Factsheet for Solyc01g009170.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
extracellular 2
golgi 2
plasma membrane 2
endoplasmic reticulum 2
vacuole 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc06g030610.1.1
Solyc06g030620.1.1
Solyc06g049010.1.1
Solyc08g060810.2.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G27050.1	Solyc06g030610.1.1	AT2G25490.1	14675533
AT2G27050.1	Solyc06g030620.1.1	AT2G25490.1	14675533
AT2G27050.1	Solyc06g049010.1.1	AT2G25490.1	14675533
AT2G27050.1	Solyc08g060810.2.1	AT2G25490.1	14675533
AT2G27050.1	Solyc06g030610.1.1	AT5G25350.1	14675533
AT2G27050.1	Solyc06g030620.1.1	AT5G25350.1	14675533
AT2G27050.1	Solyc06g049010.1.1	AT5G25350.1	14675533
AT2G27050.1	Solyc08g060810.2.1	AT5G25350.1	14675533
AT3G20770.1	Solyc06g030610.1.1	AT2G25490.1	14675532
AT3G20770.1	Solyc06g030620.1.1	AT2G25490.1	14675532
AT3G20770.1	Solyc06g049010.1.1	AT2G25490.1	14675532
AT3G20770.1	Solyc08g060810.2.1	AT2G25490.1	14675532
AT3G20770.1	Solyc06g030610.1.1	AT2G25490.1	14675533
AT3G20770.1	Solyc06g030620.1.1	AT2G25490.1	14675533
AT3G20770.1	Solyc06g049010.1.1	AT2G25490.1	14675533
AT3G20770.1	Solyc08g060810.2.1	AT2G25490.1	14675533
AT3G20770.1	Solyc06g030610.1.1	AT5G25350.1	14675532
AT3G20770.1	Solyc06g030620.1.1	AT5G25350.1	14675532
AT3G20770.1	Solyc06g049010.1.1	AT5G25350.1	14675532
AT3G20770.1	Solyc08g060810.2.1	AT5G25350.1	14675532
AT3G20770.1	Solyc06g030610.1.1	AT5G25350.1	14675533
AT3G20770.1	Solyc06g030620.1.1	AT5G25350.1	14675533
AT3G20770.1	Solyc06g049010.1.1	AT5G25350.1	14675533
AT3G20770.1	Solyc08g060810.2.1	AT5G25350.1	14675533

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400022477	Potato	nucleus	96.91	96.91
Solyc06g073720.1.1	Tomato	nucleus	74.59	75.08
Solyc06g073730.1.1	Tomato	nucleus	73.78	74.88
KRH14682	Soybean	nucleus	64.98	65.41
KRG89856	Soybean	nucleus	66.29	65.22
KRH18695	Soybean	nucleus	65.96	65.22
KRH73465	Soybean	nucleus	64.66	64.66
CDX82228	Canola	nucleus	56.19	63.77
CDY32390	Canola	nucleus	56.35	63.02
KRH18696	Soybean	nucleus	63.35	62.95
VIT_06s0009g01380.t01	Wine grape	nucleus	62.38	62.79
Bra001802.1-P	Field mustard	nucleus	58.96	62.31
AT3G20770.1	Thale cress	nucleus	62.05	60.67
AT2G27050.1	Thale cress	nucleus	57.0	59.93
CDY38540	Canola	nucleus	54.72	59.68
Bra000528.1-P	Field mustard	nucleus	55.21	59.37
CDX83250	Canola	nucleus	54.72	58.95
CDY27563	Canola	nucleus	56.03	58.6
CDY19606	Canola	nucleus	40.39	53.91
CDY06379	Canola	nucleus	42.67	53.8
Bra035746.1-P	Field mustard	nucleus	42.18	52.86
Solyc01g096810.2.1	Tomato	nucleus	51.63	52.75
CDY60391	Canola	nucleus	36.16	52.24
Bra023927.1-P	Field mustard	nucleus	36.65	50.79
Solyc03g096630.1.1	Tomato	nucleus	28.01	39.63
Os02t0689132-00	Rice	nucleus	11.24	38.98
Solyc04g054840.1.1	Tomato	nucleus	29.97	36.58
Solyc01g014480.2.1	Tomato	nucleus	36.65	33.33
Solyc01g006650.1.1	Tomato	nucleus	34.69	32.27

Protein Annotations

Gene3D:1.10.3180.10	MapMan:11.5.2.4	MapMan:15.5.11	EMBL:AF328785	ncoils:Coil	InterPro:Ethylene_insens-like_DNA-bd
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009719	GO:GO:0009873
GO:GO:0009987	GO:GO:0071281	InterPro:IPR023278	PFAM:PF04873	PANTHER:PTHR33305	PANTHER:PTHR33305:SF1
UniProt:Q94FV3	SUPFAM:SSF116768	EnsemblPlantsGene:Solyc01g009170.2	EnsemblPlants:Solyc01g009170.2.1	UniParc:UPI00000A41FA	SEG:seg

Description

EIL2 [Source:UniProtKB/TrEMBL;Acc:Q94FV3]

Coordinates

chr1:-:3203718..3206211

Molecular Weight (calculated)

69140.0 Da

IEP (calculated)

5.164

GRAVY (calculated)

-0.636

Length

614 amino acids

Sequence
(BLAST)

001: MMMFEDIGFC ADLDFFPAPL KEAETVAAVP PIVPEPMMDD DDSDEEIDVD ELEKRMWRDK MKLKRLKEMS KGKEGVDAVK QRQSQEQARR KKMSRAQDGI
101: LKYMLKMMEV CKAQGFVYGI IPEKGKPVTG ASDNLREWWK DKVRFDRNGP AAIAKYQADN AIPGKNEGAN PIGPTPHTLQ ELQDTTLGSL LSALMQHCDP
201: PQRRFPLEKG VSPPWWPNGQ EDWWPQLGLP NDQGPPPYKK PHDLKKAWKV GVLTAVIKHI SPDIAKIRKL VRQSKCLQDK MTAKESATWL AIINQEEVLA
301: RELYPDRCPP LSSGGSSGTF TMNDSSEYDV EGAIDDPIFD VQEQKPNHLS LLNVNVEMFK EKLPLLQQSQ PMKGDIFANL DFTRKRKPAD DLTFLMDPKT
401: YTCECLHCPH SELRNGFPDR SSRDNHQLTC LFRNTSQFVV PNFHMEEVKP VVFPQQYAEP KRASLPVNPA PPSFDTSGLG VPADGQRVIN ELMSFYESNV
501: QGNKSSMAGN SVMSKEQPLQ QPSIQQNNYL QSQGNVLEGS IFGDTNISAN NSMFVQGDRF DQSKVLTSPF NASSTDDFNF MFGSPFNMQS TDLSECLSGI
601: SHDDVTKQDA SVWY

Best Arabidopsis Sequence Match ( AT3G20770.1 )
(BLAST)

001: MMFNEMGMCG NMDFFSSGSL GEVDFCPVPQ AEPDSIVEDD YTDDEIDVDE LERRMWRDKM RLKRLKEQDK GKEGVDAAKQ RQSQEQARRK KMSRAQDGIL
101: KYMLKMMEVC KAQGFVYGII PENGKPVTGA SDNLREWWKD KVRFDRNGPA AITKYQAENN IPGIHEGNNP IGPTPHTLQE LQDTTLGSLL SALMQHCDPP
201: QRRFPLEKGV PPPWWPNGKE DWWPQLGLPK DQGPAPYKKP HDLKKAWKVG VLTAVIKHMF PDIAKIRKLV RQSKCLQDKM TAKESATWLA IINQEESLAR
301: ELYPESCPPL SLSGGSCSLL MNDCSQYDVE GFEKESHYEV EELKPEKVMN SSNFGMVAKM HDFPVKEEVP AGNSEFMRKR KPNRDLNTIM DRTVFTCENL
401: GCAHSEISRG FLDRNSRDNH QLACPHRDSR LPYGAAPSRF HVNEVKPVVG FPQPRPVNSV AQPIDLTGIV PEDGQKMISE LMSMYDRNVQ SNQTSMVMEN
501: QSVSLLQPTV HNHQEHLQFP GNMVEGSFFE DLNIPNRANN NNSSNNQTFF QGNNNNNNVF KFDTADHNNF EAAHNNNNNS SGNRFQLVFD STPFDMASFD
601: YRDDMSMPGV VGTMDGMQQK QQDVSIWF

Arabidopsis Description

EIN3Protein ETHYLENE INSENSITIVE 3 [Source:UniProtKB/Swiss-Prot;Acc:O24606]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.