FY

Best Arabidopsis Sequence Match ( AT2G27050.1 )
(BLAST)

001: MMMFNEMGMY GNMDFFSSST SLDVCPLPQA EQEPVVEDVD YTDDEMDVDE LEKRMWRDKM RLKRLKEQQS KCKEGVDGSK QRQSQEQARR KKMSRAQDGI
101: LKYMLKMMEV CKAQGFVYGI IPEKGKPVTG ASDNLREWWK DKVRFDRNGP AAIAKYQSEN NISGGSNDCN SLVGPTPHTL QELQDTTLGS LLSALMQHCD
201: PPQRRFPLEK GVSPPWWPNG NEEWWPQLGL PNEQGPPPYK KPHDLKKAWK VGVLTAVIKH MSPDIAKIRK LVRQSKCLQD KMTAKESATW LAIINQEEVV
301: ARELYPESCP PLSSSSSLGS GSLLINDCSE YDVEGFEKEQ HGFDVEERKP EIVMMHPLAS FGVAKMQHFP IKEEVATTVN LEFTRKRKQN NDMNVMVMDR
401: SAGYTCENGQ CPHSKMNLGF QDRSSRDNHQ MVCPYRDNRL AYGASKFHMG GMKLVVPQQP VQPIDLSGVG VPENGQKMIT ELMAMYDRNV QSNQTPPTLM
501: ENQSMVIDAK AAQNQQLNFN SGNQMFMQQG TNNGVNNRFQ MVFDSTPFDM AAFDYRDDWQ TGAMEGMGKQ QQQQQQQQDV SIWF

Arabidopsis Description

EIL1ETHYLENE INSENSITIVE 3-like 1 protein [Source:UniProtKB/Swiss-Prot;Acc:Q9SLH0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.