Factsheet for TraesCS2D01G320800.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G340200.1	Wheat	nucleus	95.05	94.85
TraesCS2A01G342500.1	Wheat	nucleus	92.04	91.85
HORVU2Hr1G079900.1	Barley	nucleus	90.97	90.0
Os04t0456900-00	Rice	nucleus	45.59	62.54
Zm00001d003451_P001	Maize	nucleus	66.02	57.71
KXG26452	Sorghum	nucleus	58.06	57.45
TraesCS3D01G390000.1	Wheat	nucleus	51.4	52.18
GSMUA_Achr10P...	Banana	nucleus	37.42	51.63
TraesCS6D01G326600.1	Wheat	nucleus	49.89	50.66
KRH31276	Soybean	nucleus	34.19	39.95
CDX81161	Canola	nucleus	16.13	39.06
KRH43217	Soybean	nucleus	34.41	35.32
Solyc03g096630.1.1	Tomato	nucleus	32.9	35.25
KRH59382	Soybean	nucleus	34.19	34.42
KRG97597	Soybean	nucleus	33.76	33.84
PGSC0003DMT400053147	Potato	nucleus	32.69	33.63
Bra028601.1-P	Field mustard	nucleus	32.9	33.63
CDX85778	Canola	nucleus	32.9	33.63
CDY40078	Canola	nucleus	32.47	33.33
AT5G10120.1	Thale cress	nucleus	32.47	32.06
VIT_00s0357g00120.t01	Wine grape	nucleus	32.69	31.41
Solyc04g054840.1.1	Tomato	nucleus	32.04	29.62
AT5G65100.1	Thale cress	nucleus	34.19	28.55
CDX78369	Canola	nucleus	18.49	26.14
Bra006050.1-P	Field mustard	nucleus	18.49	26.14
TraesCS2D01G099400.1	Wheat	nucleus	34.41	25.81
TraesCS4D01G177000.1	Wheat	nucleus	35.48	25.35
PGSC0003DMT400043160	Potato	nucleus	14.62	24.46
TraesCS7D01G244600.1	Wheat	nucleus	31.61	23.94
TraesCS5D01G273600.1	Wheat	nucleus	30.75	23.37
Bra024354.1-P	Field mustard	nucleus	17.63	23.1
CDY08821	Canola	nucleus	17.42	22.82
CDY14539	Canola	nucleus	17.63	22.04

Protein Annotations

EnsemblPlants:TraesCS2D01G320800.1	EnsemblPlantsGene:TraesCS2D01G320800	Gene3D:1.10.3180.10	GO:GO:0003674	GO:GO:0003700	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:Ethylene_insens-like_DNA-bd	InterPro:IPR023278	PANTHER:PTHR33305	PANTHER:PTHR33305:SF4
PFAM:PF04873	SEG:seg	SUPFAM:SSF116768	MapMan:11.5.2.4	MapMan:15.5.11	:

Description

No Description!

Coordinates

chr2D:+:412254503..412255900

Molecular Weight (calculated)

51481.4 Da

IEP (calculated)

4.870

GRAVY (calculated)

-0.691

Length

465 amino acids

Sequence
(BLAST)

001: MGSPSNDKPI PGLHQLPRPA MDRGKTKADP HAVAVAAKPD LQDDSESESD SESIEIADLK KRMWKDQLLL MKLEGSPGHD RRAIAQGPGT DLAQAEKEAE
101: MPESRYRRKA MLRAQDGVLR HMLRMMEACN ARGFVYGIVD ETGMPVSGSS DSLRGWWKED VGFERTGPTA LAGPSTALES PGSSFLHGLL DIQDSTLGSL
201: LSALIQHCEP PQRSFPLDRG LPPPWWPTGQ EVWWGLQGKT QAHQGPPPYR KPHDLKKAWK ISLLSAVIKH LSPRFDQMRK LVWQSKRLQH RMSARDAETW
301: SRVITQEEAL DRHVQRALRI TPLDEEDDDD DKEPREAERD LHVDKRKREV GNESAGGNVD SGSGRELVAL PGIDVVAEAD RNSIDELMMM YYSCLQGTDG
401: GEQEIKDVVA GGGEQNNTSC AETGVLDAAT VRDDMFDDFL SVADVVDTSD FPGSPIWHRG SSDLD

Best Arabidopsis Sequence Match ( AT1G73730.1 )
(BLAST)

001: MGDLAMSVAD IRMENEPDDL ASDNVAEIDV SDEEIDADDL ERRMWKDRVR LKRIKERQKA GSQGAQTKET PKKISDQAQR KKMSRAQDGI LKYMLKLMEV
101: CKVRGFVYGI IPEKGKPVSG SSDNIRAWWK EKVKFDKNGP AAIAKYEEEC LAFGKSDGNR NSQFVLQDLQ DATLGSLLSS LMQHCDPPQR KYPLEKGTPP
201: PWWPTGNEEW WVKLGLPKSQ SPPYRKPHDL KKMWKVGVLT AVINHMLPDI AKIKRHVRQS KCLQDKMTAK ESAIWLAVLN QEESLIQQPS SDNGNSNVTE
301: THRRGNNADR RKPVVNSDSD YDVDGTEEAS GSVSSKDSRR NQIQKEQPTA ISHSVRDQDK AEKHRRRKRP RIRSGTVNRQ EEEQPEAQQR NILPDMNHVD
401: APLLEYNING THQEDDVVDP NIALGPEDNG LELVVPEFNN NYTYLPLVNE QTMMPVDERP MLYGPNPNQE LQFGSGYNFY NPSAVFVHNQ EDDILHTQIE
501: MNTQAPPHNS GFEEAPGGVL QPLGLLGNED GVTGSELPQY QSGILSPLTD LDFDYGGFGD DFSWFGA

Arabidopsis Description

EIL3SLIM1 [Source:UniProtKB/TrEMBL;Acc:A0A178VZZ3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.