Factsheet for TraesCS3D01G390000.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G396000.1	Wheat	nucleus	95.2	96.46
TraesCS3B01G428000.1	Wheat	nucleus	90.61	94.97
HORVU3Hr1G089250.3	Barley	nucleus	90.39	89.61
Zm00001d016924_P001	Maize	nucleus	60.92	65.03
Zm00001d050861_P001	Maize	nucleus	62.01	64.4
EES05301	Sorghum	nucleus	66.16	63.39
TraesCS6D01G326600.1	Wheat	nucleus	62.88	62.88
GSMUA_Achr10P...	Banana	nucleus	40.61	55.19
TraesCS2D01G320800.1	Wheat	nucleus	52.18	51.4
CDX81161	Canola	nucleus	17.03	40.62
KRH31276	Soybean	nucleus	32.97	37.94
Bra028601.1-P	Field mustard	nucleus	35.37	35.6
CDX85778	Canola	nucleus	35.37	35.6
CDY40078	Canola	nucleus	35.15	35.54
Solyc03g096630.1.1	Tomato	nucleus	32.53	34.33
KRH43217	Soybean	nucleus	33.41	33.77
PGSC0003DMT400053147	Potato	nucleus	33.19	33.63
KRG97597	Soybean	nucleus	33.84	33.41
AT5G10120.1	Thale cress	nucleus	34.06	33.12
KRH59382	Soybean	nucleus	33.41	33.12
VIT_00s0357g00120.t01	Wine grape	nucleus	33.41	31.61
Solyc04g054840.1.1	Tomato	nucleus	31.88	29.03
AT5G65100.1	Thale cress	nucleus	34.06	28.01
CDX78369	Canola	nucleus	19.0	26.44
Bra006050.1-P	Field mustard	nucleus	19.0	26.44
TraesCS4D01G177000.1	Wheat	nucleus	37.12	26.11
TraesCS2D01G099400.1	Wheat	nucleus	34.5	25.48
TraesCS5D01G273600.1	Wheat	nucleus	32.75	24.51
TraesCS7D01G244600.1	Wheat	nucleus	32.1	23.94
PGSC0003DMT400043160	Potato	nucleus	14.41	23.74
Bra024354.1-P	Field mustard	nucleus	15.94	20.56
CDY08821	Canola	nucleus	15.72	20.28
CDY14539	Canola	nucleus	16.38	20.16

Protein Annotations

EnsemblPlants:TraesCS3D01G390000.1	EnsemblPlantsGene:TraesCS3D01G390000	Gene3D:1.10.3180.10	GO:GO:0003674	GO:GO:0003700	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:Ethylene_insens-like_DNA-bd	InterPro:IPR023278	PANTHER:PTHR33305	PANTHER:PTHR33305:SF7
PFAM:PF04873	SEG:seg	SUPFAM:SSF116768	MapMan:11.5.2.4	MapMan:15.5.11	:

Description

No Description!

Coordinates

chr3D:-:505065037..505066413

Molecular Weight (calculated)

50818.1 Da

IEP (calculated)

5.422

GRAVY (calculated)

-0.751

Length

458 amino acids

Sequence
(BLAST)

001: MDKGIHGRSP LSAESAGMEH GDGLGGPDPG GQQREEEEIS DSESGSESLE ISDLKKRMWK DQMLLTRLEG RAGARGMAPA PAARASSSSS SGQEETPDVR
101: CRRKAMLRAQ DGVLRHMLRM MEACNARGFV YGVIDEAGEP MSGSSDSLRG WWKENVSFDR AGPMGLAGPM GESPVALASS LHRLQDIQDS TLGSVLSALI
201: QHCEPPQRSF PLERGLAPPW WPTGHEPWWG TQGEMQAHQG VPPYRKPHDL KKAWKISLLS AVIKHMSPRF DQMRKLVWQS KRLQQKMSAK ESETWSKVLR
301: QEEKLSSRLK SSLRITPFDQ EHADEDEDDE EEGKKKKVGK ERDDDGLESV VRGAQDKRKR EISRSGRSGG SGSELTIMLP DQLATAITEE SRSPIDELMK
401: LYYGCMQGVE TYGDREKDDL TPMHSVLLGG IDEVAQDVLY DIIGSCPEVD HVLRLMGE

Best Arabidopsis Sequence Match ( AT1G73730.2 )
(BLAST)

001: MENEPDDLAS DNVAEIDVSD EEIDADDLER RMWKDRVRLK RIKERQKAGS QGAQTKETPK KISDQAQRKK MSRAQDGILK YMLKLMEVCK VRGFVYGIIP
101: EKGKPVSGSS DNIRAWWKEK VKFDKNGPAA IAKYEEECLA FGKSDGNRNS QFVLQDLQDA TLGSLLSSLM QHCDPPQRKY PLEKGTPPPW WPTGNEEWWV
201: KLGLPKSQSP PYRKPHDLKK MWKVGVLTAV INHMLPDIAK IKRHVRQSKC LQDKMTAKES AIWLAVLNQE ESLIQQPSSD NGNSNVTETH RRGNNADRRK
301: PVVNSDSDYD VDGTEEASGS VSSKDSRRNQ IQKEQPTAIS HSVRDQDKAE KHRRRKRPRI RSGTVNRQEE EQPEAQQRNI LPDMNHVDAP LLEYNINGTH
401: QEDDVVDPNI ALGPEDNGLE LVVPEFNNNY TYLPLVNEQT MMPVDERPML YGPNPNQELQ FGSGYNFYNP SAVFVHNQED DILHTQIEMN TQAPPHNSGF
501: EEAPGGVLQP LGLLGNEDGV TGSELPQYQS GILSPLTDLD FDYGGFGDDF SWFGA

Arabidopsis Description

EIL3SLIM1 [Source:UniProtKB/TrEMBL;Acc:A0A178VZZ3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.