Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G340200.1 | Wheat | nucleus | 93.99 | 93.99 |
| TraesCS2D01G320800.1 | Wheat | nucleus | 91.85 | 92.04 |
| HORVU2Hr1G079900.1 | Barley | nucleus | 91.2 | 90.43 |
| Os04t0456900-00 | Rice | nucleus | 45.49 | 62.54 |
| KXG26452 | Sorghum | nucleus | 58.15 | 57.66 |
| Zm00001d003451_P001 | Maize | nucleus | 65.67 | 57.52 |
| TraesCS3A01G396000.1 | Wheat | nucleus | 51.5 | 53.1 |
| GSMUA_Achr10P... | Banana | nucleus | 37.34 | 51.63 |
| CDX81161 | Canola | nucleus | 16.31 | 39.58 |
| KRH31276 | Soybean | nucleus | 33.48 | 39.2 |
| KRH43217 | Soybean | nucleus | 34.12 | 35.1 |
| Solyc03g096630.1.1 | Tomato | nucleus | 32.62 | 35.02 |
| PGSC0003DMT400053147 | Potato | nucleus | 33.48 | 34.51 |
| KRH59382 | Soybean | nucleus | 33.91 | 34.2 |
| CDX85778 | Canola | nucleus | 32.83 | 33.63 |
| Bra028601.1-P | Field mustard | nucleus | 32.83 | 33.63 |
| KRG97597 | Soybean | nucleus | 33.26 | 33.41 |
| CDY40078 | Canola | nucleus | 32.4 | 33.33 |
| AT5G10120.1 | Thale cress | nucleus | 31.97 | 31.63 |
| VIT_00s0357g00120.t01 | Wine grape | nucleus | 32.62 | 31.41 |
| Solyc04g054840.1.1 | Tomato | nucleus | 32.62 | 30.22 |
| TraesCS4A01G129400.1 | Wheat | nucleus | 33.48 | 28.52 |
| AT5G65100.1 | Thale cress | nucleus | 33.48 | 28.01 |
| CDX78369 | Canola | nucleus | 18.67 | 26.44 |
| Bra006050.1-P | Field mustard | nucleus | 18.67 | 26.44 |
| TraesCS2A01G099900.1 | Wheat | nucleus | 34.12 | 25.73 |
| PGSC0003DMT400043160 | Potato | nucleus | 14.38 | 24.1 |
| TraesCS7A01G246100.1 | Wheat | nucleus | 31.33 | 23.78 |
| Bra024354.1-P | Field mustard | nucleus | 17.38 | 22.82 |
| CDY08821 | Canola | nucleus | 17.17 | 22.54 |
| TraesCS5A01G265700.1 | Wheat | nucleus | 27.47 | 21.96 |
| CDY14539 | Canola | nucleus | 17.38 | 21.77 |
Protein Annotations
| Gene3D:1.10.3180.10 | MapMan:11.5.2.4 | MapMan:15.5.11 | InterPro:Ethylene_insens-like_DNA-bd | GO:GO:0003674 | GO:GO:0003700 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR023278 | PFAM:PF04873 | PANTHER:PTHR33305 |
| PANTHER:PTHR33305:SF4 | SUPFAM:SSF116768 | EnsemblPlantsGene:TraesCS2A01G342500 | EnsemblPlants:TraesCS2A01G342500.1 | SEG:seg | : |
Description
No Description!
Coordinates
chr2A:+:579583207..579584607
Molecular Weight (calculated)
51448.2 Da
IEP (calculated)
4.672
GRAVY (calculated)
-0.697
Length
466 amino acids
Sequence
(BLAST)
(BLAST)
001: MESPSNDKPI PGLHELPPAV MDRGKAKADP ANPHAVAVAT EPDLQDDSES ESGSESIEIA DLKKRMWKDQ LLLMKLEGTP GHERRATGQR PDTDLAQAEK
101: EAEMPESRYR RKAMLRAQDG VLRHMLRMME ACNARGFVYG IVDETGMPVS GSSDSLRGWW KEDVGFERTG PTALAGPSTA LESPGSSFLH GLLDIQDSTL
201: GSLLSALIQH CEPPQRSFPL DRGLPPPWWP TGQEFWWGLQ GETQAHQGPP PYRKPHDLKK AWKISLLSAV IKHLSSRFDQ MRKLVWQSKR LQHRMSAKDA
301: ETWSRVITQE EALDRQVQRA LRITPLEEED DDKEPQEAEH GLHVDKRKRG VGNESAGGND DSGSGRELVA LPVIDGVAEA DRNSIDELMK MYYSCLQGTD
401: GGEQEIKDVA AGGGEQSNTS SAETGVLDAA TVRDDMFDDF LSVADVVDMS DCPGSPIWHW GSSDLD
101: EAEMPESRYR RKAMLRAQDG VLRHMLRMME ACNARGFVYG IVDETGMPVS GSSDSLRGWW KEDVGFERTG PTALAGPSTA LESPGSSFLH GLLDIQDSTL
201: GSLLSALIQH CEPPQRSFPL DRGLPPPWWP TGQEFWWGLQ GETQAHQGPP PYRKPHDLKK AWKISLLSAV IKHLSSRFDQ MRKLVWQSKR LQHRMSAKDA
301: ETWSRVITQE EALDRQVQRA LRITPLEEED DDKEPQEAEH GLHVDKRKRG VGNESAGGND DSGSGRELVA LPVIDGVAEA DRNSIDELMK MYYSCLQGTD
401: GGEQEIKDVA AGGGEQSNTS SAETGVLDAA TVRDDMFDDF LSVADVVDMS DCPGSPIWHW GSSDLD
001: MGDLAMSVAD IRMENEPDDL ASDNVAEIDV SDEEIDADDL ERRMWKDRVR LKRIKERQKA GSQGAQTKET PKKISDQAQR KKMSRAQDGI LKYMLKLMEV
101: CKVRGFVYGI IPEKGKPVSG SSDNIRAWWK EKVKFDKNGP AAIAKYEEEC LAFGKSDGNR NSQFVLQDLQ DATLGSLLSS LMQHCDPPQR KYPLEKGTPP
201: PWWPTGNEEW WVKLGLPKSQ SPPYRKPHDL KKMWKVGVLT AVINHMLPDI AKIKRHVRQS KCLQDKMTAK ESAIWLAVLN QEESLIQQPS SDNGNSNVTE
301: THRRGNNADR RKPVVNSDSD YDVDGTEEAS GSVSSKDSRR NQIQKEQPTA ISHSVRDQDK AEKHRRRKRP RIRSGTVNRQ EEEQPEAQQR NILPDMNHVD
401: APLLEYNING THQEDDVVDP NIALGPEDNG LELVVPEFNN NYTYLPLVNE QTMMPVDERP MLYGPNPNQE LQFGSGYNFY NPSAVFVHNQ EDDILHTQIE
501: MNTQAPPHNS GFEEAPGGVL QPLGLLGNED GVTGSELPQY QSGILSPLTD LDFDYGGFGD DFSWFGA
101: CKVRGFVYGI IPEKGKPVSG SSDNIRAWWK EKVKFDKNGP AAIAKYEEEC LAFGKSDGNR NSQFVLQDLQ DATLGSLLSS LMQHCDPPQR KYPLEKGTPP
201: PWWPTGNEEW WVKLGLPKSQ SPPYRKPHDL KKMWKVGVLT AVINHMLPDI AKIKRHVRQS KCLQDKMTAK ESAIWLAVLN QEESLIQQPS SDNGNSNVTE
301: THRRGNNADR RKPVVNSDSD YDVDGTEEAS GSVSSKDSRR NQIQKEQPTA ISHSVRDQDK AEKHRRRKRP RIRSGTVNRQ EEEQPEAQQR NILPDMNHVD
401: APLLEYNING THQEDDVVDP NIALGPEDNG LELVVPEFNN NYTYLPLVNE QTMMPVDERP MLYGPNPNQE LQFGSGYNFY NPSAVFVHNQ EDDILHTQIE
501: MNTQAPPHNS GFEEAPGGVL QPLGLLGNED GVTGSELPQY QSGILSPLTD LDFDYGGFGD DFSWFGA
Arabidopsis Description
EIL3SLIM1 [Source:UniProtKB/TrEMBL;Acc:A0A178VZZ3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.