Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G273600.1 | Wheat | nucleus | 95.07 | 94.61 |
| TraesCS5A01G265700.1 | Wheat | nucleus | 89.66 | 93.65 |
| TraesCS5B01G265400.1 | Wheat | nucleus | 88.83 | 92.96 |
| Os09t0490200-01 | Rice | nucleus | 79.15 | 78.89 |
| EER99089 | Sorghum | nucleus | 77.34 | 77.34 |
| Zm00001d020939_P001 | Maize | nucleus | 77.01 | 77.01 |
| HORVU7Hr1G050560.1 | Barley | nucleus | 61.58 | 60.98 |
| HORVU0Hr1G011440.1 | Barley | nucleus | 38.42 | 60.47 |
| GSMUA_Achr9P27680_001 | Banana | nucleus | 54.02 | 53.93 |
| GSMUA_Achr8P25580_001 | Banana | nucleus | 53.86 | 53.25 |
| GSMUA_Achr3P11160_001 | Banana | nucleus | 49.26 | 52.54 |
| HORVU7Hr1G050590.1 | Barley | nucleus | 23.97 | 50.0 |
| HORVU4Hr1G051680.1 | Barley | nucleus | 35.8 | 33.49 |
| HORVU3Hr1G089250.3 | Barley | nucleus | 24.79 | 32.68 |
| HORVU2Hr1G079900.1 | Barley | nucleus | 24.14 | 31.28 |
Protein Annotations
| Gene3D:1.10.3180.10 | MapMan:11.5.2.4 | MapMan:15.5.11 | EMBL:AK364187 | ncoils:Coil | InterPro:Ethylene_insens-like_DNA-bd |
| UniProt:F2DJW9 | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | EnsemblPlantsGene:HORVU5Hr1G073380 | EnsemblPlants:HORVU5Hr1G073380.1 | InterPro:IPR023278 | PFAM:PF04873 | PANTHER:PTHR33305 |
| PANTHER:PTHR33305:SF2 | SUPFAM:SSF116768 | UniParc:UPI0002006700 | SEG:seg | : | : |
Description
Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2DJW9]
Coordinates
chrchr5H:+:538637629..538640599
Molecular Weight (calculated)
68017.2 Da
IEP (calculated)
6.075
GRAVY (calculated)
-0.666
Length
609 amino acids
Sequence
(BLAST)
(BLAST)
001: MDQLALLATE FGDSSDFEVD GINENDVSDE EIEPEELARR MWKDRVRLRR IKEREQRLAL QQAELEKSKP KQISDQAMRK KMARAQDGIL KYMLKLMEVC
101: NARGFVYGII PEKGKPVSGA SDNIRAWWKE KVKFDKNGPA AIAKYEAEHL VDANAQSSAV KNEHSLMDLQ DATLGSLLSS LMQHCNPPQR KYPLEKGTPP
201: PWWPAGNEEW WAALGLPRGQ FAPYKKPHDL KKVWKVGVLT CVIKHMSPNF DKIRNHVRKS KILQDKMTAK ESLIWLGVLQ REERLVLGID NGVSEITHHS
301: APEDRNRAMI AHSSSNEYDV DGFEEAPLST SSKDDEQGLS PAAQSSEEHV SRSGRERANT KHVYQAVLLK EGTKKQPPKR KRARHSSVAV EQEVQRTDDA
401: PENLIPDMNR LDQVEIPGMA NQITSFNQMA VTSEALQHRG NAQGHVYLPG AGVNSFDNAQ PVDATPVSIY MGDQHVRYGS SDDARSKSGN PFPLHADSGF
501: NSFPSSYQTL PPKQSLPLPM MDHHVVPMGI RAAADNSPYG DHVIGGGNST SVPGDMQHLV DFPFYGEQDK FVGSSFEGLP LDYISMSSPI PDIDDLLLHD
601: DDLMEYLGT
101: NARGFVYGII PEKGKPVSGA SDNIRAWWKE KVKFDKNGPA AIAKYEAEHL VDANAQSSAV KNEHSLMDLQ DATLGSLLSS LMQHCNPPQR KYPLEKGTPP
201: PWWPAGNEEW WAALGLPRGQ FAPYKKPHDL KKVWKVGVLT CVIKHMSPNF DKIRNHVRKS KILQDKMTAK ESLIWLGVLQ REERLVLGID NGVSEITHHS
301: APEDRNRAMI AHSSSNEYDV DGFEEAPLST SSKDDEQGLS PAAQSSEEHV SRSGRERANT KHVYQAVLLK EGTKKQPPKR KRARHSSVAV EQEVQRTDDA
401: PENLIPDMNR LDQVEIPGMA NQITSFNQMA VTSEALQHRG NAQGHVYLPG AGVNSFDNAQ PVDATPVSIY MGDQHVRYGS SDDARSKSGN PFPLHADSGF
501: NSFPSSYQTL PPKQSLPLPM MDHHVVPMGI RAAADNSPYG DHVIGGGNST SVPGDMQHLV DFPFYGEQDK FVGSSFEGLP LDYISMSSPI PDIDDLLLHD
601: DDLMEYLGT
001: MGDLAMSVAD IRMENEPDDL ASDNVAEIDV SDEEIDADDL ERRMWKDRVR LKRIKERQKA GSQGAQTKET PKKISDQAQR KKMSRAQDGI LKYMLKLMEV
101: CKVRGFVYGI IPEKGKPVSG SSDNIRAWWK EKVKFDKNGP AAIAKYEEEC LAFGKSDGNR NSQFVLQDLQ DATLGSLLSS LMQHCDPPQR KYPLEKGTPP
201: PWWPTGNEEW WVKLGLPKSQ SPPYRKPHDL KKMWKVGVLT AVINHMLPDI AKIKRHVRQS KCLQDKMTAK ESAIWLAVLN QEESLIQQPS SDNGNSNVTE
301: THRRGNNADR RKPVVNSDSD YDVDGTEEAS GSVSSKDSRR NQIQKEQPTA ISHSVRDQDK AEKHRRRKRP RIRSGTVNRQ EEEQPEAQQR NILPDMNHVD
401: APLLEYNING THQEDDVVDP NIALGPEDNG LELVVPEFNN NYTYLPLVNE QTMMPVDERP MLYGPNPNQE LQFGSGYNFY NPSAVFVHNQ EDDILHTQIE
501: MNTQAPPHNS GFEEAPGGVL QPLGLLGNED GVTGSELPQY QSGILSPLTD LDFDYGGFGD DFSWFGA
101: CKVRGFVYGI IPEKGKPVSG SSDNIRAWWK EKVKFDKNGP AAIAKYEEEC LAFGKSDGNR NSQFVLQDLQ DATLGSLLSS LMQHCDPPQR KYPLEKGTPP
201: PWWPTGNEEW WVKLGLPKSQ SPPYRKPHDL KKMWKVGVLT AVINHMLPDI AKIKRHVRQS KCLQDKMTAK ESAIWLAVLN QEESLIQQPS SDNGNSNVTE
301: THRRGNNADR RKPVVNSDSD YDVDGTEEAS GSVSSKDSRR NQIQKEQPTA ISHSVRDQDK AEKHRRRKRP RIRSGTVNRQ EEEQPEAQQR NILPDMNHVD
401: APLLEYNING THQEDDVVDP NIALGPEDNG LELVVPEFNN NYTYLPLVNE QTMMPVDERP MLYGPNPNQE LQFGSGYNFY NPSAVFVHNQ EDDILHTQIE
501: MNTQAPPHNS GFEEAPGGVL QPLGLLGNED GVTGSELPQY QSGILSPLTD LDFDYGGFGD DFSWFGA
Arabidopsis Description
EIL3SLIM1 [Source:UniProtKB/TrEMBL;Acc:A0A178VZZ3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.